Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 Y_RNA.536-201ENST00000384621 113 ntBASIC2.28□□□□□ -2.04
ZC3H4Q9UPT8 AC003989.2-201ENST00000440224 169 ntBASIC2.28□□□□□ -2.04
ZC3H4Q9UPT8 RNU7-195P-201ENST00000458793 62 ntBASIC2.28□□□□□ -2.04
ZC3H4Q9UPT8 RNU6-75P-201ENST00000515944 104 ntBASIC2.28□□□□□ -2.04
ZC3H4Q9UPT8 MIR3664-201ENST00000579074 99 ntBASIC2.28□□□□□ -2.04
ZC3H4Q9UPT8 Y_RNA.13-201ENST00000362403 112 ntBASIC2.27□□□□□ -2.05
ZC3H4Q9UPT8 RNU6-686P-201ENST00000364839 107 ntBASIC2.27□□□□□ -2.05
ZC3H4Q9UPT8 RNU6-580P-201ENST00000365159 107 ntBASIC2.27□□□□□ -2.05
ZC3H4Q9UPT8 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
ZC3H4Q9UPT8 MIR302D-201ENST00000362275 68 ntBASIC2.26□□□□□ -2.05
ZC3H4Q9UPT8 TRAJ51-201ENST00000504127 63 ntBASIC2.26□□□□□ -2.05
ZC3H4Q9UPT8 FGF7P7-201ENST00000514120 227 ntBASIC2.26□□□□□ -2.05
ZC3H4Q9UPT8 RNA5SP480-201ENST00000516840 109 ntBASIC2.26□□□□□ -2.05
ZC3H4Q9UPT8 VPS35-212ENST00000640313 141 ntTSL 5 BASIC2.26□□□□□ -2.05
ZC3H4Q9UPT8 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.26□□□□□ -2.05
ZC3H4Q9UPT8 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.25□□□□□ -2.05
ZC3H4Q9UPT8 Y_RNA.327-201ENST00000365201 102 ntBASIC2.25□□□□□ -2.05
ZC3H4Q9UPT8 Y_RNA.545-201ENST00000384652 105 ntBASIC2.25□□□□□ -2.05
ZC3H4Q9UPT8 RNU6ATAC6P-201ENST00000408132 126 ntBASIC2.25□□□□□ -2.05
ZC3H4Q9UPT8 AC025033.1-201ENST00000463883 194 ntBASIC2.25□□□□□ -2.05
ZC3H4Q9UPT8 RNU6-165P-201ENST00000517170 99 ntBASIC2.25□□□□□ -2.05
ZC3H4Q9UPT8 MIR4771-2-201ENST00000577758 74 ntBASIC2.25□□□□□ -2.05
ZC3H4Q9UPT8 MIR548H5-201ENST00000580314 60 ntBASIC2.25□□□□□ -2.05
ZC3H4Q9UPT8 MIR4771-1-201ENST00000582617 74 ntBASIC2.25□□□□□ -2.05
ZC3H4Q9UPT8 RNU7-10P-201ENST00000607194 63 ntBASIC2.25□□□□□ -2.05
ZC3H4Q9UPT8 FAS-AS1.1-201ENST00000615327 126 ntBASIC2.25□□□□□ -2.05
ZC3H4Q9UPT8 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.25□□□□□ -2.05
ZC3H4Q9UPT8 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
ZC3H4Q9UPT8 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
ZC3H4Q9UPT8 RNU6-557P-201ENST00000516842 110 ntBASIC2.24□□□□□ -2.05
ZC3H4Q9UPT8 Y_RNA.788-201ENST00000622394 112 ntBASIC2.24□□□□□ -2.05
ZC3H4Q9UPT8 MIRLET7A1-201ENST00000362295 80 ntBASIC2.23□□□□□ -2.05
ZC3H4Q9UPT8 RNU6-934P-201ENST00000365154 107 ntBASIC2.23□□□□□ -2.05
