Protein–RNA interactions for Protein: Q9UPN6

SCAF8, Protein SCAF8, humanhuman

Known RBP Predictions only

Length 1,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8Q9UPN6 MIR1257-201ENST00000408490 117 ntBASIC1.12□□□□□ -2.23
SCAF8Q9UPN6 MIR1285-1-201ENST00000408593 84 ntBASIC1.12□□□□□ -2.23
SCAF8Q9UPN6 AC067940.1-201ENST00000458411 300 ntBASIC1.12□□□□□ -2.23
SCAF8Q9UPN6 SNORA25.16-201ENST00000516741 121 ntBASIC1.12□□□□□ -2.23
SCAF8Q9UPN6 MTND5P40-201ENST00000559945 246 ntBASIC1.12□□□□□ -2.23
SCAF8Q9UPN6 MIR4771-2-201ENST00000577758 74 ntBASIC1.12□□□□□ -2.23
SCAF8Q9UPN6 MIR4500-201ENST00000579472 76 ntBASIC1.12□□□□□ -2.23
SCAF8Q9UPN6 MIR4771-1-201ENST00000582617 74 ntBASIC1.12□□□□□ -2.23
SCAF8Q9UPN6 AC020891.4-201ENST00000605745 93 ntBASIC1.12□□□□□ -2.23
SCAF8Q9UPN6 RNU6-86P-201ENST00000606534 107 ntBASIC1.12□□□□□ -2.23
SCAF8Q9UPN6 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.12□□□□□ -2.23
SCAF8Q9UPN6 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
SCAF8Q9UPN6 RNU6-403P-201ENST00000363163 104 ntBASIC1.11□□□□□ -2.23
SCAF8Q9UPN6 RNU6-1131P-201ENST00000364955 107 ntBASIC1.11□□□□□ -2.23
SCAF8Q9UPN6 Y_RNA.342-201ENST00000365352 113 ntBASIC1.11□□□□□ -2.23
SCAF8Q9UPN6 MIR532-201ENST00000385025 91 ntBASIC1.11□□□□□ -2.23
SCAF8Q9UPN6 RPS26P5-201ENST00000418544 335 ntBASIC1.11□□□□□ -2.23
SCAF8Q9UPN6 U7.7-201ENST00000459276 60 ntBASIC1.11□□□□□ -2.23
SCAF8Q9UPN6 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.11□□□□□ -2.23
SCAF8Q9UPN6 MALAT1.1-201ENST00000618249 95 ntBASIC1.11□□□□□ -2.23
SCAF8Q9UPN6 Y_RNA.173-201ENST00000363776 113 ntBASIC1.1□□□□□ -2.23
SCAF8Q9UPN6 Y_RNA.369-201ENST00000365568 117 ntBASIC1.1□□□□□ -2.23
SCAF8Q9UPN6 SNORA72.6-201ENST00000384520 129 ntBASIC1.1□□□□□ -2.23
SCAF8Q9UPN6 RNU6-813P-201ENST00000384691 107 ntBASIC1.1□□□□□ -2.23
SCAF8Q9UPN6 Y_RNA.567-201ENST00000384736 106 ntBASIC1.1□□□□□ -2.23
SCAF8Q9UPN6 RNU6-994P-201ENST00000410507 111 ntBASIC1.1□□□□□ -2.23
SCAF8Q9UPN6 RNU4-83P-201ENST00000410863 133 ntBASIC1.1□□□□□ -2.23
SCAF8Q9UPN6 RNU6-531P-201ENST00000516694 104 ntBASIC1.1□□□□□ -2.23
SCAF8Q9UPN6 RNU6-369P-201ENST00000362515 102 ntBASIC1.09□□□□□ -2.23
SCAF8Q9UPN6 RNU6-49P-201ENST00000384256 107 ntBASIC1.09□□□□□ -2.23
SCAF8Q9UPN6 MIR125B2-201ENST00000385128 89 ntBASIC1.09□□□□□ -2.23
SCAF8Q9UPN6 MIR942-201ENST00000401111 86 ntBASIC1.09□□□□□ -2.23
