Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 MIR3662-201ENST00000637030 95 ntBASIC-2.39□□□□□ -2.79
SSSCA1O60232 AC068137.3-201ENST00000639191 341 ntBASIC-2.39□□□□□ -2.79
SSSCA1O60232 RNU6-824P-201ENST00000363724 104 ntBASIC-2.4□□□□□ -2.79
SSSCA1O60232 RNU6-978P-201ENST00000364371 103 ntBASIC-2.4□□□□□ -2.79
SSSCA1O60232 RNU6-937P-201ENST00000384325 106 ntBASIC-2.4□□□□□ -2.79
SSSCA1O60232 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC-2.4□□□□□ -2.79
SSSCA1O60232 RNU7-123P-201ENST00000515911 60 ntBASIC-2.4□□□□□ -2.79
SSSCA1O60232 RNU6-803P-201ENST00000516034 102 ntBASIC-2.4□□□□□ -2.79
SSSCA1O60232 RNU6-561P-201ENST00000516222 102 ntBASIC-2.4□□□□□ -2.79
SSSCA1O60232 RNU6-864P-201ENST00000516256 108 ntBASIC-2.4□□□□□ -2.79
SSSCA1O60232 RNU6-1234P-201ENST00000516877 103 ntBASIC-2.4□□□□□ -2.79
SSSCA1O60232 MIR3140-201ENST00000583685 90 ntBASIC-2.4□□□□□ -2.79
SSSCA1O60232 AC013734.1-201ENST00000619329 111 ntBASIC-2.4□□□□□ -2.79
SSSCA1O60232 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-2.4□□□□□ -2.79
SSSCA1O60232 Y_RNA.152-201ENST00000363578 100 ntBASIC-2.41□□□□□ -2.8
SSSCA1O60232 Y_RNA.169-201ENST00000363745 96 ntBASIC-2.41□□□□□ -2.8
SSSCA1O60232 Y_RNA.299-201ENST00000364973 94 ntBASIC-2.41□□□□□ -2.8
SSSCA1O60232 Y_RNA.519-201ENST00000384553 102 ntBASIC-2.41□□□□□ -2.8
SSSCA1O60232 MIR548A1-201ENST00000385041 97 ntBASIC-2.41□□□□□ -2.8
SSSCA1O60232 MIR122-201ENST00000385044 85 ntBASIC-2.41□□□□□ -2.8
SSSCA1O60232 MTND1P1-201ENST00000445453 368 ntBASIC-2.41□□□□□ -2.8
SSSCA1O60232 Y_RNA.647-201ENST00000459194 112 ntBASIC-2.41□□□□□ -2.8
SSSCA1O60232 Y_RNA.640-201ENST00000459296 112 ntBASIC-2.41□□□□□ -2.8
SSSCA1O60232 RNU6-566P-201ENST00000516790 107 ntBASIC-2.41□□□□□ -2.8
SSSCA1O60232 Y_RNA.701-201ENST00000516812 110 ntBASIC-2.41□□□□□ -2.8
SSSCA1O60232 Y_RNA.721-201ENST00000517207 102 ntBASIC-2.41□□□□□ -2.8
SSSCA1O60232 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC-2.41□□□□□ -2.8
SSSCA1O60232 Y_RNA.803-201ENST00000614432 112 ntBASIC-2.41□□□□□ -2.8
SSSCA1O60232 Y_RNA.815-201ENST00000616655 112 ntBASIC-2.41□□□□□ -2.8
SSSCA1O60232 PISRT1.1-201ENST00000616930 107 ntBASIC-2.41□□□□□ -2.8
SSSCA1O60232 Y_RNA.795-201ENST00000619475 112 ntBASIC-2.41□□□□□ -2.8
SSSCA1O60232 Y_RNA.827-201ENST00000638104 112 ntBASIC-2.41□□□□□ -2.8
SSSCA1O60232 MIRLET7F1-201ENST00000362202 87 ntBASIC-2.42□□□□□ -2.8
