Protein–RNA interactions for Protein: O60749

SNX2, Sorting nexin-2, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2O60749 MIR181B2-201ENST00000385004 89 ntBASIC0.65□□□□□ -2.31
SNX2O60749 SCARNA23-201ENST00000516060 130 ntBASIC0.65□□□□□ -2.31
SNX2O60749 RNU6-135P-201ENST00000516769 101 ntBASIC0.65□□□□□ -2.31
SNX2O60749 RNU7-161P-201ENST00000517289 62 ntBASIC0.65□□□□□ -2.31
SNX2O60749 MIR4639-201ENST00000584938 69 ntBASIC0.65□□□□□ -2.31
SNX2O60749 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.65□□□□□ -2.31
SNX2O60749 RNU6-1229P-201ENST00000364295 107 ntBASIC0.64□□□□□ -2.31
SNX2O60749 RNU6-755P-201ENST00000364400 103 ntBASIC0.64□□□□□ -2.31
SNX2O60749 RNU6-945P-201ENST00000383947 107 ntBASIC0.64□□□□□ -2.31
SNX2O60749 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.64□□□□□ -2.31
SNX2O60749 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.64□□□□□ -2.31
SNX2O60749 RNU6-1260P-201ENST00000362944 107 ntBASIC0.63□□□□□ -2.31
SNX2O60749 RNA5SP403-201ENST00000363598 108 ntBASIC0.63□□□□□ -2.31
SNX2O60749 RNU6-524P-201ENST00000384270 107 ntBASIC0.63□□□□□ -2.31
SNX2O60749 RNU6-1254P-201ENST00000391266 104 ntBASIC0.63□□□□□ -2.31
SNX2O60749 SCARNA16.5-201ENST00000517114 183 ntBASIC0.63□□□□□ -2.31
SNX2O60749 AC092634.7-201ENST00000621022 103 ntBASIC0.63□□□□□ -2.31
SNX2O60749 RNU6-766P-201ENST00000362478 107 ntBASIC0.62□□□□□ -2.31
SNX2O60749 SNORA8.2-201ENST00000384372 139 ntBASIC0.62□□□□□ -2.31
SNX2O60749 AL031737.1-201ENST00000450125 223 ntBASIC0.62□□□□□ -2.31
SNX2O60749 RN7SKP12-201ENST00000516275 143 ntBASIC0.62□□□□□ -2.31
SNX2O60749 MIR4439-201ENST00000583746 80 ntBASIC0.62□□□□□ -2.31
SNX2O60749 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.62□□□□□ -2.31
SNX2O60749 AC025521.1-201ENST00000621624 286 ntBASIC0.62□□□□□ -2.31
SNX2O60749 MIR6828-201ENST00000636181 60 ntBASIC0.62□□□□□ -2.31
SNX2O60749 RNU6-1113P-201ENST00000384348 107 ntBASIC0.61□□□□□ -2.31
SNX2O60749 RNU6-813P-201ENST00000384691 107 ntBASIC0.61□□□□□ -2.31
SNX2O60749 RNU6-243P-201ENST00000391140 107 ntBASIC0.61□□□□□ -2.31
SNX2O60749 AL161932.1-201ENST00000437408 146 ntBASIC0.61□□□□□ -2.31
SNX2O60749 RNU7-104P-201ENST00000459398 79 ntBASIC0.61□□□□□ -2.31
SNX2O60749 RNA5SP268-201ENST00000516828 124 ntBASIC0.61□□□□□ -2.31
SNX2O60749 SNORA25.18-201ENST00000607153 114 ntBASIC0.61□□□□□ -2.31
SNX2O60749 AC103810.7-201ENST00000607821 91 ntBASIC0.61□□□□□ -2.31
SNX2O60749 uc_338.17-201ENST00000619633 179 ntBASIC0.61□□□□□ -2.31
SNX2O60749 RNU6-1125P-201ENST00000363601 107 ntBASIC0.6□□□□□ -2.31
SNX2O60749 RNU6-480P-201ENST00000384332 107 ntBASIC0.6□□□□□ -2.31
SNX2O60749 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.6□□□□□ -2.31
SNX2O60749 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
SNX2O60749 RNU6-716P-201ENST00000365621 103 ntBASIC0.59□□□□□ -2.31
SNX2O60749 MIR598-201ENST00000384868 97 ntBASIC0.59□□□□□ -2.31
SNX2O60749 MIR92A1-201ENST00000385233 78 ntBASIC0.59□□□□□ -2.31
SNX2O60749 MIR7107-201ENST00000611489 80 ntBASIC0.59□□□□□ -2.31
SNX2O60749 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.59□□□□□ -2.31
SNX2O60749 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.59□□□□□ -2.32
SNX2O60749 RNU6-147P-201ENST00000383983 107 ntBASIC0.58□□□□□ -2.32
SNX2O60749 RNU6-644P-201ENST00000391155 98 ntBASIC0.58□□□□□ -2.32
SNX2O60749 SNORA40.8-201ENST00000411034 126 ntBASIC0.58□□□□□ -2.32
SNX2O60749 snoU13.11-201ENST00000459219 104 ntBASIC0.58□□□□□ -2.32
SNX2O60749 RNA5SP227-201ENST00000516184 113 ntBASIC0.58□□□□□ -2.32
