Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 Y_RNA.495-201ENST00000384435 112 ntBASIC0.95□□□□□ -2.26
CCDC163A0A0D9SF12 RNU6-644P-201ENST00000391155 98 ntBASIC0.95□□□□□ -2.26
CCDC163A0A0D9SF12 RNU6-1254P-201ENST00000391266 104 ntBASIC0.95□□□□□ -2.26
CCDC163A0A0D9SF12 RNA5SP436-201ENST00000516020 115 ntBASIC0.95□□□□□ -2.26
CCDC163A0A0D9SF12 RNU6-537P-201ENST00000517277 103 ntBASIC0.95□□□□□ -2.26
CCDC163A0A0D9SF12 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC0.95□□□□□ -2.26
CCDC163A0A0D9SF12 RNU6-1244P-201ENST00000363614 108 ntBASIC0.94□□□□□ -2.26
CCDC163A0A0D9SF12 RNU6-153P-201ENST00000364422 104 ntBASIC0.94□□□□□ -2.26
CCDC163A0A0D9SF12 RNU7-61P-201ENST00000515897 61 ntBASIC0.94□□□□□ -2.26
CCDC163A0A0D9SF12 MIR4653-201ENST00000585107 83 ntBASIC0.94□□□□□ -2.26
CCDC163A0A0D9SF12 MIR216A-201ENST00000385063 110 ntBASIC0.93□□□□□ -2.26
CCDC163A0A0D9SF12 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.93□□□□□ -2.26
CCDC163A0A0D9SF12 Y_RNA.93-201ENST00000363066 109 ntBASIC0.92□□□□□ -2.26
CCDC163A0A0D9SF12 RNU6-524P-201ENST00000384270 107 ntBASIC0.92□□□□□ -2.26
CCDC163A0A0D9SF12 AC097635.1-201ENST00000450678 155 ntBASIC0.92□□□□□ -2.26
CCDC163A0A0D9SF12 RNU6-162P-201ENST00000516228 103 ntBASIC0.92□□□□□ -2.26
CCDC163A0A0D9SF12 Y_RNA.705-201ENST00000516862 110 ntBASIC0.92□□□□□ -2.26
CCDC163A0A0D9SF12 AC025521.1-201ENST00000621624 286 ntBASIC0.92□□□□□ -2.26
CCDC163A0A0D9SF12 RNU4-45P-201ENST00000365469 141 ntBASIC0.91□□□□□ -2.26
CCDC163A0A0D9SF12 RNU6-110P-201ENST00000384508 104 ntBASIC0.91□□□□□ -2.26
CCDC163A0A0D9SF12 AP001318.4-201ENST00000616637 121 ntBASIC0.91□□□□□ -2.26
CCDC163A0A0D9SF12 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.91□□□□□ -2.26
CCDC163A0A0D9SF12 SNORD18A-201ENST00000363753 72 ntBASIC0.9□□□□□ -2.27
CCDC163A0A0D9SF12 AC244505.6-201ENST00000452829 130 ntBASIC0.9□□□□□ -2.27
CCDC163A0A0D9SF12 SNORA40.13-201ENST00000516379 120 ntBASIC0.9□□□□□ -2.27
CCDC163A0A0D9SF12 RNU6-135P-201ENST00000516769 101 ntBASIC0.9□□□□□ -2.27
CCDC163A0A0D9SF12 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.9□□□□□ -2.27
CCDC163A0A0D9SF12 AC244669.1-204ENST00000621564 178 ntBASIC0.9□□□□□ -2.27
CCDC163A0A0D9SF12 SNORD36A-201ENST00000362874 73 ntBASIC0.89□□□□□ -2.27
CCDC163A0A0D9SF12 Y_RNA.96-201ENST00000363092 109 ntBASIC0.89□□□□□ -2.27
CCDC163A0A0D9SF12 RNY1P4-201ENST00000384595 115 ntBASIC0.89□□□□□ -2.27
CCDC163A0A0D9SF12 RNU6-972P-201ENST00000391208 107 ntBASIC0.89□□□□□ -2.27
CCDC163A0A0D9SF12 MIR548L-201ENST00000408303 86 ntBASIC0.89□□□□□ -2.27
CCDC163A0A0D9SF12 AL606490.4-201ENST00000423117 127 ntBASIC0.89□□□□□ -2.27
CCDC163A0A0D9SF12 Y_RNA.677-201ENST00000516401 85 ntBASIC0.89□□□□□ -2.27
CCDC163A0A0D9SF12 AL513043.2-201ENST00000573941 143 ntBASIC0.89□□□□□ -2.27
CCDC163A0A0D9SF12 AC103810.9-201ENST00000606688 112 ntBASIC0.89□□□□□ -2.27
CCDC163A0A0D9SF12 SNORD28-201ENST00000384706 75 ntBASIC0.88□□□□□ -2.27
CCDC163A0A0D9SF12 MIR140-201ENST00000385282 100 ntBASIC0.88□□□□□ -2.27
CCDC163A0A0D9SF12 RNU6-887P-201ENST00000410660 100 ntBASIC0.88□□□□□ -2.27
CCDC163A0A0D9SF12 MTATP8P2-201ENST00000435212 202 ntBASIC0.88□□□□□ -2.27
CCDC163A0A0D9SF12 RNU7-104P-201ENST00000459398 79 ntBASIC0.88□□□□□ -2.27
CCDC163A0A0D9SF12 RNU6-168P-201ENST00000516189 101 ntBASIC0.88□□□□□ -2.27
CCDC163A0A0D9SF12 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
CCDC163A0A0D9SF12 RNU6-1260P-201ENST00000362944 107 ntBASIC0.87□□□□□ -2.27
CCDC163A0A0D9SF12 RNA5SP89-201ENST00000410300 108 ntBASIC0.87□□□□□ -2.27
CCDC163A0A0D9SF12 AL161932.1-201ENST00000437408 146 ntBASIC0.87□□□□□ -2.27
CCDC163A0A0D9SF12 RNA5SP94-201ENST00000516917 108 ntBASIC0.87□□□□□ -2.27
CCDC163A0A0D9SF12 MIR4639-201ENST00000584938 69 ntBASIC0.87□□□□□ -2.27
CCDC163A0A0D9SF12 MIR6513-201ENST00000621188 64 ntBASIC0.87□□□□□ -2.27
CCDC163A0A0D9SF12 MIR2052-201ENST00000636055 55 ntBASIC0.87□□□□□ -2.27
CCDC163A0A0D9SF12 U7.3-201ENST00000616123 62 ntBASIC0.86□□□□□ -2.27
CCDC163A0A0D9SF12 RNU6-716P-201ENST00000365621 103 ntBASIC0.85□□□□□ -2.27
CCDC163A0A0D9SF12 MIR519A1-201ENST00000385257 85 ntBASIC0.85□□□□□ -2.27
CCDC163A0A0D9SF12 snoU13.11-201ENST00000459219 104 ntBASIC0.85□□□□□ -2.27
CCDC163A0A0D9SF12 MIR4714-201ENST00000580728 77 ntBASIC0.85□□□□□ -2.27
CCDC163A0A0D9SF12 AC092634.7-201ENST00000621022 103 ntBASIC0.85□□□□□ -2.27
CCDC163A0A0D9SF12 SNORD58A-201ENST00000383875 65 ntBASIC0.84□□□□□ -2.27
CCDC163A0A0D9SF12 RNU6-466P-201ENST00000391224 103 ntBASIC0.84□□□□□ -2.27
CCDC163A0A0D9SF12 RNA5SP227-201ENST00000516184 113 ntBASIC0.84□□□□□ -2.27
CCDC163A0A0D9SF12 RNU7-161P-201ENST00000517289 62 ntBASIC0.84□□□□□ -2.27
CCDC163A0A0D9SF12 MIR4698-201ENST00000577795 80 ntBASIC0.84□□□□□ -2.27
CCDC163A0A0D9SF12 RNU6-957P-201ENST00000363652 99 ntBASIC0.83□□□□□ -2.28
CCDC163A0A0D9SF12 RNA5SP47-201ENST00000517230 109 ntBASIC0.83□□□□□ -2.28
CCDC163A0A0D9SF12 Y_RNA.348-201ENST00000365403 103 ntBASIC0.82□□□□□ -2.28
CCDC163A0A0D9SF12 MIR193B-201ENST00000384907 83 ntBASIC0.82□□□□□ -2.28
CCDC163A0A0D9SF12 RNA5SP268-201ENST00000516828 124 ntBASIC0.82□□□□□ -2.28