ZC3H4Q9UPT8 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC2.23□□□□□ -2.05
ZC3H4Q9UPT8 AC048334.1-201ENST00000477975 159 ntBASIC2.23□□□□□ -2.05
ZC3H4Q9UPT8 Y_RNA.809-201ENST00000516058 95 ntBASIC2.23□□□□□ -2.05
ZC3H4Q9UPT8 AL512310.8-201ENST00000550183 120 ntBASIC2.23□□□□□ -2.05
ZC3H4Q9UPT8 MIR6082-201ENST00000613604 109 ntBASIC2.23□□□□□ -2.05
ZC3H4Q9UPT8 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
ZC3H4Q9UPT8 AC139453.2-201ENST00000487255 133 ntBASIC2.22□□□□□ -2.05
ZC3H4Q9UPT8 Y_RNA.660-201ENST00000516002 120 ntBASIC2.22□□□□□ -2.05
ZC3H4Q9UPT8 Y_RNA.697-201ENST00000516776 113 ntBASIC2.22□□□□□ -2.05
ZC3H4Q9UPT8 MIR4484-201ENST00000582855 83 ntBASIC2.22□□□□□ -2.05
ZC3H4Q9UPT8 MIR502-201ENST00000606349 86 ntBASIC2.22□□□□□ -2.05
ZC3H4Q9UPT8 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC2.22□□□□□ -2.05
ZC3H4Q9UPT8 SNORD113.3-201ENST00000364630 78 ntBASIC2.21□□□□□ -2.06
ZC3H4Q9UPT8 SNORD77.2-201ENST00000391045 68 ntBASIC2.21□□□□□ -2.06
ZC3H4Q9UPT8 RN7SKP88-201ENST00000516847 250 ntBASIC2.21□□□□□ -2.06
ZC3H4Q9UPT8 MIR4285-201ENST00000581001 85 ntBASIC2.21□□□□□ -2.06
ZC3H4Q9UPT8 7SK.8-201ENST00000612110 250 ntBASIC2.21□□□□□ -2.06
ZC3H4Q9UPT8 7SK.11-201ENST00000615477 250 ntBASIC2.21□□□□□ -2.06
ZC3H4Q9UPT8 7SK.13-201ENST00000622040 250 ntBASIC2.21□□□□□ -2.06
ZC3H4Q9UPT8 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
ZC3H4Q9UPT8 RNU1-78P-201ENST00000391248 165 ntBASIC2.2□□□□□ -2.06
ZC3H4Q9UPT8 AC023827.1-201ENST00000569247 97 ntBASIC2.2□□□□□ -2.06
ZC3H4Q9UPT8 TRDV1-202ENST00000621643 102 ntBASIC2.2□□□□□ -2.06
ZC3H4Q9UPT8 AC092628.1-201ENST00000436250 252 ntBASIC2.19□□□□□ -2.06
ZC3H4Q9UPT8 SCARNA18B-201ENST00000458806 135 ntBASIC2.19□□□□□ -2.06
ZC3H4Q9UPT8 SNORA31.2-201ENST00000516019 134 ntBASIC2.19□□□□□ -2.06
ZC3H4Q9UPT8 MIR8081-201ENST00000611533 95 ntBASIC2.19□□□□□ -2.06
ZC3H4Q9UPT8 uc_338.20-201ENST00000621563 178 ntBASIC2.19□□□□□ -2.06
ZC3H4Q9UPT8 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.19□□□□□ -2.06
ZC3H4Q9UPT8 RNU6-208P-201ENST00000362431 107 ntBASIC2.18□□□□□ -2.06
ZC3H4Q9UPT8 Y_RNA.56-201ENST00000362798 112 ntBASIC2.18□□□□□ -2.06
ZC3H4Q9UPT8 SNORA75.2-201ENST00000391138 150 ntBASIC2.18□□□□□ -2.06
ZC3H4Q9UPT8 SNORA75.3-201ENST00000391231 150 ntBASIC2.18□□□□□ -2.06
ZC3H4Q9UPT8 RNU6-1054P-201ENST00000411293 104 ntBASIC2.18□□□□□ -2.06
