Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 Y_RNA.174-201ENST00000363781 105 ntBASIC0.44□□□□□ -2.34
CDX4O14627 RNU6-215P-201ENST00000365169 102 ntBASIC0.44□□□□□ -2.34
CDX4O14627 Y_RNA.377-201ENST00000365644 108 ntBASIC0.44□□□□□ -2.34
CDX4O14627 MIR140-201ENST00000385282 100 ntBASIC0.44□□□□□ -2.34
CDX4O14627 RNA5SP63-201ENST00000391225 112 ntBASIC0.44□□□□□ -2.34
CDX4O14627 RNU6-554P-201ENST00000410466 106 ntBASIC0.44□□□□□ -2.34
CDX4O14627 SNORA62.5-201ENST00000516634 120 ntBASIC0.44□□□□□ -2.34
CDX4O14627 AC091304.10-201ENST00000641554 121 ntBASIC0.44□□□□□ -2.34
CDX4O14627 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
CDX4O14627 RNU6-170P-201ENST00000362832 104 ntBASIC0.43□□□□□ -2.34
CDX4O14627 Y_RNA.173-201ENST00000363776 113 ntBASIC0.43□□□□□ -2.34
CDX4O14627 RNU6-1163P-201ENST00000364516 107 ntBASIC0.43□□□□□ -2.34
CDX4O14627 RNU6-945P-201ENST00000383947 107 ntBASIC0.43□□□□□ -2.34
CDX4O14627 RNU6-571P-201ENST00000384128 107 ntBASIC0.43□□□□□ -2.34
CDX4O14627 MIR516A2-201ENST00000384888 90 ntBASIC0.43□□□□□ -2.34
CDX4O14627 MIR516A1-201ENST00000385033 90 ntBASIC0.43□□□□□ -2.34
CDX4O14627 SNORD63B-201ENST00000411005 70 ntBASIC0.43□□□□□ -2.34
CDX4O14627 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.43□□□□□ -2.34
CDX4O14627 AC109327.2-201ENST00000448339 378 ntBASIC0.43□□□□□ -2.34
CDX4O14627 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.43□□□□□ -2.34
CDX4O14627 Y_RNA.659-201ENST00000515994 113 ntBASIC0.43□□□□□ -2.34
CDX4O14627 AC096720.1-201ENST00000604441 183 ntBASIC0.43□□□□□ -2.34
CDX4O14627 RNU6-86P-201ENST00000606534 107 ntBASIC0.43□□□□□ -2.34
CDX4O14627 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.43□□□□□ -2.34
CDX4O14627 SNORA63.4-201ENST00000362763 126 ntBASIC0.42□□□□□ -2.34
CDX4O14627 SNORD18A-201ENST00000363753 72 ntBASIC0.42□□□□□ -2.34
CDX4O14627 Y_RNA.342-201ENST00000365352 113 ntBASIC0.42□□□□□ -2.34
CDX4O14627 Y_RNA.567-201ENST00000384736 106 ntBASIC0.42□□□□□ -2.34
CDX4O14627 MIR590-201ENST00000385008 97 ntBASIC0.42□□□□□ -2.34
CDX4O14627 MIR1302-5-201ENST00000408164 150 ntBASIC0.42□□□□□ -2.34
CDX4O14627 RNU7-195P-201ENST00000458793 62 ntBASIC0.42□□□□□ -2.34
CDX4O14627 RNU6-469P-201ENST00000516253 101 ntBASIC0.42□□□□□ -2.34
CDX4O14627 AC138869.1-201ENST00000568623 124 ntBASIC0.42□□□□□ -2.34
CDX4O14627 MIR548Z-201ENST00000584743 97 ntBASIC0.42□□□□□ -2.34
CDX4O14627 AC023932.2-201ENST00000603176 175 ntBASIC0.42□□□□□ -2.34
CDX4O14627 RNU7-10P-201ENST00000607194 63 ntBASIC0.42□□□□□ -2.34
CDX4O14627 Y_RNA.221-201ENST00000364248 96 ntBASIC0.41□□□□□ -2.34
CDX4O14627 RNU4-36P-201ENST00000364294 144 ntBASIC0.41□□□□□ -2.34
CDX4O14627 RNU6-44P-201ENST00000384045 107 ntBASIC0.41□□□□□ -2.34
CDX4O14627 SNORA51.5-201ENST00000384126 131 ntBASIC0.41□□□□□ -2.34
CDX4O14627 AL035461.1-201ENST00000421490 332 ntBASIC0.41□□□□□ -2.34
CDX4O14627 RNU6-904P-201ENST00000516206 101 ntBASIC0.41□□□□□ -2.34
CDX4O14627 RN7SKP12-201ENST00000516275 143 ntBASIC0.41□□□□□ -2.34
CDX4O14627 RNU6-795P-201ENST00000516323 103 ntBASIC0.41□□□□□ -2.34
CDX4O14627 RNU6-109P-201ENST00000516364 107 ntBASIC0.41□□□□□ -2.34
CDX4O14627 RNU6-184P-201ENST00000516514 107 ntBASIC0.41□□□□□ -2.34
CDX4O14627 RNU6-919P-201ENST00000516731 104 ntBASIC0.41□□□□□ -2.34
CDX4O14627 RNA5SP94-201ENST00000516917 108 ntBASIC0.41□□□□□ -2.34
CDX4O14627 AC012531.4-201ENST00000616509 177 ntBASIC0.41□□□□□ -2.34
CDX4O14627 MIR450A1-201ENST00000362262 91 ntBASIC0.4□□□□□ -2.35