SSSCA1O60232 Y_RNA.8-201ENST00000362353 102 ntBASIC-2.42□□□□□ -2.8
SSSCA1O60232 RNU6-1272P-201ENST00000362776 107 ntBASIC-2.42□□□□□ -2.8
SSSCA1O60232 Y_RNA.199-201ENST00000364014 102 ntBASIC-2.42□□□□□ -2.8
SSSCA1O60232 SNORA75-201ENST00000384158 137 ntBASIC-2.42□□□□□ -2.8
SSSCA1O60232 Y_RNA.599-201ENST00000410489 109 ntBASIC-2.42□□□□□ -2.8
SSSCA1O60232 MTND2P14-201ENST00000482139 351 ntBASIC-2.42□□□□□ -2.8
SSSCA1O60232 RNU6-453P-201ENST00000516819 85 ntBASIC-2.42□□□□□ -2.8
SSSCA1O60232 AC006006.1-201ENST00000603082 144 ntBASIC-2.42□□□□□ -2.8
SSSCA1O60232 C8orf59P2-201ENST00000603441 271 ntBASIC-2.42□□□□□ -2.8
SSSCA1O60232 AP000720.1-201ENST00000625091 483 ntBASIC-2.42□□□□□ -2.8
SSSCA1O60232 Y_RNA.51-201ENST00000362725 102 ntBASIC-2.43□□□□□ -2.8
SSSCA1O60232 SNORA15B-2-201ENST00000384058 135 ntBASIC-2.43□□□□□ -2.8
SSSCA1O60232 SNORA15B-1-201ENST00000384334 135 ntBASIC-2.43□□□□□ -2.8
SSSCA1O60232 RNU6-1177P-201ENST00000391058 104 ntBASIC-2.43□□□□□ -2.8
SSSCA1O60232 IGHVII-40-1-201ENST00000517316 58 ntBASIC-2.43□□□□□ -2.8
SSSCA1O60232 RNU6-1214P-201ENST00000363650 109 ntBASIC-2.44□□□□□ -2.8
SSSCA1O60232 RNU7-164P-201ENST00000459221 62 ntBASIC-2.44□□□□□ -2.8
SSSCA1O60232 RNU6-518P-201ENST00000516056 96 ntBASIC-2.44□□□□□ -2.8
SSSCA1O60232 RNU6-861P-201ENST00000516745 106 ntBASIC-2.44□□□□□ -2.8
SSSCA1O60232 SCARNA24.2-201ENST00000516968 130 ntBASIC-2.44□□□□□ -2.8
SSSCA1O60232 MIR5688-201ENST00000580619 83 ntBASIC-2.44□□□□□ -2.8
SSSCA1O60232 AC012531.4-201ENST00000616509 177 ntBASIC-2.44□□□□□ -2.8
SSSCA1O60232 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-2.44□□□□□ -2.8
SSSCA1O60232 Y_RNA.420-201ENST00000384043 110 ntBASIC-2.45□□□□□ -2.8
SSSCA1O60232 SNORA24B-201ENST00000384176 131 ntBASIC-2.45□□□□□ -2.8
SSSCA1O60232 SNORD38.2-201ENST00000384470 69 ntBASIC-2.45□□□□□ -2.8
SSSCA1O60232 Y_RNA.512-201ENST00000384518 102 ntBASIC-2.45□□□□□ -2.8
SSSCA1O60232 RNU6-332P-201ENST00000391193 108 ntBASIC-2.45□□□□□ -2.8
SSSCA1O60232 RBMX2P4-201ENST00000441256 376 ntBASIC-2.45□□□□□ -2.8
SSSCA1O60232 RNU6-240P-201ENST00000516098 97 ntBASIC-2.45□□□□□ -2.8
SSSCA1O60232 RNU6-521P-201ENST00000516663 105 ntBASIC-2.45□□□□□ -2.8
SSSCA1O60232 MIR5693-201ENST00000577722 73 ntBASIC-2.45□□□□□ -2.8
SSSCA1O60232 AC040904.1-201ENST00000590850 223 ntBASIC-2.45□□□□□ -2.8
SSSCA1O60232 AC092794.1-201ENST00000612734 582 ntBASIC-2.45□□□□□ -2.8
