Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 RNU6-934P-201ENST00000365154 107 ntBASIC1.75□□□□□ -2.13
AP4E1Q9UPM8 Y_RNA.532-201ENST00000384590 113 ntBASIC1.75□□□□□ -2.13
AP4E1Q9UPM8 Y_RNA.565-201ENST00000384719 101 ntBASIC1.75□□□□□ -2.13
AP4E1Q9UPM8 MIR125B2-201ENST00000385128 89 ntBASIC1.75□□□□□ -2.13
AP4E1Q9UPM8 MIR518E-201ENST00000385252 88 ntBASIC1.75□□□□□ -2.13
AP4E1Q9UPM8 RNU6-1108P-201ENST00000516308 104 ntBASIC1.75□□□□□ -2.13
AP4E1Q9UPM8 RN7SKP88-201ENST00000516847 250 ntBASIC1.75□□□□□ -2.13
AP4E1Q9UPM8 MIR4771-2-201ENST00000577758 74 ntBASIC1.75□□□□□ -2.13
AP4E1Q9UPM8 MIR4771-1-201ENST00000582617 74 ntBASIC1.75□□□□□ -2.13
AP4E1Q9UPM8 7SK.8-201ENST00000612110 250 ntBASIC1.75□□□□□ -2.13
AP4E1Q9UPM8 7SK.11-201ENST00000615477 250 ntBASIC1.75□□□□□ -2.13
AP4E1Q9UPM8 AL353997.5-201ENST00000618886 171 ntBASIC1.75□□□□□ -2.13
AP4E1Q9UPM8 7SK.13-201ENST00000622040 250 ntBASIC1.75□□□□□ -2.13
AP4E1Q9UPM8 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.75□□□□□ -2.13
AP4E1Q9UPM8 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.75□□□□□ -2.13
AP4E1Q9UPM8 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
AP4E1Q9UPM8 SNORD90-201ENST00000391145 111 ntBASIC1.74□□□□□ -2.13
AP4E1Q9UPM8 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
AP4E1Q9UPM8 MIR934-201ENST00000401241 83 ntBASIC1.74□□□□□ -2.13
AP4E1Q9UPM8 AC097635.1-201ENST00000450678 155 ntBASIC1.74□□□□□ -2.13
AP4E1Q9UPM8 Y_RNA.809-201ENST00000516058 95 ntBASIC1.74□□□□□ -2.13
AP4E1Q9UPM8 RNU6-448P-201ENST00000517052 107 ntBASIC1.74□□□□□ -2.13
AP4E1Q9UPM8 AC106800.4-201ENST00000614905 153 ntBASIC1.74□□□□□ -2.13
AP4E1Q9UPM8 TRDV1-202ENST00000621643 102 ntBASIC1.74□□□□□ -2.13
AP4E1Q9UPM8 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.74□□□□□ -2.13
AP4E1Q9UPM8 RNU1-78P-201ENST00000391248 165 ntBASIC1.73□□□□□ -2.13
AP4E1Q9UPM8 SNORA26.9-201ENST00000391322 122 ntBASIC1.73□□□□□ -2.13
AP4E1Q9UPM8 AC004223.1-201ENST00000479840 271 ntBASIC1.73□□□□□ -2.13
AP4E1Q9UPM8 AC139453.2-201ENST00000487255 133 ntBASIC1.73□□□□□ -2.13
AP4E1Q9UPM8 RNU7-40P-201ENST00000516397 64 ntBASIC1.73□□□□□ -2.13
AP4E1Q9UPM8 MIR4422-201ENST00000581938 83 ntBASIC1.73□□□□□ -2.13
AP4E1Q9UPM8 AL645939.4-201ENST00000604495 135 ntBASIC1.73□□□□□ -2.13
AP4E1Q9UPM8 FAS-AS1.1-201ENST00000615327 126 ntBASIC1.73□□□□□ -2.13
AP4E1Q9UPM8 MIR764-201ENST00000390811 85 ntBASIC1.72□□□□□ -2.13
AP4E1Q9UPM8 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.72□□□□□ -2.13
AP4E1Q9UPM8 SCARNA18B-201ENST00000458806 135 ntBASIC1.72□□□□□ -2.13
AP4E1Q9UPM8 RNA5SP458-201ENST00000516188 119 ntBASIC1.72□□□□□ -2.13
AP4E1Q9UPM8 Y_RNA.697-201ENST00000516776 113 ntBASIC1.72□□□□□ -2.13
