Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 Y_RNA.540-201ENST00000384638 111 ntBASIC2.4□□□□□ -2.03
GFRA3O60609 MIR125B2-201ENST00000385128 89 ntBASIC2.4□□□□□ -2.03
GFRA3O60609 RNU6-1246P-201ENST00000391064 107 ntBASIC2.4□□□□□ -2.03
GFRA3O60609 SNORD83.1-201ENST00000411362 77 ntBASIC2.4□□□□□ -2.03
GFRA3O60609 AL133373.1-201ENST00000497098 94 ntBASIC2.4□□□□□ -2.03
GFRA3O60609 MIR3126-201ENST00000577443 74 ntBASIC2.4□□□□□ -2.03
GFRA3O60609 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.4□□□□□ -2.03
GFRA3O60609 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
GFRA3O60609 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.39□□□□□ -2.03
GFRA3O60609 RN7SKP123-201ENST00000410732 291 ntBASIC2.39□□□□□ -2.03
GFRA3O60609 RNA5SP385-201ENST00000515947 110 ntBASIC2.39□□□□□ -2.03
GFRA3O60609 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
GFRA3O60609 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.38□□□□□ -2.03
GFRA3O60609 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
GFRA3O60609 RNA5SP325-201ENST00000363756 130 ntBASIC2.38□□□□□ -2.03
GFRA3O60609 SNORD116-16-201ENST00000384533 92 ntBASIC2.38□□□□□ -2.03
GFRA3O60609 AL161935.2-201ENST00000414627 60 ntBASIC2.38□□□□□ -2.03
GFRA3O60609 RPS29P6-201ENST00000438196 145 ntBASIC2.38□□□□□ -2.03
GFRA3O60609 SNORA31.17-201ENST00000516953 127 ntBASIC2.38□□□□□ -2.03
GFRA3O60609 MIR4490-201ENST00000582647 84 ntBASIC2.38□□□□□ -2.03
GFRA3O60609 AL359821.1-201ENST00000605519 182 ntBASIC2.38□□□□□ -2.03
GFRA3O60609 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.37□□□□□ -2.03
GFRA3O60609 RNA5SP264-201ENST00000363115 107 ntBASIC2.37□□□□□ -2.03
GFRA3O60609 Y_RNA.125-201ENST00000363371 111 ntBASIC2.37□□□□□ -2.03
GFRA3O60609 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
GFRA3O60609 RNU7-161P-201ENST00000517289 62 ntBASIC2.37□□□□□ -2.03
GFRA3O60609 MIR3605-201ENST00000583214 100 ntBASIC2.37□□□□□ -2.03
GFRA3O60609 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
GFRA3O60609 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.36□□□□□ -2.03
GFRA3O60609 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
GFRA3O60609 SNORA9.1-201ENST00000362412 131 ntBASIC2.36□□□□□ -2.03
GFRA3O60609 RNU6-924P-201ENST00000362926 108 ntBASIC2.36□□□□□ -2.03
GFRA3O60609 RNA5SP259-201ENST00000365541 109 ntBASIC2.36□□□□□ -2.03
GFRA3O60609 SNORD88.1-201ENST00000408684 91 ntBASIC2.36□□□□□ -2.03
GFRA3O60609 Y_RNA.633-201ENST00000459107 95 ntBASIC2.36□□□□□ -2.03
GFRA3O60609 MIR548AL-201ENST00000578416 97 ntBASIC2.36□□□□□ -2.03
GFRA3O60609 MIR6845-201ENST00000613182 61 ntBASIC2.36□□□□□ -2.03
GFRA3O60609 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.35□□□□□ -2.03
GFRA3O60609 MIR103A2-201ENST00000362154 78 ntBASIC2.35□□□□□ -2.03
GFRA3O60609 SNORA33.1-201ENST00000364957 130 ntBASIC2.35□□□□□ -2.03
GFRA3O60609 UBBP3-201ENST00000445497 241 ntBASIC2.35□□□□□ -2.03
GFRA3O60609 RNU6-250P-201ENST00000516958 103 ntBASIC2.35□□□□□ -2.03
GFRA3O60609 MIR219B-201ENST00000637023 88 ntBASIC2.35□□□□□ -2.03
GFRA3O60609 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
GFRA3O60609 MIR513A1-201ENST00000385138 129 ntBASIC2.34□□□□□ -2.03
GFRA3O60609 GHRLOS.1-201ENST00000610995 70 ntBASIC2.34□□□□□ -2.03
GFRA3O60609 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
GFRA3O60609 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
GFRA3O60609 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
GFRA3O60609 RNU6-934P-201ENST00000365154 107 ntBASIC2.33□□□□□ -2.04