SCAF8Q9UPN6 RNU6-1110P-201ENST00000516462 101 ntBASIC1.09□□□□□ -2.23
SCAF8Q9UPN6 Y_RNA.705-201ENST00000516862 110 ntBASIC1.09□□□□□ -2.23
SCAF8Q9UPN6 MIR4676-201ENST00000583078 72 ntBASIC1.09□□□□□ -2.23
SCAF8Q9UPN6 Y_RNA.13-201ENST00000362403 112 ntBASIC1.08□□□□□ -2.24
SCAF8Q9UPN6 Y_RNA.96-201ENST00000363092 109 ntBASIC1.08□□□□□ -2.24
SCAF8Q9UPN6 RNU4-58P-201ENST00000363192 141 ntBASIC1.08□□□□□ -2.24
SCAF8Q9UPN6 RNU6-1244P-201ENST00000363614 108 ntBASIC1.08□□□□□ -2.24
SCAF8Q9UPN6 Y_RNA.290-201ENST00000364879 114 ntBASIC1.08□□□□□ -2.24
SCAF8Q9UPN6 RNY1P7-201ENST00000384743 110 ntBASIC1.08□□□□□ -2.24
SCAF8Q9UPN6 BX276092.1-201ENST00000427368 251 ntBASIC1.08□□□□□ -2.24
SCAF8Q9UPN6 SNRPGP12-201ENST00000449481 213 ntBASIC1.08□□□□□ -2.24
SCAF8Q9UPN6 RNU6-162P-201ENST00000516228 103 ntBASIC1.08□□□□□ -2.24
SCAF8Q9UPN6 AC025627.3-201ENST00000582078 182 ntBASIC1.08□□□□□ -2.24
SCAF8Q9UPN6 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.08□□□□□ -2.24
SCAF8Q9UPN6 U7.3-201ENST00000616123 62 ntBASIC1.08□□□□□ -2.24
SCAF8Q9UPN6 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.08□□□□□ -2.24
SCAF8Q9UPN6 Y_RNA.220-201ENST00000364244 109 ntBASIC1.07□□□□□ -2.24
SCAF8Q9UPN6 RNU6-972P-201ENST00000391208 107 ntBASIC1.07□□□□□ -2.24
SCAF8Q9UPN6 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.07□□□□□ -2.24
SCAF8Q9UPN6 RNU6-887P-201ENST00000410660 100 ntBASIC1.07□□□□□ -2.24
SCAF8Q9UPN6 SNORD124-201ENST00000459577 104 ntBASIC1.07□□□□□ -2.24
SCAF8Q9UPN6 AC103810.9-201ENST00000606688 112 ntBASIC1.07□□□□□ -2.24
SCAF8Q9UPN6 AC103810.7-201ENST00000607821 91 ntBASIC1.07□□□□□ -2.24
SCAF8Q9UPN6 MIR6082-201ENST00000613604 109 ntBASIC1.07□□□□□ -2.24
SCAF8Q9UPN6 MIR8066-201ENST00000617280 78 ntBASIC1.07□□□□□ -2.24
SCAF8Q9UPN6 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
SCAF8Q9UPN6 RNU6-571P-201ENST00000384128 107 ntBASIC1.06□□□□□ -2.24
SCAF8Q9UPN6 RNU6ATAC27P-201ENST00000408289 119 ntBASIC1.06□□□□□ -2.24
SCAF8Q9UPN6 RNU6-850P-201ENST00000516934 103 ntBASIC1.06□□□□□ -2.24
SCAF8Q9UPN6 RNU7-156P-201ENST00000517214 74 ntBASIC1.06□□□□□ -2.24
SCAF8Q9UPN6 MIR1-1-201ENST00000362147 71 ntBASIC1.05□□□□□ -2.24
SCAF8Q9UPN6 Y_RNA.42-201ENST00000362660 108 ntBASIC1.05□□□□□ -2.24
SCAF8Q9UPN6 MIR100-201ENST00000385259 80 ntBASIC1.05□□□□□ -2.24
SCAF8Q9UPN6 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.05□□□□□ -2.24