ZC3H4Q9UPT8 RNU1-40P-201ENST00000516816 164 ntBASIC2.18□□□□□ -2.06
ZC3H4Q9UPT8 RNU1-97P-201ENST00000516872 164 ntBASIC2.18□□□□□ -2.06
ZC3H4Q9UPT8 RMST_2.1-201ENST00000617263 136 ntBASIC2.18□□□□□ -2.06
ZC3H4Q9UPT8 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
ZC3H4Q9UPT8 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
ZC3H4Q9UPT8 RNU6-42P-201ENST00000384165 107 ntBASIC2.17□□□□□ -2.06
ZC3H4Q9UPT8 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
ZC3H4Q9UPT8 SUMO2P12-201ENST00000405924 140 ntBASIC2.17□□□□□ -2.06
ZC3H4Q9UPT8 AL606490.4-201ENST00000423117 127 ntBASIC2.17□□□□□ -2.06
ZC3H4Q9UPT8 AC004223.1-201ENST00000479840 271 ntBASIC2.17□□□□□ -2.06
ZC3H4Q9UPT8 AC036111.3-201ENST00000526389 112 ntBASIC2.17□□□□□ -2.06
ZC3H4Q9UPT8 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC2.17□□□□□ -2.06
ZC3H4Q9UPT8 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
ZC3H4Q9UPT8 RNA5SP325-201ENST00000363756 130 ntBASIC2.17□□□□□ -2.06
ZC3H4Q9UPT8 MIR125B2-201ENST00000385128 89 ntBASIC2.17□□□□□ -2.06
ZC3H4Q9UPT8 RNU6-807P-201ENST00000516805 107 ntBASIC2.17□□□□□ -2.06
ZC3H4Q9UPT8 RNU7-156P-201ENST00000517214 74 ntBASIC2.17□□□□□ -2.06
ZC3H4Q9UPT8 MIR4452-201ENST00000583004 71 ntBASIC2.17□□□□□ -2.06
ZC3H4Q9UPT8 Y_RNA.239-201ENST00000364444 113 ntBASIC2.16□□□□□ -2.06
ZC3H4Q9UPT8 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
ZC3H4Q9UPT8 RNU6-364P-201ENST00000384387 107 ntBASIC2.16□□□□□ -2.06
ZC3H4Q9UPT8 SNORD90-201ENST00000391145 111 ntBASIC2.16□□□□□ -2.06
ZC3H4Q9UPT8 RNU1-123P-201ENST00000458950 160 ntBASIC2.16□□□□□ -2.06
ZC3H4Q9UPT8 MIR3134-201ENST00000579433 74 ntBASIC2.16□□□□□ -2.06
ZC3H4Q9UPT8 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC2.15□□□□□ -2.06
ZC3H4Q9UPT8 RNU5F-1-201ENST00000362507 117 ntBASIC2.15□□□□□ -2.07
ZC3H4Q9UPT8 RNU6-994P-201ENST00000410507 111 ntBASIC2.15□□□□□ -2.07
ZC3H4Q9UPT8 RNU7-40P-201ENST00000516397 64 ntBASIC2.15□□□□□ -2.07
ZC3H4Q9UPT8 RNU6-765P-201ENST00000516916 99 ntBASIC2.15□□□□□ -2.07
ZC3H4Q9UPT8 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC2.15□□□□□ -2.07
ZC3H4Q9UPT8 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
ZC3H4Q9UPT8 Y_RNA.264-201ENST00000364665 102 ntBASIC2.14□□□□□ -2.07
ZC3H4Q9UPT8 RPS27P16-201ENST00000425758 201 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 194.1 ms