Protein–RNA interactions for Protein: O15259

NPHP1, Nephrocystin-1, humanhuman

Predictions only

Length 732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1O15259 RNU6-652P-201ENST00000365488 107 ntBASIC-0.05□□□□□ -2.42
NPHP1O15259 MIR145-201ENST00000384967 88 ntBASIC-0.05□□□□□ -2.42
NPHP1O15259 RNU6-1061P-201ENST00000516530 99 ntBASIC-0.05□□□□□ -2.42
NPHP1O15259 RNU6-255P-201ENST00000516957 105 ntBASIC-0.05□□□□□ -2.42
NPHP1O15259 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-0.05□□□□□ -2.42
NPHP1O15259 MTND5P18-201ENST00000445624 1801 ntBASIC-0.06□□□□□ -2.42
NPHP1O15259 Y_RNA.343-201ENST00000365354 112 ntBASIC-0.06□□□□□ -2.42
NPHP1O15259 Y_RNA.568-201ENST00000384742 113 ntBASIC-0.06□□□□□ -2.42
NPHP1O15259 MIR593-201ENST00000384856 100 ntBASIC-0.06□□□□□ -2.42
NPHP1O15259 SNORA40-201ENST00000388090 126 ntBASIC-0.06□□□□□ -2.42
NPHP1O15259 MIR1265-201ENST00000408444 86 ntBASIC-0.06□□□□□ -2.42
NPHP1O15259 RNU6-1018P-201ENST00000516577 106 ntBASIC-0.06□□□□□ -2.42
NPHP1O15259 RNU6-161P-201ENST00000363051 106 ntBASIC-0.07□□□□□ -2.42
NPHP1O15259 RNY1P5-201ENST00000383890 115 ntBASIC-0.07□□□□□ -2.42
NPHP1O15259 Y_RNA.506-201ENST00000384494 102 ntBASIC-0.07□□□□□ -2.42
NPHP1O15259 MIR892B-201ENST00000401279 77 ntBASIC-0.07□□□□□ -2.42
NPHP1O15259 SNORD110-201ENST00000408189 75 ntBASIC-0.07□□□□□ -2.42
NPHP1O15259 RNU6-257P-201ENST00000410238 98 ntBASIC-0.07□□□□□ -2.42
NPHP1O15259 RNA5SP484-201ENST00000458857 111 ntBASIC-0.07□□□□□ -2.42
NPHP1O15259 RNU7-74P-201ENST00000459104 62 ntBASIC-0.07□□□□□ -2.42
NPHP1O15259 AC141557.1-201ENST00000540982 400 ntBASIC-0.07□□□□□ -2.42
NPHP1O15259 NAMPTP3-201ENST00000569273 224 ntBASIC-0.07□□□□□ -2.42
NPHP1O15259 MIR4677-201ENST00000584153 80 ntBASIC-0.07□□□□□ -2.42
NPHP1O15259 SNORD38.1-201ENST00000363863 68 ntBASIC-0.08□□□□□ -2.42
NPHP1O15259 Y_RNA.247-201ENST00000364500 92 ntBASIC-0.08□□□□□ -2.42
NPHP1O15259 RNU6-409P-201ENST00000384114 104 ntBASIC-0.08□□□□□ -2.42
NPHP1O15259 Y_RNA.507-201ENST00000384500 99 ntBASIC-0.08□□□□□ -2.42
NPHP1O15259 RNU6-1254P-201ENST00000391266 104 ntBASIC-0.08□□□□□ -2.42
NPHP1O15259 MIR1912-201ENST00000410389 80 ntBASIC-0.08□□□□□ -2.42
NPHP1O15259 AC006210.1-201ENST00000424882 111 ntBASIC-0.08□□□□□ -2.42
NPHP1O15259 SPINT5P-201ENST00000448174 155 ntBASIC-0.08□□□□□ -2.42
NPHP1O15259 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.08□□□□□ -2.42
NPHP1O15259 RNU6-90P-201ENST00000606352 106 ntBASIC-0.08□□□□□ -2.42
NPHP1O15259 Y_RNA.155-201ENST00000363632 101 ntBASIC-0.09□□□□□ -2.42
NPHP1O15259 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.09□□□□□ -2.42
NPHP1O15259 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.09□□□□□ -2.42
NPHP1O15259 MIR548G-201ENST00000408442 89 ntBASIC-0.09□□□□□ -2.42
NPHP1O15259 RNU6-346P-201ENST00000516288 111 ntBASIC-0.09□□□□□ -2.42
NPHP1O15259 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.09□□□□□ -2.42
NPHP1O15259 Y_RNA.173-201ENST00000363776 113 ntBASIC-0.1□□□□□ -2.43
NPHP1O15259 Y_RNA.346-201ENST00000365385 112 ntBASIC-0.1□□□□□ -2.43
NPHP1O15259 SNORD115-44-201ENST00000365391 82 ntBASIC-0.1□□□□□ -2.43
NPHP1O15259 RNU6V-201ENST00000384105 107 ntBASIC-0.1□□□□□ -2.43
NPHP1O15259 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.1□□□□□ -2.43
NPHP1O15259 Y_RNA.630-201ENST00000411370 108 ntBASIC-0.1□□□□□ -2.43
NPHP1O15259 HMGN2P22-201ENST00000427588 175 ntBASIC-0.1□□□□□ -2.43
NPHP1O15259 RNU6-772P-201ENST00000516042 105 ntBASIC-0.1□□□□□ -2.43
NPHP1O15259 MIR3671-201ENST00000580455 88 ntBASIC-0.1□□□□□ -2.43
NPHP1O15259 MIR548AG2-201ENST00000581228 64 ntBASIC-0.1□□□□□ -2.43
NPHP1O15259 MIR3925-201ENST00000584674 77 ntBASIC-0.1□□□□□ -2.43