SCAF8Q9UPN6 RNA5SP255-201ENST00000516370 107 ntBASIC1.05□□□□□ -2.24
SCAF8Q9UPN6 AC006254.2-201ENST00000603259 279 ntBASIC1.05□□□□□ -2.24
SCAF8Q9UPN6 AC013244.2-201ENST00000603396 103 ntBASIC1.05□□□□□ -2.24
SCAF8Q9UPN6 MIR6857-201ENST00000613267 93 ntBASIC1.05□□□□□ -2.24
SCAF8Q9UPN6 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.04□□□□□ -2.24
SCAF8Q9UPN6 SNORD58A-201ENST00000383875 65 ntBASIC1.04□□□□□ -2.24
SCAF8Q9UPN6 MIR181B2-201ENST00000385004 89 ntBASIC1.04□□□□□ -2.24
SCAF8Q9UPN6 MIR938-201ENST00000401216 83 ntBASIC1.04□□□□□ -2.24
SCAF8Q9UPN6 RNU6-1194P-201ENST00000516208 104 ntBASIC1.04□□□□□ -2.24
SCAF8Q9UPN6 RNU6-977P-201ENST00000516411 103 ntBASIC1.04□□□□□ -2.24
SCAF8Q9UPN6 RNU6-765P-201ENST00000516916 99 ntBASIC1.04□□□□□ -2.24
SCAF8Q9UPN6 RNU6-844P-201ENST00000517175 102 ntBASIC1.04□□□□□ -2.24
SCAF8Q9UPN6 MIR4804-201ENST00000581683 73 ntBASIC1.04□□□□□ -2.24
SCAF8Q9UPN6 SNORD92-201ENST00000585078 85 ntBASIC1.04□□□□□ -2.24
SCAF8Q9UPN6 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.04□□□□□ -2.24
SCAF8Q9UPN6 RNU6-1125P-201ENST00000363601 107 ntBASIC1.03□□□□□ -2.24
SCAF8Q9UPN6 Y_RNA.190-201ENST00000363964 101 ntBASIC1.03□□□□□ -2.24
SCAF8Q9UPN6 RNU6-294P-201ENST00000364999 102 ntBASIC1.03□□□□□ -2.24
SCAF8Q9UPN6 RNU6-480P-201ENST00000384332 107 ntBASIC1.03□□□□□ -2.24
SCAF8Q9UPN6 RNU6-364P-201ENST00000384387 107 ntBASIC1.03□□□□□ -2.24
SCAF8Q9UPN6 MIR1827-201ENST00000408549 66 ntBASIC1.03□□□□□ -2.24
SCAF8Q9UPN6 SNORD100-201ENST00000408573 76 ntBASIC1.02□□□□□ -2.25
SCAF8Q9UPN6 RNU7-56P-201ENST00000458744 62 ntBASIC1.02□□□□□ -2.25
SCAF8Q9UPN6 RNU7-102P-201ENST00000458948 62 ntBASIC1.02□□□□□ -2.25
SCAF8Q9UPN6 AC008608.1-201ENST00000603910 127 ntBASIC1.02□□□□□ -2.25
SCAF8Q9UPN6 AC025521.1-201ENST00000621624 286 ntBASIC1.02□□□□□ -2.25
SCAF8Q9UPN6 MIR101-2-201ENST00000362195 79 ntBASIC1.01□□□□□ -2.25
SCAF8Q9UPN6 Y_RNA.57-201ENST00000362806 113 ntBASIC1.01□□□□□ -2.25
SCAF8Q9UPN6 SNORD116-10-201ENST00000363791 102 ntBASIC1.01□□□□□ -2.25
SCAF8Q9UPN6 MIR520F-201ENST00000384824 87 ntBASIC1.01□□□□□ -2.25
SCAF8Q9UPN6 AL513043.2-201ENST00000573941 143 ntBASIC1.01□□□□□ -2.25
SCAF8Q9UPN6 MIR4679-1-201ENST00000637619 75 ntBASIC1.01□□□□□ -2.25
SCAF8Q9UPN6 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1□□□□□ -2.25
SCAF8Q9UPN6 Y_RNA.56-201ENST00000362798 112 ntBASIC1□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 203.2 ms