Protein–RNA interactions for Protein: O43474

KLF4, Krueppel-like factor 4, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLF4O43474 SNORD18A-201ENST00000363753 72 ntBASIC0.93□□□□□ -2.26
KLF4O43474 Y_RNA.221-201ENST00000364248 96 ntBASIC0.93□□□□□ -2.26
KLF4O43474 RNU6-42P-201ENST00000384165 107 ntBASIC0.93□□□□□ -2.26
KLF4O43474 SNORD28-201ENST00000384706 75 ntBASIC0.93□□□□□ -2.26
KLF4O43474 MIR4653-201ENST00000585107 83 ntBASIC0.93□□□□□ -2.26
KLF4O43474 SNORD116-10-201ENST00000363791 102 ntBASIC0.92□□□□□ -2.26
KLF4O43474 MTATP6P29-201ENST00000415057 132 ntBASIC0.92□□□□□ -2.26
KLF4O43474 RNU6-1187P-201ENST00000364771 110 ntBASIC0.91□□□□□ -2.26
KLF4O43474 RNU6-524P-201ENST00000384270 107 ntBASIC0.91□□□□□ -2.26
KLF4O43474 MIR548L-201ENST00000408303 86 ntBASIC0.91□□□□□ -2.26
KLF4O43474 RPS29P1-201ENST00000465274 159 ntBASIC0.91□□□□□ -2.26
KLF4O43474 AL513043.2-201ENST00000573941 143 ntBASIC0.91□□□□□ -2.26
KLF4O43474 AC025521.1-201ENST00000621624 286 ntBASIC0.91□□□□□ -2.26
KLF4O43474 RNU4-38P-201ENST00000364472 129 ntBASIC0.9□□□□□ -2.27
KLF4O43474 SNORD58A-201ENST00000383875 65 ntBASIC0.9□□□□□ -2.27
KLF4O43474 Y_RNA.648-201ENST00000459455 110 ntBASIC0.9□□□□□ -2.27
KLF4O43474 RNA5SP94-201ENST00000516917 108 ntBASIC0.9□□□□□ -2.27
KLF4O43474 SCARNA16.5-201ENST00000517114 183 ntBASIC0.9□□□□□ -2.27
KLF4O43474 AL590095.2-201ENST00000604136 117 ntBASIC0.9□□□□□ -2.27
KLF4O43474 MIR6734-201ENST00000621166 68 ntBASIC0.9□□□□□ -2.27
KLF4O43474 AC244669.1-204ENST00000621564 178 ntBASIC0.9□□□□□ -2.27
KLF4O43474 RPL39P28-201ENST00000465655 155 ntBASIC0.89□□□□□ -2.27
KLF4O43474 RNA5SP47-201ENST00000517230 109 ntBASIC0.89□□□□□ -2.27
KLF4O43474 AC092634.7-201ENST00000621022 103 ntBASIC0.89□□□□□ -2.27
KLF4O43474 AC067863.3-201ENST00000624172 122 ntBASIC0.89□□□□□ -2.27
KLF4O43474 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
KLF4O43474 RNA5SP89-201ENST00000410300 108 ntBASIC0.88□□□□□ -2.27
KLF4O43474 RNU7-104P-201ENST00000459398 79 ntBASIC0.88□□□□□ -2.27
KLF4O43474 MIR373-201ENST00000362273 69 ntBASIC0.87□□□□□ -2.27
KLF4O43474 Y_RNA.348-201ENST00000365403 103 ntBASIC0.87□□□□□ -2.27
KLF4O43474 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.87□□□□□ -2.27
KLF4O43474 AC022709.1-201ENST00000615967 87 ntBASIC0.87□□□□□ -2.27
KLF4O43474 U7.3-201ENST00000616123 62 ntBASIC0.87□□□□□ -2.27
KLF4O43474 RNA5SP403-201ENST00000363598 108 ntBASIC0.86□□□□□ -2.27
KLF4O43474 RNA5SP227-201ENST00000516184 113 ntBASIC0.86□□□□□ -2.27
KLF4O43474 RNU6-65P-201ENST00000516332 98 ntBASIC0.86□□□□□ -2.27
KLF4O43474 RNU7-13P-201ENST00000516413 62 ntBASIC0.86□□□□□ -2.27
KLF4O43474 MIR6788-201ENST00000618842 66 ntBASIC0.86□□□□□ -2.27
KLF4O43474 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
KLF4O43474 SNORD115-44-201ENST00000365391 82 ntBASIC0.85□□□□□ -2.27
KLF4O43474 Y_RNA.540-201ENST00000384638 111 ntBASIC0.85□□□□□ -2.27
KLF4O43474 MIR548J-201ENST00000408833 112 ntBASIC0.85□□□□□ -2.27
KLF4O43474 RNU6-519P-201ENST00000410590 108 ntBASIC0.85□□□□□ -2.27
KLF4O43474 SNORD71-201ENST00000411292 86 ntBASIC0.85□□□□□ -2.27
KLF4O43474 RNU6-1223P-201ENST00000517124 104 ntBASIC0.85□□□□□ -2.27
KLF4O43474 MIR4536-1-201ENST00000583537 88 ntBASIC0.85□□□□□ -2.27
KLF4O43474 MIR151B-201ENST00000584249 96 ntBASIC0.85□□□□□ -2.27
KLF4O43474 TRDV1-202ENST00000621643 102 ntBASIC0.85□□□□□ -2.27
KLF4O43474 MIR532-201ENST00000385025 91 ntBASIC0.84□□□□□ -2.27
KLF4O43474 RNU6-162P-201ENST00000516228 103 ntBASIC0.84□□□□□ -2.27
KLF4O43474 RNU7-161P-201ENST00000517289 62 ntBASIC0.84□□□□□ -2.27
KLF4O43474 Y_RNA.220-201ENST00000364244 109 ntBASIC0.83□□□□□ -2.28
KLF4O43474 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.83□□□□□ -2.28
KLF4O43474 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.83□□□□□ -2.28
KLF4O43474 RNU7-74P-201ENST00000459104 62 ntBASIC0.83□□□□□ -2.28
KLF4O43474 RNA5SP268-201ENST00000516828 124 ntBASIC0.83□□□□□ -2.28
KLF4O43474 MIR3973-201ENST00000579824 107 ntBASIC0.83□□□□□ -2.28
KLF4O43474 MIR6857-201ENST00000613267 93 ntBASIC0.83□□□□□ -2.28
KLF4O43474 RNU6-957P-201ENST00000363652 99 ntBASIC0.82□□□□□ -2.28
KLF4O43474 Y_RNA.283-201ENST00000364798 112 ntBASIC0.82□□□□□ -2.28
KLF4O43474 Y_RNA.694-201ENST00000516677 117 ntBASIC0.82□□□□□ -2.28
KLF4O43474 AC018659.1-201ENST00000551083 169 ntBASIC0.82□□□□□ -2.28
KLF4O43474 MIR6515-201ENST00000619843 57 ntBASIC0.82□□□□□ -2.28
KLF4O43474 MIR6828-201ENST00000636181 60 ntBASIC0.82□□□□□ -2.28
KLF4O43474 RNY1P8-201ENST00000383970 114 ntBASIC0.81□□□□□ -2.28
KLF4O43474 Y_RNA.596-201ENST00000410462 109 ntBASIC0.81□□□□□ -2.28
KLF4O43474 SNORA40.8-201ENST00000411034 126 ntBASIC0.81□□□□□ -2.28
KLF4O43474 snoU13.11-201ENST00000459219 104 ntBASIC0.81□□□□□ -2.28
KLF4O43474 MALAT1.1-201ENST00000618249 95 ntBASIC0.81□□□□□ -2.28
KLF4O43474 RNU6-905P-201ENST00000384434 107 ntBASIC0.8□□□□□ -2.28
KLF4O43474 RNU6-1265P-201ENST00000516342 103 ntBASIC0.8□□□□□ -2.28
KLF4O43474 SNORA8.2-201ENST00000384372 139 ntBASIC0.79□□□□□ -2.28
KLF4O43474 AL606490.4-201ENST00000423117 127 ntBASIC0.79□□□□□ -2.28
KLF4O43474 RNA5SP121-201ENST00000516537 101 ntBASIC0.79□□□□□ -2.28
KLF4O43474 CYP3A137P-201ENST00000562436 69 ntBASIC0.79□□□□□ -2.28
KLF4O43474 RNU6-640P-201ENST00000363693 105 ntBASIC0.78□□□□□ -2.28
KLF4O43474 RNA5SP517-201ENST00000364724 117 ntBASIC0.78□□□□□ -2.28
KLF4O43474 Y_RNA.290-201ENST00000364879 114 ntBASIC0.78□□□□□ -2.28
KLF4O43474 RNU6-716P-201ENST00000365621 103 ntBASIC0.78□□□□□ -2.28
KLF4O43474 RNU6-351P-201ENST00000516097 100 ntBASIC0.78□□□□□ -2.28
KLF4O43474 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
KLF4O43474 SNORA36.1-201ENST00000363424 132 ntBASIC0.77□□□□□ -2.29
KLF4O43474 AL161932.1-201ENST00000437408 146 ntBASIC0.77□□□□□ -2.29
KLF4O43474 RNA5SP480-201ENST00000516840 109 ntBASIC0.77□□□□□ -2.29
KLF4O43474 RNU6-1057P-201ENST00000517162 102 ntBASIC0.77□□□□□ -2.29
KLF4O43474 MIR4698-201ENST00000577795 80 ntBASIC0.77□□□□□ -2.29
KLF4O43474 SNORD114-2-201ENST00000363953 78 ntBASIC0.76□□□□□ -2.29
KLF4O43474 RNU6-726P-201ENST00000364680 107 ntBASIC0.76□□□□□ -2.29
KLF4O43474 MIR7-2-201ENST00000384970 110 ntBASIC0.76□□□□□ -2.29
KLF4O43474 MIR548U-201ENST00000390728 81 ntBASIC0.76□□□□□ -2.29
KLF4O43474 SNORD41.1-201ENST00000391000 69 ntBASIC0.76□□□□□ -2.29
KLF4O43474 RN7SKP12-201ENST00000516275 143 ntBASIC0.76□□□□□ -2.29
KLF4O43474 MIR5000-201ENST00000577717 103 ntBASIC0.76□□□□□ -2.29
KLF4O43474 PVT1_3.1-201ENST00000620853 95 ntBASIC0.76□□□□□ -2.29
KLF4O43474 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.76□□□□□ -2.29
KLF4O43474 Y_RNA.239-201ENST00000364444 113 ntBASIC0.75□□□□□ -2.29
KLF4O43474 RNU6-945P-201ENST00000383947 107 ntBASIC0.75□□□□□ -2.29
KLF4O43474 SNORD101-201ENST00000384027 73 ntBASIC0.75□□□□□ -2.29
KLF4O43474 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
KLF4O43474 RNY4P30-201ENST00000410216 95 ntBASIC0.75□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 233.6 ms