CDX4O14627 Y_RNA.57-201ENST00000362806 113 ntBASIC0.4□□□□□ -2.35
CDX4O14627 SNORA36.1-201ENST00000363424 132 ntBASIC0.4□□□□□ -2.35
CDX4O14627 SNORD115-24-201ENST00000363528 82 ntBASIC0.4□□□□□ -2.35
CDX4O14627 RNU6-756P-201ENST00000383997 107 ntBASIC0.4□□□□□ -2.35
CDX4O14627 Y_RNA.467-201ENST00000384297 102 ntBASIC0.4□□□□□ -2.35
CDX4O14627 SNORD28-201ENST00000384706 75 ntBASIC0.4□□□□□ -2.35
CDX4O14627 MIR599-201ENST00000385069 95 ntBASIC0.4□□□□□ -2.35
CDX4O14627 Y_RNA.601-201ENST00000410500 113 ntBASIC0.4□□□□□ -2.35
CDX4O14627 AC244505.6-201ENST00000452829 130 ntBASIC0.4□□□□□ -2.35
CDX4O14627 AL157398.1-201ENST00000452981 186 ntBASIC0.4□□□□□ -2.35
CDX4O14627 Y_RNA.809-201ENST00000516058 95 ntBASIC0.4□□□□□ -2.35
CDX4O14627 RNA5SP285-201ENST00000516619 119 ntBASIC0.4□□□□□ -2.35
CDX4O14627 AC244669.1-204ENST00000621564 178 ntBASIC0.4□□□□□ -2.35
CDX4O14627 Y_RNA.10-201ENST00000362371 110 ntBASIC0.39□□□□□ -2.35
CDX4O14627 Y_RNA.78-201ENST00000362970 110 ntBASIC0.39□□□□□ -2.35
CDX4O14627 Y_RNA.95-201ENST00000363079 95 ntBASIC0.39□□□□□ -2.35
CDX4O14627 SNORD45B-201ENST00000364617 72 ntBASIC0.39□□□□□ -2.35
CDX4O14627 RNA5SP517-201ENST00000364724 117 ntBASIC0.39□□□□□ -2.35
CDX4O14627 SNORA50A-201ENST00000384225 134 ntBASIC0.39□□□□□ -2.35
CDX4O14627 MIR181B2-201ENST00000385004 89 ntBASIC0.39□□□□□ -2.35
CDX4O14627 SCARNA23-201ENST00000516060 130 ntBASIC0.39□□□□□ -2.35
CDX4O14627 RNA5SP47-201ENST00000517230 109 ntBASIC0.39□□□□□ -2.35
CDX4O14627 RNU6-537P-201ENST00000517277 103 ntBASIC0.39□□□□□ -2.35
CDX4O14627 MIR4777-201ENST00000583710 86 ntBASIC0.39□□□□□ -2.35
CDX4O14627 SNORD36A-201ENST00000362874 73 ntBASIC0.38□□□□□ -2.35
CDX4O14627 RNU6-1244P-201ENST00000363614 108 ntBASIC0.38□□□□□ -2.35
CDX4O14627 RNU6-1229P-201ENST00000364295 107 ntBASIC0.38□□□□□ -2.35
CDX4O14627 RNU6-524P-201ENST00000384270 107 ntBASIC0.38□□□□□ -2.35
CDX4O14627 RNU6-1254P-201ENST00000391266 104 ntBASIC0.38□□□□□ -2.35
CDX4O14627 AC097635.1-201ENST00000450678 155 ntBASIC0.38□□□□□ -2.35
CDX4O14627 RNU7-161P-201ENST00000517289 62 ntBASIC0.38□□□□□ -2.35
CDX4O14627 MIR4639-201ENST00000584938 69 ntBASIC0.38□□□□□ -2.35
CDX4O14627 AC067863.3-201ENST00000624172 122 ntBASIC0.38□□□□□ -2.35
CDX4O14627 RNU6-755P-201ENST00000364400 103 ntBASIC0.37□□□□□ -2.35
CDX4O14627 RNU6-1113P-201ENST00000384348 107 ntBASIC0.37□□□□□ -2.35
CDX4O14627 MIR519A1-201ENST00000385257 85 ntBASIC0.37□□□□□ -2.35
CDX4O14627 RNU6-243P-201ENST00000391140 107 ntBASIC0.37□□□□□ -2.35
CDX4O14627 AL161932.1-201ENST00000437408 146 ntBASIC0.37□□□□□ -2.35
CDX4O14627 AL031737.1-201ENST00000450125 223 ntBASIC0.37□□□□□ -2.35
CDX4O14627 RNU6-135P-201ENST00000516769 101 ntBASIC0.37□□□□□ -2.35
CDX4O14627 SNORA25.18-201ENST00000607153 114 ntBASIC0.37□□□□□ -2.35
CDX4O14627 AC103810.7-201ENST00000607821 91 ntBASIC0.37□□□□□ -2.35
CDX4O14627 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.37□□□□□ -2.35
CDX4O14627 AC092634.7-201ENST00000621022 103 ntBASIC0.37□□□□□ -2.35
CDX4O14627 AC025521.1-201ENST00000621624 286 ntBASIC0.37□□□□□ -2.35
CDX4O14627 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.37□□□□□ -2.35
CDX4O14627 RNU6-766P-201ENST00000362478 107 ntBASIC0.36□□□□□ -2.35
CDX4O14627 RNU6-1260P-201ENST00000362944 107 ntBASIC0.36□□□□□ -2.35
CDX4O14627 RNA5SP403-201ENST00000363598 108 ntBASIC0.36□□□□□ -2.35
CDX4O14627 RNU6-1125P-201ENST00000363601 107 ntBASIC0.36□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 168.4 ms