SNX2O60749 AL513043.2-201ENST00000573941 143 ntBASIC0.58□□□□□ -2.32
SNX2O60749 SNORD118-201ENST00000363593 134 ntBASIC0.57□□□□□ -2.32
SNX2O60749 RNU6-957P-201ENST00000363652 99 ntBASIC0.57□□□□□ -2.32
SNX2O60749 RNU6-726P-201ENST00000364680 107 ntBASIC0.57□□□□□ -2.32
SNX2O60749 Y_RNA.466-201ENST00000384294 113 ntBASIC0.57□□□□□ -2.32
SNX2O60749 RNU6-1265P-201ENST00000516342 103 ntBASIC0.57□□□□□ -2.32
SNX2O60749 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.57□□□□□ -2.32
SNX2O60749 Y_RNA.818-201ENST00000618813 71 ntBASIC0.57□□□□□ -2.32
SNX2O60749 RNA5SP347-201ENST00000362445 119 ntBASIC0.56□□□□□ -2.32
SNX2O60749 MIR518A1-201ENST00000385068 85 ntBASIC0.56□□□□□ -2.32
SNX2O60749 RNU6-229P-201ENST00000516614 102 ntBASIC0.56□□□□□ -2.32
SNX2O60749 MIR6513-201ENST00000621188 64 ntBASIC0.56□□□□□ -2.32
SNX2O60749 AC067863.3-201ENST00000624172 122 ntBASIC0.56□□□□□ -2.32
SNX2O60749 AC098934.3-201ENST00000430450 190 ntBASIC0.55□□□□□ -2.32
SNX2O60749 RNU7-61P-201ENST00000515897 61 ntBASIC0.55□□□□□ -2.32
SNX2O60749 SNORA68.3-201ENST00000515906 83 ntBASIC0.55□□□□□ -2.32
SNX2O60749 MIR3920-201ENST00000581751 86 ntBASIC0.55□□□□□ -2.32
SNX2O60749 PVT1_3.1-201ENST00000620853 95 ntBASIC0.55□□□□□ -2.32
SNX2O60749 TRDV1-202ENST00000621643 102 ntBASIC0.55□□□□□ -2.32
SNX2O60749 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
SNX2O60749 Y_RNA.93-201ENST00000363066 109 ntBASIC0.54□□□□□ -2.32
SNX2O60749 Y_RNA.107-201ENST00000363190 121 ntBASIC0.54□□□□□ -2.32
SNX2O60749 RNA5SP499-201ENST00000363982 119 ntBASIC0.54□□□□□ -2.32
SNX2O60749 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.54□□□□□ -2.32
SNX2O60749 AC069271.1-201ENST00000445577 156 ntBASIC0.54□□□□□ -2.32
SNX2O60749 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.54□□□□□ -2.32
SNX2O60749 Y_RNA.544-201ENST00000384650 113 ntBASIC0.53□□□□□ -2.32
SNX2O60749 MIR548L-201ENST00000408303 86 ntBASIC0.53□□□□□ -2.32
SNX2O60749 Y_RNA.705-201ENST00000516862 110 ntBASIC0.53□□□□□ -2.32
SNX2O60749 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.53□□□□□ -2.32
SNX2O60749 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC0.53□□□□□ -2.32
SNX2O60749 SNORD41.1-201ENST00000391000 69 ntBASIC0.52□□□□□ -2.33
SNX2O60749 SNORD71-201ENST00000411292 86 ntBASIC0.52□□□□□ -2.33
SNX2O60749 MTATP8P2-201ENST00000435212 202 ntBASIC0.52□□□□□ -2.33
SNX2O60749 Y_RNA.648-201ENST00000459455 110 ntBASIC0.52□□□□□ -2.33
SNX2O60749 RNU7-13P-201ENST00000516413 62 ntBASIC0.52□□□□□ -2.33
SNX2O60749 AP001318.4-201ENST00000616637 121 ntBASIC0.52□□□□□ -2.33
SNX2O60749 U6.100-201ENST00000636230 99 ntBASIC0.52□□□□□ -2.33
SNX2O60749 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.52□□□□□ -2.33
SNX2O60749 Y_RNA.283-201ENST00000364798 112 ntBASIC0.51□□□□□ -2.33
SNX2O60749 RNU6-972P-201ENST00000391208 107 ntBASIC0.51□□□□□ -2.33
SNX2O60749 MIR936-201ENST00000401264 98 ntBASIC0.51□□□□□ -2.33
SNX2O60749 RNU6-887P-201ENST00000410660 100 ntBASIC0.51□□□□□ -2.33
SNX2O60749 AL157398.1-201ENST00000452981 186 ntBASIC0.51□□□□□ -2.33
SNX2O60749 RNU6-162P-201ENST00000516228 103 ntBASIC0.51□□□□□ -2.33
SNX2O60749 MIR4752-201ENST00000579672 72 ntBASIC0.51□□□□□ -2.33
SNX2O60749 AC243829.3-201ENST00000622177 108 ntBASIC0.51□□□□□ -2.33
SNX2O60749 MIR5087-201ENST00000635826 76 ntBASIC0.51□□□□□ -2.33
SNX2O60749 Y_RNA.81-201ENST00000362997 102 ntBASIC0.5□□□□□ -2.33
SNX2O60749 SNORD44.1-201ENST00000363202 61 ntBASIC0.5□□□□□ -2.33
SNX2O60749 SNORD58A-201ENST00000383875 65 ntBASIC0.5□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 199.2 ms