NPHP1O15259 SNORD36A-201ENST00000362874 73 ntBASIC-0.11□□□□□ -2.43
NPHP1O15259 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.11□□□□□ -2.43
NPHP1O15259 RNU6-816P-201ENST00000390914 107 ntBASIC-0.11□□□□□ -2.43
NPHP1O15259 RNU6-243P-201ENST00000391140 107 ntBASIC-0.11□□□□□ -2.43
NPHP1O15259 RNU6-1268P-201ENST00000391214 107 ntBASIC-0.11□□□□□ -2.43
NPHP1O15259 RNU6-1239P-201ENST00000391310 107 ntBASIC-0.11□□□□□ -2.43
NPHP1O15259 AL162726.3-218ENST00000636401 95 ntBASIC-0.11□□□□□ -2.43
NPHP1O15259 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.12□□□□□ -2.43
NPHP1O15259 RNU1-141P-201ENST00000364623 158 ntBASIC-0.12□□□□□ -2.43
NPHP1O15259 RNU6-302P-201ENST00000365249 107 ntBASIC-0.12□□□□□ -2.43
NPHP1O15259 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.12□□□□□ -2.43
NPHP1O15259 MIR617-201ENST00000385030 97 ntBASIC-0.12□□□□□ -2.43
NPHP1O15259 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-0.12□□□□□ -2.43
NPHP1O15259 RNU6-1163P-201ENST00000364516 107 ntBASIC-0.13□□□□□ -2.43
NPHP1O15259 MIR539-201ENST00000365690 78 ntBASIC-0.13□□□□□ -2.43
NPHP1O15259 MIR519E-201ENST00000385075 84 ntBASIC-0.13□□□□□ -2.43
NPHP1O15259 RNU6-1211P-201ENST00000459179 105 ntBASIC-0.13□□□□□ -2.43
NPHP1O15259 AL442128.1-201ENST00000615151 90 ntBASIC-0.13□□□□□ -2.43
NPHP1O15259 AL157777.2-201ENST00000258070 137 ntBASIC-0.14□□□□□ -2.43
NPHP1O15259 AC093423.1-201ENST00000440817 142 ntBASIC-0.14□□□□□ -2.43
NPHP1O15259 TRDV1-202ENST00000621643 102 ntBASIC-0.14□□□□□ -2.43
NPHP1O15259 RNU6-756P-201ENST00000383997 107 ntBASIC-0.15□□□□□ -2.43
NPHP1O15259 RNU7-165P-201ENST00000458864 60 ntBASIC-0.15□□□□□ -2.43
NPHP1O15259 RNU7-159P-201ENST00000459284 62 ntBASIC-0.15□□□□□ -2.43
NPHP1O15259 SNORA25.13-201ENST00000516395 103 ntBASIC-0.15□□□□□ -2.43
NPHP1O15259 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.15□□□□□ -2.43
NPHP1O15259 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-0.15□□□□□ -2.43
NPHP1O15259 RNU6-929P-201ENST00000384429 107 ntBASIC-0.16□□□□□ -2.44
NPHP1O15259 SNORA75.1-201ENST00000391130 148 ntBASIC-0.16□□□□□ -2.44
NPHP1O15259 Y_RNA.586-201ENST00000391146 98 ntBASIC-0.16□□□□□ -2.44
NPHP1O15259 RNA5SP163-201ENST00000410304 99 ntBASIC-0.16□□□□□ -2.44
NPHP1O15259 AL161932.1-201ENST00000437408 146 ntBASIC-0.16□□□□□ -2.44
NPHP1O15259 MIR2113-201ENST00000459007 91 ntBASIC-0.16□□□□□ -2.44
NPHP1O15259 RNU7-107P-201ENST00000459121 61 ntBASIC-0.16□□□□□ -2.44
NPHP1O15259 RNU6-971P-201ENST00000516920 106 ntBASIC-0.16□□□□□ -2.44
NPHP1O15259 MIR4679-2-201ENST00000578358 77 ntBASIC-0.16□□□□□ -2.44
NPHP1O15259 SNORD114-31-201ENST00000363219 75 ntBASIC-0.17□□□□□ -2.44
NPHP1O15259 Y_RNA.377-201ENST00000365644 108 ntBASIC-0.17□□□□□ -2.44
NPHP1O15259 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-0.17□□□□□ -2.44
NPHP1O15259 RNU6-287P-201ENST00000516230 98 ntBASIC-0.17□□□□□ -2.44
NPHP1O15259 RNU6-180P-201ENST00000516697 61 ntBASIC-0.17□□□□□ -2.44
NPHP1O15259 MIR876-201ENST00000401147 81 ntBASIC-0.18□□□□□ -2.44
NPHP1O15259 MIR548I1-201ENST00000408810 149 ntBASIC-0.18□□□□□ -2.44
NPHP1O15259 Y_RNA.596-201ENST00000410462 109 ntBASIC-0.18□□□□□ -2.44
NPHP1O15259 AC069503.3-201ENST00000618674 145 ntBASIC-0.18□□□□□ -2.44
NPHP1O15259 AC084368.1-201ENST00000620935 65 ntBASIC-0.18□□□□□ -2.44
NPHP1O15259 U6.100-201ENST00000636230 99 ntBASIC-0.18□□□□□ -2.44
NPHP1O15259 RNU6-957P-201ENST00000363652 99 ntBASIC-0.19□□□□□ -2.44
NPHP1O15259 Y_RNA.309-201ENST00000365046 111 ntBASIC-0.19□□□□□ -2.44
NPHP1O15259 Y_RNA.525-201ENST00000384570 113 ntBASIC-0.19□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 165.1 ms