SSSCA1O60232 AC048344.4-201ENST00000619744 527 ntBASIC-2.45□□□□□ -2.8
SSSCA1O60232 AC090617.10-201ENST00000624308 134 ntBASIC-2.45□□□□□ -2.8
SSSCA1O60232 AC138305.3-201ENST00000624988 240 ntBASIC-2.45□□□□□ -2.8
SSSCA1O60232 Y_RNA.176-201ENST00000363815 109 ntBASIC-2.46□□□□□ -2.8
SSSCA1O60232 RNU6-682P-201ENST00000363843 106 ntBASIC-2.46□□□□□ -2.8
SSSCA1O60232 MIR203A-201ENST00000384836 110 ntBASIC-2.46□□□□□ -2.8
SSSCA1O60232 MIR624-201ENST00000385217 97 ntBASIC-2.46□□□□□ -2.8
SSSCA1O60232 MTND3P10-201ENST00000450967 341 ntBASIC-2.46□□□□□ -2.8
SSSCA1O60232 RNU6-1016P-201ENST00000516689 94 ntBASIC-2.46□□□□□ -2.8
SSSCA1O60232 RNU6-1121P-201ENST00000516802 109 ntBASIC-2.46□□□□□ -2.8
SSSCA1O60232 AC021443.1-201ENST00000604478 211 ntBASIC-2.46□□□□□ -2.8
SSSCA1O60232 AF246928.1-201ENST00000623768 87 ntBASIC-2.46□□□□□ -2.8
SSSCA1O60232 RNU6-260P-201ENST00000384092 107 ntBASIC-2.47□□□□□ -2.8
SSSCA1O60232 SNORD63-201ENST00000384262 68 ntBASIC-2.47□□□□□ -2.8
SSSCA1O60232 RNU7-24P-201ENST00000458867 62 ntBASIC-2.47□□□□□ -2.8
SSSCA1O60232 MTND5P5-201ENST00000503764 376 ntBASIC-2.47□□□□□ -2.8
SSSCA1O60232 Y_RNA.658-201ENST00000515990 97 ntBASIC-2.47□□□□□ -2.8
SSSCA1O60232 RNA5SP236-201ENST00000516169 116 ntBASIC-2.47□□□□□ -2.8
SSSCA1O60232 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-2.47□□□□□ -2.8
SSSCA1O60232 MIR4528-201ENST00000577763 90 ntBASIC-2.47□□□□□ -2.8
SSSCA1O60232 AC018645.2-201ENST00000609151 472 ntBASIC-2.47□□□□□ -2.8
SSSCA1O60232 U2.1-201ENST00000618978 145 ntBASIC-2.47□□□□□ -2.8
SSSCA1O60232 U6.97-201ENST00000636904 101 ntBASIC-2.47□□□□□ -2.8
SSSCA1O60232 snoU2_19.4-201ENST00000364329 80 ntBASIC-2.48□□□□□ -2.81
SSSCA1O60232 RNU6-1148P-201ENST00000410992 104 ntBASIC-2.48□□□□□ -2.81
SSSCA1O60232 AC096644.2-201ENST00000429278 159 ntBASIC-2.48□□□□□ -2.81
SSSCA1O60232 RNU6-1213P-201ENST00000517075 94 ntBASIC-2.48□□□□□ -2.81
SSSCA1O60232 Y_RNA.773-201ENST00000607168 90 ntBASIC-2.48□□□□□ -2.81
SSSCA1O60232 SNORA63.2-201ENST00000362603 126 ntBASIC-2.49□□□□□ -2.81
SSSCA1O60232 Y_RNA.566-201ENST00000384735 101 ntBASIC-2.49□□□□□ -2.81
SSSCA1O60232 Y_RNA.793-201ENST00000411222 111 ntBASIC-2.49□□□□□ -2.81
SSSCA1O60232 AL445567.1-201ENST00000439121 144 ntBASIC-2.49□□□□□ -2.81
SSSCA1O60232 Y_RNA.394-201ENST00000383942 103 ntBASIC-2.5□□□□□ -2.81
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms