Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 RNU7-21P-201ENST00000459430 62 ntBASIC2.16□□□□□ -2.06
HOXA2O43364 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
HOXA2O43364 SNORD115-44-201ENST00000365391 82 ntBASIC2.15□□□□□ -2.07
HOXA2O43364 Y_RNA.363-201ENST00000365529 113 ntBASIC2.15□□□□□ -2.07
HOXA2O43364 RNU6-663P-201ENST00000391105 106 ntBASIC2.15□□□□□ -2.07
HOXA2O43364 RNU6-1052P-201ENST00000411398 104 ntBASIC2.15□□□□□ -2.07
HOXA2O43364 RNU6-977P-201ENST00000516411 103 ntBASIC2.15□□□□□ -2.07
HOXA2O43364 RNU6-719P-201ENST00000516671 104 ntBASIC2.15□□□□□ -2.07
HOXA2O43364 Evf-2_5p.1-201ENST00000614213 142 ntBASIC2.15□□□□□ -2.07
HOXA2O43364 U6.111-201ENST00000636093 83 ntBASIC2.15□□□□□ -2.07
HOXA2O43364 RNU7-90P-201ENST00000459216 62 ntBASIC2.14□□□□□ -2.07
HOXA2O43364 SNORD115-31-201ENST00000365318 82 ntBASIC2.13□□□□□ -2.07
HOXA2O43364 RNU1-119P-201ENST00000391122 165 ntBASIC2.13□□□□□ -2.07
HOXA2O43364 U3.27-201ENST00000391237 200 ntBASIC2.13□□□□□ -2.07
HOXA2O43364 MIR4804-201ENST00000581683 73 ntBASIC2.13□□□□□ -2.07
HOXA2O43364 IST1-227ENST00000626438 126 ntTSL 5 BASIC2.13□□□□□ -2.07
HOXA2O43364 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
HOXA2O43364 RNU6-824P-201ENST00000363724 104 ntBASIC2.12□□□□□ -2.07
HOXA2O43364 RNU6-800P-201ENST00000384473 103 ntBASIC2.12□□□□□ -2.07
HOXA2O43364 MIR100-201ENST00000385259 80 ntBASIC2.12□□□□□ -2.07
HOXA2O43364 AC104435.1-201ENST00000483483 166 ntBASIC2.12□□□□□ -2.07
HOXA2O43364 IGLVVI-22-1-201ENST00000521183 211 ntBASIC2.12□□□□□ -2.07
HOXA2O43364 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC2.12□□□□□ -2.07
HOXA2O43364 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.12□□□□□ -2.07
HOXA2O43364 Y_RNA.386-201ENST00000383913 105 ntBASIC2.11□□□□□ -2.07
HOXA2O43364 RNU6-895P-201ENST00000384125 103 ntBASIC2.11□□□□□ -2.07
HOXA2O43364 RNU6-910P-201ENST00000390844 107 ntBASIC2.11□□□□□ -2.07
HOXA2O43364 MIR1265-201ENST00000408444 86 ntBASIC2.11□□□□□ -2.07
HOXA2O43364 MIR4448-201ENST00000584360 86 ntBASIC2.11□□□□□ -2.07
HOXA2O43364 MIR5002-201ENST00000584713 97 ntBASIC2.11□□□□□ -2.07
HOXA2O43364 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
HOXA2O43364 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC2.11□□□□□ -2.07
HOXA2O43364 RNU6-1177P-201ENST00000391058 104 ntBASIC2.1□□□□□ -2.07
HOXA2O43364 RNU6-287P-201ENST00000516230 98 ntBASIC2.1□□□□□ -2.07
HOXA2O43364 RNU7-13P-201ENST00000516413 62 ntBASIC2.1□□□□□ -2.07
HOXA2O43364 MIR8053-201ENST00000613344 75 ntBASIC2.1□□□□□ -2.07
HOXA2O43364 MIR1-1-201ENST00000362147 71 ntBASIC2.09□□□□□ -2.07
HOXA2O43364 RNU6-274P-201ENST00000459566 107 ntBASIC2.09□□□□□ -2.07
HOXA2O43364 RNU1-40P-201ENST00000516816 164 ntBASIC2.09□□□□□ -2.07
HOXA2O43364 RNU1-97P-201ENST00000516872 164 ntBASIC2.09□□□□□ -2.07
HOXA2O43364 RNU6-902P-201ENST00000517212 91 ntBASIC2.09□□□□□ -2.07
HOXA2O43364 MIR4285-201ENST00000581001 85 ntBASIC2.09□□□□□ -2.07
HOXA2O43364 AL359821.1-201ENST00000605519 182 ntBASIC2.09□□□□□ -2.07
HOXA2O43364 DLEU2_3.2-201ENST00000612883 73 ntBASIC2.09□□□□□ -2.07
HOXA2O43364 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
HOXA2O43364 RNU6-369P-201ENST00000362515 102 ntBASIC2.08□□□□□ -2.08
HOXA2O43364 Y_RNA.174-201ENST00000363781 105 ntBASIC2.08□□□□□ -2.08
HOXA2O43364 RNU6ATAC33P-201ENST00000408647 126 ntBASIC2.08□□□□□ -2.08
HOXA2O43364 AC067940.1-201ENST00000458411 300 ntBASIC2.08□□□□□ -2.08
HOXA2O43364 RNU7-56P-201ENST00000458744 62 ntBASIC2.08□□□□□ -2.08
HOXA2O43364 SNORD79.1-201ENST00000516069 84 ntBASIC2.08□□□□□ -2.08
HOXA2O43364 AL157834.3-201ENST00000615543 103 ntBASIC2.08□□□□□ -2.08
HOXA2O43364 RNU1-17P-201ENST00000363022 152 ntBASIC2.07□□□□□ -2.08
HOXA2O43364 AC025033.1-201ENST00000463883 194 ntBASIC2.07□□□□□ -2.08
HOXA2O43364 AL137847.3-201ENST00000611521 109 ntBASIC2.07□□□□□ -2.08
HOXA2O43364 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.07□□□□□ -2.08
HOXA2O43364 MIR4773-1-201ENST00000637203 78 ntBASIC2.07□□□□□ -2.08
HOXA2O43364 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
HOXA2O43364 Y_RNA.205-201ENST00000364128 113 ntBASIC2.06□□□□□ -2.08
HOXA2O43364 RNU6-752P-201ENST00000516376 102 ntBASIC2.06□□□□□ -2.08
HOXA2O43364 Y_RNA.676-201ENST00000516393 96 ntBASIC2.06□□□□□ -2.08
HOXA2O43364 Y_RNA.32-201ENST00000362589 110 ntBASIC2.05□□□□□ -2.08
HOXA2O43364 SNORD45.1-201ENST00000363181 77 ntBASIC2.05□□□□□ -2.08
HOXA2O43364 MIR520F-201ENST00000384824 87 ntBASIC2.05□□□□□ -2.08
HOXA2O43364 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
HOXA2O43364 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
HOXA2O43364 MIR216B-201ENST00000390186 82 ntBASIC2.04□□□□□ -2.08
HOXA2O43364 MIR2113-201ENST00000459007 91 ntBASIC2.04□□□□□ -2.08
HOXA2O43364 SNORA31.14-201ENST00000516728 116 ntBASIC2.04□□□□□ -2.08
HOXA2O43364 SNORD115-24-201ENST00000363528 82 ntBASIC2.03□□□□□ -2.08
HOXA2O43364 SNORD45A-201ENST00000384512 84 ntBASIC2.03□□□□□ -2.08
HOXA2O43364 RNU6ATAC8P-201ENST00000408460 126 ntBASIC2.03□□□□□ -2.08
HOXA2O43364 RNU6-881P-201ENST00000516813 102 ntBASIC2.03□□□□□ -2.08
HOXA2O43364 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.03□□□□□ -2.08
HOXA2O43364 uc_338.16-201ENST00000621804 95 ntBASIC2.03□□□□□ -2.08
HOXA2O43364 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.02□□□□□ -2.09
HOXA2O43364 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.02□□□□□ -2.09
HOXA2O43364 RNA5SP37-201ENST00000365420 130 ntBASIC2.02□□□□□ -2.09
HOXA2O43364 RNU6-471P-201ENST00000383944 106 ntBASIC2.02□□□□□ -2.09
HOXA2O43364 AC093423.1-201ENST00000440817 142 ntBASIC2.02□□□□□ -2.09
HOXA2O43364 SNORA25.15-201ENST00000516487 89 ntBASIC2.02□□□□□ -2.09
HOXA2O43364 SNORA70.22-201ENST00000517160 124 ntBASIC2.02□□□□□ -2.09
HOXA2O43364 AL078603.1-201ENST00000603824 313 ntBASIC2.02□□□□□ -2.09
HOXA2O43364 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
HOXA2O43364 RNU6-382P-201ENST00000365181 106 ntBASIC2.01□□□□□ -2.09
HOXA2O43364 SNORD12-201ENST00000391002 90 ntBASIC2.01□□□□□ -2.09
HOXA2O43364 AC084768.2-201ENST00000622736 221 ntBASIC2.01□□□□□ -2.09
HOXA2O43364 RNA5SP403-201ENST00000363598 108 ntBASIC2□□□□□ -2.09
HOXA2O43364 RNU6-1126P-201ENST00000384002 107 ntBASIC2□□□□□ -2.09
HOXA2O43364 MIR1827-201ENST00000408549 66 ntBASIC2□□□□□ -2.09
HOXA2O43364 AC244098.3-201ENST00000424803 96 ntBASIC2□□□□□ -2.09
HOXA2O43364 MIR4781-201ENST00000585250 76 ntBASIC2□□□□□ -2.09
HOXA2O43364 AC005520.4-201ENST00000604337 90 ntBASIC2□□□□□ -2.09
HOXA2O43364 uc_338.20-201ENST00000621563 178 ntBASIC2□□□□□ -2.09
HOXA2O43364 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
HOXA2O43364 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
HOXA2O43364 MIR337-201ENST00000362281 93 ntBASIC1.99□□□□□ -2.09
HOXA2O43364 RNA5SP160-201ENST00000364866 120 ntBASIC1.99□□□□□ -2.09
HOXA2O43364 Y_RNA.338-201ENST00000365320 114 ntBASIC1.99□□□□□ -2.09
HOXA2O43364 MIR9-3-201ENST00000385084 90 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms