Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 Y_RNA.818-201ENST00000618813 71 ntBASIC1□□□□□ -2.25
SSX2IPQ9Y2D8 MIR450A1-201ENST00000362262 91 ntBASIC0.99□□□□□ -2.25
SSX2IPQ9Y2D8 RNU6-153P-201ENST00000364422 104 ntBASIC0.99□□□□□ -2.25
SSX2IPQ9Y2D8 Y_RNA.247-201ENST00000364500 92 ntBASIC0.99□□□□□ -2.25
SSX2IPQ9Y2D8 RNU6-147P-201ENST00000383983 107 ntBASIC0.99□□□□□ -2.25
SSX2IPQ9Y2D8 Y_RNA.544-201ENST00000384650 113 ntBASIC0.99□□□□□ -2.25
SSX2IPQ9Y2D8 MIR520H-201ENST00000385126 88 ntBASIC0.99□□□□□ -2.25
SSX2IPQ9Y2D8 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.99□□□□□ -2.25
SSX2IPQ9Y2D8 SCARNA23-201ENST00000516060 130 ntBASIC0.99□□□□□ -2.25
SSX2IPQ9Y2D8 MIR4661-201ENST00000582720 75 ntBASIC0.99□□□□□ -2.25
SSX2IPQ9Y2D8 MIR4439-201ENST00000583746 80 ntBASIC0.99□□□□□ -2.25
SSX2IPQ9Y2D8 RNU7-10P-201ENST00000607194 63 ntBASIC0.99□□□□□ -2.25
SSX2IPQ9Y2D8 RNU6-571P-201ENST00000384128 107 ntBASIC0.98□□□□□ -2.25
SSX2IPQ9Y2D8 MIR590-201ENST00000385008 97 ntBASIC0.98□□□□□ -2.25
SSX2IPQ9Y2D8 SNORA19.1-201ENST00000410656 129 ntBASIC0.98□□□□□ -2.25
SSX2IPQ9Y2D8 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.98□□□□□ -2.25
SSX2IPQ9Y2D8 Y_RNA.697-201ENST00000516776 113 ntBASIC0.98□□□□□ -2.25
SSX2IPQ9Y2D8 RNU6-448P-201ENST00000517052 107 ntBASIC0.98□□□□□ -2.25
SSX2IPQ9Y2D8 CYP3A137P-201ENST00000562436 69 ntBASIC0.98□□□□□ -2.25
SSX2IPQ9Y2D8 MIR3613-201ENST00000579844 87 ntBASIC0.98□□□□□ -2.25
SSX2IPQ9Y2D8 AC008608.1-201ENST00000603910 127 ntBASIC0.98□□□□□ -2.25
SSX2IPQ9Y2D8 Y_RNA.30-201ENST00000362572 97 ntBASIC0.97□□□□□ -2.25
SSX2IPQ9Y2D8 Y_RNA.56-201ENST00000362798 112 ntBASIC0.97□□□□□ -2.25
SSX2IPQ9Y2D8 RNU6-32P-201ENST00000383948 107 ntBASIC0.97□□□□□ -2.25
SSX2IPQ9Y2D8 RNU6-13P-201ENST00000384248 107 ntBASIC0.97□□□□□ -2.25
SSX2IPQ9Y2D8 RNU6-12P-201ENST00000384604 107 ntBASIC0.97□□□□□ -2.25
SSX2IPQ9Y2D8 RNU6-41P-201ENST00000384741 107 ntBASIC0.97□□□□□ -2.25
SSX2IPQ9Y2D8 SNRPGP12-201ENST00000449481 213 ntBASIC0.97□□□□□ -2.25
SSX2IPQ9Y2D8 MIR548H5-201ENST00000580314 60 ntBASIC0.97□□□□□ -2.25
SSX2IPQ9Y2D8 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.97□□□□□ -2.25
SSX2IPQ9Y2D8 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.97□□□□□ -2.25
SSX2IPQ9Y2D8 Y_RNA.536-201ENST00000384621 113 ntBASIC0.96□□□□□ -2.26
SSX2IPQ9Y2D8 BX276092.1-201ENST00000427368 251 ntBASIC0.96□□□□□ -2.26
SSX2IPQ9Y2D8 RNU6-537P-201ENST00000517277 103 ntBASIC0.96□□□□□ -2.26
SSX2IPQ9Y2D8 MIR3973-201ENST00000579824 107 ntBASIC0.96□□□□□ -2.26
SSX2IPQ9Y2D8 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.96□□□□□ -2.26
SSX2IPQ9Y2D8 Y_RNA.95-201ENST00000363079 95 ntBASIC0.95□□□□□ -2.26
SSX2IPQ9Y2D8 Y_RNA.96-201ENST00000363092 109 ntBASIC0.95□□□□□ -2.26
SSX2IPQ9Y2D8 Y_RNA.173-201ENST00000363776 113 ntBASIC0.95□□□□□ -2.26
SSX2IPQ9Y2D8 Y_RNA.567-201ENST00000384736 106 ntBASIC0.95□□□□□ -2.26
SSX2IPQ9Y2D8 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
SSX2IPQ9Y2D8 SNORD100-201ENST00000408573 76 ntBASIC0.95□□□□□ -2.26
SSX2IPQ9Y2D8 MTATP6P29-201ENST00000415057 132 ntBASIC0.95□□□□□ -2.26
SSX2IPQ9Y2D8 RNU6-850P-201ENST00000516934 103 ntBASIC0.95□□□□□ -2.26
SSX2IPQ9Y2D8 RNU6-170P-201ENST00000362832 104 ntBASIC0.94□□□□□ -2.26
SSX2IPQ9Y2D8 Y_RNA.93-201ENST00000363066 109 ntBASIC0.94□□□□□ -2.26
SSX2IPQ9Y2D8 Y_RNA.107-201ENST00000363190 121 ntBASIC0.94□□□□□ -2.26
SSX2IPQ9Y2D8 RNU6-1163P-201ENST00000364516 107 ntBASIC0.94□□□□□ -2.26
SSX2IPQ9Y2D8 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
SSX2IPQ9Y2D8 RNU6-535P-201ENST00000384722 107 ntBASIC0.94□□□□□ -2.26
SSX2IPQ9Y2D8 MIR635-201ENST00000384830 98 ntBASIC0.94□□□□□ -2.26
SSX2IPQ9Y2D8 AC109327.2-201ENST00000448339 378 ntBASIC0.94□□□□□ -2.26
SSX2IPQ9Y2D8 RNU6-1125P-201ENST00000363601 107 ntBASIC0.93□□□□□ -2.26
SSX2IPQ9Y2D8 RNU6-1335P-201ENST00000365426 107 ntBASIC0.93□□□□□ -2.26
SSX2IPQ9Y2D8 RNU6-480P-201ENST00000384332 107 ntBASIC0.93□□□□□ -2.26
SSX2IPQ9Y2D8 Y_RNA.495-201ENST00000384435 112 ntBASIC0.93□□□□□ -2.26
SSX2IPQ9Y2D8 RNU6-109P-201ENST00000516364 107 ntBASIC0.93□□□□□ -2.26
SSX2IPQ9Y2D8 RNU6-184P-201ENST00000516514 107 ntBASIC0.93□□□□□ -2.26
SSX2IPQ9Y2D8 RNU6-158P-201ENST00000517104 100 ntBASIC0.93□□□□□ -2.26
SSX2IPQ9Y2D8 MIR2052-201ENST00000636055 55 ntBASIC0.93□□□□□ -2.26
SSX2IPQ9Y2D8 Y_RNA.174-201ENST00000363781 105 ntBASIC0.92□□□□□ -2.26
SSX2IPQ9Y2D8 RNA5SP117-201ENST00000365294 118 ntBASIC0.92□□□□□ -2.26
SSX2IPQ9Y2D8 Y_RNA.342-201ENST00000365352 113 ntBASIC0.92□□□□□ -2.26
SSX2IPQ9Y2D8 MIR573-201ENST00000384964 99 ntBASIC0.92□□□□□ -2.26
SSX2IPQ9Y2D8 SNORD99-201ENST00000408612 74 ntBASIC0.92□□□□□ -2.26
SSX2IPQ9Y2D8 AC002350.1-201ENST00000490759 375 ntBASIC0.92□□□□□ -2.26
SSX2IPQ9Y2D8 RNU6-795P-201ENST00000516323 103 ntBASIC0.92□□□□□ -2.26
SSX2IPQ9Y2D8 AC012531.4-201ENST00000616509 177 ntBASIC0.92□□□□□ -2.26
SSX2IPQ9Y2D8 RNU6-813P-201ENST00000384691 107 ntBASIC0.91□□□□□ -2.26
SSX2IPQ9Y2D8 RNU6-291P-201ENST00000384720 107 ntBASIC0.91□□□□□ -2.26
SSX2IPQ9Y2D8 SNORA40.13-201ENST00000516379 120 ntBASIC0.91□□□□□ -2.26
SSX2IPQ9Y2D8 AC138907.6-201ENST00000568401 126 ntBASIC0.91□□□□□ -2.26
SSX2IPQ9Y2D8 AC138869.1-201ENST00000568623 124 ntBASIC0.91□□□□□ -2.26
SSX2IPQ9Y2D8 MIR4777-201ENST00000583710 86 ntBASIC0.91□□□□□ -2.26
SSX2IPQ9Y2D8 RNU6-86P-201ENST00000606534 107 ntBASIC0.91□□□□□ -2.26
SSX2IPQ9Y2D8 AP001318.4-201ENST00000616637 121 ntBASIC0.91□□□□□ -2.26
SSX2IPQ9Y2D8 AC091304.10-201ENST00000641554 121 ntBASIC0.91□□□□□ -2.26
SSX2IPQ9Y2D8 MIR193B-201ENST00000384907 83 ntBASIC0.9□□□□□ -2.27
SSX2IPQ9Y2D8 MIR146A-201ENST00000385201 99 ntBASIC0.9□□□□□ -2.27
SSX2IPQ9Y2D8 MIR4698-201ENST00000577795 80 ntBASIC0.9□□□□□ -2.27
SSX2IPQ9Y2D8 MIR4653-201ENST00000585107 83 ntBASIC0.9□□□□□ -2.27
SSX2IPQ9Y2D8 AL353765.1-201ENST00000605514 183 ntBASIC0.9□□□□□ -2.27
SSX2IPQ9Y2D8 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.9□□□□□ -2.27
SSX2IPQ9Y2D8 RNU6-1244P-201ENST00000363614 108 ntBASIC0.89□□□□□ -2.27
SSX2IPQ9Y2D8 AC092628.1-201ENST00000436250 252 ntBASIC0.89□□□□□ -2.27
SSX2IPQ9Y2D8 RNU6-168P-201ENST00000516189 101 ntBASIC0.89□□□□□ -2.27
SSX2IPQ9Y2D8 Y_RNA.705-201ENST00000516862 110 ntBASIC0.89□□□□□ -2.27
SSX2IPQ9Y2D8 Y_RNA.57-201ENST00000362806 113 ntBASIC0.88□□□□□ -2.27
SSX2IPQ9Y2D8 MIR519A1-201ENST00000385257 85 ntBASIC0.88□□□□□ -2.27
SSX2IPQ9Y2D8 RNU6-972P-201ENST00000391208 107 ntBASIC0.88□□□□□ -2.27
SSX2IPQ9Y2D8 SNORD63B-201ENST00000411005 70 ntBASIC0.88□□□□□ -2.27
SSX2IPQ9Y2D8 MTATP8P2-201ENST00000435212 202 ntBASIC0.88□□□□□ -2.27
SSX2IPQ9Y2D8 TRAJ51-201ENST00000504127 63 ntBASIC0.88□□□□□ -2.27
SSX2IPQ9Y2D8 Y_RNA.677-201ENST00000516401 85 ntBASIC0.88□□□□□ -2.27
SSX2IPQ9Y2D8 MIR1273G-201ENST00000577677 100 ntBASIC0.88□□□□□ -2.27
SSX2IPQ9Y2D8 AC011195.1-201ENST00000578177 177 ntBASIC0.88□□□□□ -2.27
SSX2IPQ9Y2D8 uc_338.16-201ENST00000621804 95 ntBASIC0.88□□□□□ -2.27
SSX2IPQ9Y2D8 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.88□□□□□ -2.27
SSX2IPQ9Y2D8 RNU4-45P-201ENST00000365469 141 ntBASIC0.87□□□□□ -2.27
SSX2IPQ9Y2D8 Y_RNA.467-201ENST00000384297 102 ntBASIC0.87□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 202.4 ms