GFRA3O60609 SNORA67.3-201ENST00000384366 140 ntBASIC2.33□□□□□ -2.04
GFRA3O60609 SNORA17.3-201ENST00000391159 129 ntBASIC2.33□□□□□ -2.04
GFRA3O60609 AC138207.3-201ENST00000585289 166 ntBASIC2.33□□□□□ -2.04
GFRA3O60609 MIR1291-201ENST00000627649 87 ntBASIC2.33□□□□□ -2.04
GFRA3O60609 SNORD115-24-201ENST00000363528 82 ntBASIC2.32□□□□□ -2.04
GFRA3O60609 AC026436.1-201ENST00000510537 270 ntBASIC2.32□□□□□ -2.04
GFRA3O60609 RNU6-947P-201ENST00000516264 106 ntBASIC2.32□□□□□ -2.04
GFRA3O60609 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC2.32□□□□□ -2.04
GFRA3O60609 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
GFRA3O60609 AC131280.1-202ENST00000624067 4211 ntBASIC2.31□□□□□ -2.04
GFRA3O60609 Y_RNA.74-201ENST00000362911 99 ntBASIC2.31□□□□□ -2.04
GFRA3O60609 SNORA15B-2-201ENST00000384058 135 ntBASIC2.31□□□□□ -2.04
GFRA3O60609 SNORA15B-1-201ENST00000384334 135 ntBASIC2.31□□□□□ -2.04
GFRA3O60609 MT-TY-201ENST00000387409 66 ntBASIC2.31□□□□□ -2.04
GFRA3O60609 RNU7-74P-201ENST00000459104 62 ntBASIC2.31□□□□□ -2.04
GFRA3O60609 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
GFRA3O60609 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
GFRA3O60609 MIR583-201ENST00000384846 75 ntBASIC2.3□□□□□ -2.04
GFRA3O60609 MIR4771-2-201ENST00000577758 74 ntBASIC2.3□□□□□ -2.04
GFRA3O60609 MIR4771-1-201ENST00000582617 74 ntBASIC2.3□□□□□ -2.04
GFRA3O60609 MIR6733-201ENST00000635723 61 ntBASIC2.3□□□□□ -2.04
GFRA3O60609 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
GFRA3O60609 Y_RNA.282-201ENST00000364793 102 ntBASIC2.29□□□□□ -2.04
GFRA3O60609 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC2.29□□□□□ -2.04
GFRA3O60609 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
GFRA3O60609 SNORA25.8-201ENST00000364831 128 ntBASIC2.28□□□□□ -2.04
GFRA3O60609 RNU1-51P-201ENST00000365345 176 ntBASIC2.28□□□□□ -2.04
GFRA3O60609 SNORA31.14-201ENST00000516728 116 ntBASIC2.28□□□□□ -2.04
GFRA3O60609 U1.36-201ENST00000620684 176 ntBASIC2.28□□□□□ -2.04
GFRA3O60609 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.28□□□□□ -2.05
GFRA3O60609 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
GFRA3O60609 RNA5SP456-201ENST00000364002 114 ntBASIC2.27□□□□□ -2.05
GFRA3O60609 RNU6-42P-201ENST00000384165 107 ntBASIC2.27□□□□□ -2.05
GFRA3O60609 RNU6-172P-201ENST00000411000 93 ntBASIC2.27□□□□□ -2.05
GFRA3O60609 RNA5SP270-201ENST00000411361 118 ntBASIC2.27□□□□□ -2.05
GFRA3O60609 RNU1-123P-201ENST00000458950 160 ntBASIC2.27□□□□□ -2.05
GFRA3O60609 RNU7-104P-201ENST00000459398 79 ntBASIC2.27□□□□□ -2.05
GFRA3O60609 MIR6779-201ENST00000617283 64 ntBASIC2.27□□□□□ -2.05
GFRA3O60609 uc_338.16-201ENST00000621804 95 ntBASIC2.27□□□□□ -2.05
GFRA3O60609 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.27□□□□□ -2.05
GFRA3O60609 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
GFRA3O60609 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
GFRA3O60609 Y_RNA.32-201ENST00000362589 110 ntBASIC2.26□□□□□ -2.05
GFRA3O60609 RNU4ATAC4P-201ENST00000516307 126 ntBASIC2.26□□□□□ -2.05
GFRA3O60609 MIR4676-201ENST00000583078 72 ntBASIC2.26□□□□□ -2.05
GFRA3O60609 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
GFRA3O60609 SNORD1B-201ENST00000363091 84 ntBASIC2.25□□□□□ -2.05
GFRA3O60609 RNU6-56P-201ENST00000516986 93 ntBASIC2.25□□□□□ -2.05
GFRA3O60609 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
GFRA3O60609 SNORD114-4-201ENST00000363962 75 ntBASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms