Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 AP003327.1-201ENST00000529684 127 ntBASIC1.03□□□□□ -2.24
PROM1O43490 MIR4295-201ENST00000585286 85 ntBASIC1.03□□□□□ -2.24
PROM1O43490 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.03□□□□□ -2.25
PROM1O43490 Y_RNA.17-201ENST00000362433 111 ntBASIC1.02□□□□□ -2.25
PROM1O43490 SNORD73B-201ENST00000364394 72 ntBASIC1.02□□□□□ -2.25
PROM1O43490 SNORD114-24-201ENST00000365029 72 ntBASIC1.02□□□□□ -2.25
PROM1O43490 RNY1P4-201ENST00000384595 115 ntBASIC1.02□□□□□ -2.25
PROM1O43490 SNORD105-201ENST00000386910 85 ntBASIC1.02□□□□□ -2.25
PROM1O43490 Y_RNA.809-201ENST00000516058 95 ntBASIC1.02□□□□□ -2.25
PROM1O43490 RNU6-762P-201ENST00000517107 102 ntBASIC1.02□□□□□ -2.25
PROM1O43490 AC103810.9-201ENST00000606688 112 ntBASIC1.02□□□□□ -2.25
PROM1O43490 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
PROM1O43490 SNORD36A-201ENST00000362874 73 ntBASIC1.01□□□□□ -2.25
PROM1O43490 RNU6-402P-201ENST00000410678 103 ntBASIC1.01□□□□□ -2.25
PROM1O43490 AC138907.6-201ENST00000568401 126 ntBASIC1.01□□□□□ -2.25
PROM1O43490 AC138869.1-201ENST00000568623 124 ntBASIC1.01□□□□□ -2.25
PROM1O43490 MIR494-201ENST00000349529 81 ntBASIC1□□□□□ -2.25
PROM1O43490 RNA5SP245-201ENST00000364239 121 ntBASIC1□□□□□ -2.25
PROM1O43490 Y_RNA.593-201ENST00000410292 98 ntBASIC1□□□□□ -2.25
PROM1O43490 snoU13.11-201ENST00000459219 104 ntBASIC1□□□□□ -2.25
PROM1O43490 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1□□□□□ -2.25
PROM1O43490 RNA5SP436-201ENST00000516020 115 ntBASIC1□□□□□ -2.25
PROM1O43490 MIR4668-201ENST00000582284 70 ntBASIC1□□□□□ -2.25
PROM1O43490 RN7SL793P-201ENST00000583259 296 ntBASIC1□□□□□ -2.25
PROM1O43490 SNORD114-21-201ENST00000606412 72 ntBASIC1□□□□□ -2.25
PROM1O43490 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1□□□□□ -2.25
PROM1O43490 IGLL4P-201ENST00000614590 133 ntBASIC1□□□□□ -2.25
PROM1O43490 RNA5SP117-201ENST00000365294 118 ntBASIC0.99□□□□□ -2.25
PROM1O43490 RNU6-1335P-201ENST00000365426 107 ntBASIC0.99□□□□□ -2.25
PROM1O43490 MIR450A2-201ENST00000385022 100 ntBASIC0.99□□□□□ -2.25
PROM1O43490 MIR599-201ENST00000385069 95 ntBASIC0.99□□□□□ -2.25
PROM1O43490 RNU6-466P-201ENST00000391224 103 ntBASIC0.99□□□□□ -2.25
PROM1O43490 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.99□□□□□ -2.25
PROM1O43490 Y_RNA.32-201ENST00000362589 110 ntBASIC0.98□□□□□ -2.25
PROM1O43490 RNY1P1-201ENST00000364372 112 ntBASIC0.98□□□□□ -2.25
PROM1O43490 MIR216A-201ENST00000385063 110 ntBASIC0.98□□□□□ -2.25
PROM1O43490 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.98□□□□□ -2.25
PROM1O43490 AC097635.1-201ENST00000450678 155 ntBASIC0.98□□□□□ -2.25
PROM1O43490 Y_RNA.648-201ENST00000459455 110 ntBASIC0.98□□□□□ -2.25
PROM1O43490 SNORA31.14-201ENST00000516728 116 ntBASIC0.98□□□□□ -2.25
PROM1O43490 Y_RNA.174-201ENST00000363781 105 ntBASIC0.97□□□□□ -2.25
PROM1O43490 RNU6-524P-201ENST00000384270 107 ntBASIC0.97□□□□□ -2.25
PROM1O43490 SNORA26.2-201ENST00000390922 122 ntBASIC0.97□□□□□ -2.25
PROM1O43490 AL161932.1-201ENST00000437408 146 ntBASIC0.97□□□□□ -2.25
PROM1O43490 RNU6-65P-201ENST00000516332 98 ntBASIC0.97□□□□□ -2.25
PROM1O43490 RNU6-267P-201ENST00000516714 103 ntBASIC0.97□□□□□ -2.25
PROM1O43490 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.97□□□□□ -2.25
PROM1O43490 AC025627.3-201ENST00000582078 182 ntBASIC0.97□□□□□ -2.25
PROM1O43490 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.97□□□□□ -2.25
PROM1O43490 RNU6-957P-201ENST00000363652 99 ntBASIC0.96□□□□□ -2.26