CCDC163A0A0D9SF12 AL590095.2-201ENST00000604136 117 ntBASIC0.82□□□□□ -2.28
CCDC163A0A0D9SF12 TRDV1-202ENST00000621643 102 ntBASIC0.82□□□□□ -2.28
CCDC163A0A0D9SF12 AC067863.3-201ENST00000624172 122 ntBASIC0.82□□□□□ -2.28
CCDC163A0A0D9SF12 RNA5SP457-201ENST00000363657 124 ntBASIC0.81□□□□□ -2.28
CCDC163A0A0D9SF12 RNA5SP517-201ENST00000364724 117 ntBASIC0.81□□□□□ -2.28
CCDC163A0A0D9SF12 MIR146A-201ENST00000385201 99 ntBASIC0.81□□□□□ -2.28
CCDC163A0A0D9SF12 SCARNA16.5-201ENST00000517114 183 ntBASIC0.81□□□□□ -2.28
CCDC163A0A0D9SF12 MIR1273G-201ENST00000577677 100 ntBASIC0.81□□□□□ -2.28
CCDC163A0A0D9SF12 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
CCDC163A0A0D9SF12 SNORA36.1-201ENST00000363424 132 ntBASIC0.8□□□□□ -2.28
CCDC163A0A0D9SF12 Y_RNA.190-201ENST00000363964 101 ntBASIC0.8□□□□□ -2.28
CCDC163A0A0D9SF12 MIR936-201ENST00000401264 98 ntBASIC0.8□□□□□ -2.28
CCDC163A0A0D9SF12 RNU7-13P-201ENST00000516413 62 ntBASIC0.8□□□□□ -2.28
CCDC163A0A0D9SF12 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
CCDC163A0A0D9SF12 RNA5SP403-201ENST00000363598 108 ntBASIC0.79□□□□□ -2.28
CCDC163A0A0D9SF12 Y_RNA.374-201ENST00000365606 101 ntBASIC0.79□□□□□ -2.28
CCDC163A0A0D9SF12 RNU6-351P-201ENST00000516097 100 ntBASIC0.79□□□□□ -2.28
CCDC163A0A0D9SF12 RNU6-65P-201ENST00000516332 98 ntBASIC0.79□□□□□ -2.28
CCDC163A0A0D9SF12 MIR4536-1-201ENST00000583537 88 ntBASIC0.79□□□□□ -2.28
CCDC163A0A0D9SF12 SNORA25.18-201ENST00000607153 114 ntBASIC0.79□□□□□ -2.28
CCDC163A0A0D9SF12 MIR6835-201ENST00000621552 64 ntBASIC0.79□□□□□ -2.28
CCDC163A0A0D9SF12 AC010487.4-201ENST00000637027 61 ntBASIC0.79□□□□□ -2.28
CCDC163A0A0D9SF12 RNU6-905P-201ENST00000384434 107 ntBASIC0.78□□□□□ -2.28
CCDC163A0A0D9SF12 RNY4P30-201ENST00000410216 95 ntBASIC0.78□□□□□ -2.28
CCDC163A0A0D9SF12 RNU6-519P-201ENST00000410590 108 ntBASIC0.78□□□□□ -2.28
CCDC163A0A0D9SF12 Y_RNA.648-201ENST00000459455 110 ntBASIC0.78□□□□□ -2.28
CCDC163A0A0D9SF12 RNU6-158P-201ENST00000517104 100 ntBASIC0.78□□□□□ -2.28
CCDC163A0A0D9SF12 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.78□□□□□ -2.28
CCDC163A0A0D9SF12 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.78□□□□□ -2.28
CCDC163A0A0D9SF12 SNORD116-10-201ENST00000363791 102 ntBASIC0.77□□□□□ -2.29
CCDC163A0A0D9SF12 SNORD114-2-201ENST00000363953 78 ntBASIC0.77□□□□□ -2.29
CCDC163A0A0D9SF12 Y_RNA.283-201ENST00000364798 112 ntBASIC0.77□□□□□ -2.29
CCDC163A0A0D9SF12 Y_RNA.290-201ENST00000364879 114 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 197.9 ms