PROM1O43490 AC002350.1-201ENST00000490759 375 ntBASIC0.96□□□□□ -2.26
PROM1O43490 RNA5SP255-201ENST00000516370 107 ntBASIC0.96□□□□□ -2.26
PROM1O43490 MIR4536-1-201ENST00000583537 88 ntBASIC0.96□□□□□ -2.26
PROM1O43490 AC062037.1-201ENST00000605302 128 ntBASIC0.96□□□□□ -2.26
PROM1O43490 uc_338.16-201ENST00000621804 95 ntBASIC0.96□□□□□ -2.26
PROM1O43490 RNU6-1260P-201ENST00000362944 107 ntBASIC0.95□□□□□ -2.26
PROM1O43490 RNU4-32P-201ENST00000363404 141 ntBASIC0.95□□□□□ -2.26
PROM1O43490 Y_RNA.221-201ENST00000364248 96 ntBASIC0.95□□□□□ -2.26
PROM1O43490 RNU4-38P-201ENST00000364472 129 ntBASIC0.95□□□□□ -2.26
PROM1O43490 RNU6-1187P-201ENST00000364771 110 ntBASIC0.95□□□□□ -2.26
PROM1O43490 Y_RNA.283-201ENST00000364798 112 ntBASIC0.95□□□□□ -2.26
PROM1O43490 MIR519A1-201ENST00000385257 85 ntBASIC0.95□□□□□ -2.26
PROM1O43490 Y_RNA.620-201ENST00000411009 88 ntBASIC0.95□□□□□ -2.26
PROM1O43490 RNU7-85P-201ENST00000458851 63 ntBASIC0.95□□□□□ -2.26
PROM1O43490 SNORD4B-201ENST00000459083 72 ntBASIC0.95□□□□□ -2.26
PROM1O43490 RNU6-469P-201ENST00000516253 101 ntBASIC0.95□□□□□ -2.26
PROM1O43490 snoMBII-202.2-201ENST00000517263 86 ntBASIC0.95□□□□□ -2.26
PROM1O43490 MIR5000-201ENST00000577717 103 ntBASIC0.95□□□□□ -2.26
PROM1O43490 Y_RNA.68-201ENST00000362881 102 ntBASIC0.94□□□□□ -2.26
PROM1O43490 Y_RNA.73-201ENST00000362910 113 ntBASIC0.94□□□□□ -2.26
PROM1O43490 RNU6-219P-201ENST00000364728 107 ntBASIC0.94□□□□□ -2.26
PROM1O43490 MIR573-201ENST00000384964 99 ntBASIC0.94□□□□□ -2.26
PROM1O43490 SNORD99-201ENST00000408612 74 ntBASIC0.94□□□□□ -2.26
PROM1O43490 MIR1302-4-201ENST00000408701 150 ntBASIC0.94□□□□□ -2.26
PROM1O43490 RNY4P29-201ENST00000410801 97 ntBASIC0.94□□□□□ -2.26
PROM1O43490 RPL39P28-201ENST00000465655 155 ntBASIC0.94□□□□□ -2.26
PROM1O43490 SNORA72.7-201ENST00000516349 94 ntBASIC0.94□□□□□ -2.26
PROM1O43490 AC011195.1-201ENST00000578177 177 ntBASIC0.94□□□□□ -2.26
PROM1O43490 TRDV1-202ENST00000621643 102 ntBASIC0.94□□□□□ -2.26
PROM1O43490 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.94□□□□□ -2.26
PROM1O43490 MIR644A-201ENST00000385262 94 ntBASIC0.93□□□□□ -2.26
PROM1O43490 RN7SKP12-201ENST00000516275 143 ntBASIC0.93□□□□□ -2.26
PROM1O43490 MIR3612-201ENST00000579753 87 ntBASIC0.93□□□□□ -2.26
PROM1O43490 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.93□□□□□ -2.26
PROM1O43490 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.92□□□□□ -2.26
PROM1O43490 MIR373-201ENST00000362273 69 ntBASIC0.92□□□□□ -2.26
PROM1O43490 SNORD115-24-201ENST00000363528 82 ntBASIC0.92□□□□□ -2.26
PROM1O43490 RNA5SP457-201ENST00000363657 124 ntBASIC0.92□□□□□ -2.26
PROM1O43490 RNU6-820P-201ENST00000384273 107 ntBASIC0.92□□□□□ -2.26
PROM1O43490 MIR193B-201ENST00000384907 83 ntBASIC0.92□□□□□ -2.26
PROM1O43490 Y_RNA.611-201ENST00000410682 108 ntBASIC0.92□□□□□ -2.26
PROM1O43490 AL606490.4-201ENST00000423117 127 ntBASIC0.92□□□□□ -2.26
PROM1O43490 AC244505.6-201ENST00000452829 130 ntBASIC0.92□□□□□ -2.26
PROM1O43490 RNU6ATAC17P-201ENST00000516074 71 ntBASIC0.92□□□□□ -2.26
PROM1O43490 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.92□□□□□ -2.26
PROM1O43490 AC211469.2-201ENST00000605461 205 ntBASIC0.92□□□□□ -2.26
PROM1O43490 SNORD115-27-201ENST00000364430 82 ntBASIC0.91□□□□□ -2.26
PROM1O43490 RNU6-675P-201ENST00000384236 104 ntBASIC0.91□□□□□ -2.26
PROM1O43490 AC022137.1-201ENST00000483735 151 ntBASIC0.91□□□□□ -2.26
PROM1O43490 RNU6-633P-201ENST00000362612 103 ntBASIC0.9□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 185.1 ms