AP4E1Q9UPM8 RNU6-369P-201ENST00000362515 102 ntBASIC1.71□□□□□ -2.14
AP4E1Q9UPM8 SNORD77.2-201ENST00000391045 68 ntBASIC1.71□□□□□ -2.14
AP4E1Q9UPM8 SNORD111-201ENST00000408139 94 ntBASIC1.71□□□□□ -2.14
AP4E1Q9UPM8 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.71□□□□□ -2.14
AP4E1Q9UPM8 RPS26P5-201ENST00000418544 335 ntBASIC1.71□□□□□ -2.14
AP4E1Q9UPM8 RNU7-21P-201ENST00000459430 62 ntBASIC1.71□□□□□ -2.14
AP4E1Q9UPM8 RNU6-523P-201ENST00000516304 54 ntBASIC1.71□□□□□ -2.14
AP4E1Q9UPM8 SNORA25.15-201ENST00000516487 89 ntBASIC1.71□□□□□ -2.14
AP4E1Q9UPM8 AC023827.1-201ENST00000569247 97 ntBASIC1.71□□□□□ -2.14
AP4E1Q9UPM8 MIR4255-201ENST00000579351 72 ntBASIC1.71□□□□□ -2.14
AP4E1Q9UPM8 MIR502-201ENST00000606349 86 ntBASIC1.71□□□□□ -2.14
AP4E1Q9UPM8 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
AP4E1Q9UPM8 RNA5SP363-201ENST00000365072 115 ntBASIC1.7□□□□□ -2.14
AP4E1Q9UPM8 Y_RNA.545-201ENST00000384652 105 ntBASIC1.7□□□□□ -2.14
AP4E1Q9UPM8 MIR4676-201ENST00000583078 72 ntBASIC1.7□□□□□ -2.14
AP4E1Q9UPM8 U6.100-201ENST00000636230 99 ntBASIC1.7□□□□□ -2.14
AP4E1Q9UPM8 SNORA25.9-201ENST00000365087 128 ntBASIC1.69□□□□□ -2.14
AP4E1Q9UPM8 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
AP4E1Q9UPM8 AL591704.2-201ENST00000421658 181 ntBASIC1.69□□□□□ -2.14
AP4E1Q9UPM8 RNU7-156P-201ENST00000517214 74 ntBASIC1.69□□□□□ -2.14
AP4E1Q9UPM8 MTRNR2L2-201ENST00000604882 87 ntBASIC1.69□□□□□ -2.14
AP4E1Q9UPM8 RNA5SP99-201ENST00000364020 114 ntBASIC1.68□□□□□ -2.14
AP4E1Q9UPM8 RNU6-291P-201ENST00000384720 107 ntBASIC1.68□□□□□ -2.14
AP4E1Q9UPM8 RNU6-1265P-201ENST00000516342 103 ntBASIC1.68□□□□□ -2.14
AP4E1Q9UPM8 RNU6-902P-201ENST00000517212 91 ntBASIC1.68□□□□□ -2.14
AP4E1Q9UPM8 MIR599-201ENST00000385069 95 ntBASIC1.67□□□□□ -2.14
AP4E1Q9UPM8 RNU6-380P-201ENST00000410207 107 ntBASIC1.67□□□□□ -2.14
AP4E1Q9UPM8 MIR3134-201ENST00000579433 74 ntBASIC1.67□□□□□ -2.14
AP4E1Q9UPM8 RNU6-208P-201ENST00000362431 107 ntBASIC1.66□□□□□ -2.14
AP4E1Q9UPM8 RNA5SP245-201ENST00000364239 121 ntBASIC1.66□□□□□ -2.14
AP4E1Q9UPM8 RNU6-910P-201ENST00000390844 107 ntBASIC1.66□□□□□ -2.14
AP4E1Q9UPM8 SNORD79.1-201ENST00000516069 84 ntBASIC1.66□□□□□ -2.14
AP4E1Q9UPM8 Y_RNA.676-201ENST00000516393 96 ntBASIC1.66□□□□□ -2.14
AP4E1Q9UPM8 AC138907.6-201ENST00000568401 126 ntBASIC1.66□□□□□ -2.14
AP4E1Q9UPM8 AC138869.1-201ENST00000568623 124 ntBASIC1.66□□□□□ -2.14
AP4E1Q9UPM8 MIR4696-201ENST00000581431 70 ntBASIC1.66□□□□□ -2.14
AP4E1Q9UPM8 RNU6-664P-201ENST00000362381 107 ntBASIC1.65□□□□□ -2.15
AP4E1Q9UPM8 Y_RNA.264-201ENST00000364665 102 ntBASIC1.65□□□□□ -2.15
AP4E1Q9UPM8 RNU6-1051P-201ENST00000365471 102 ntBASIC1.65□□□□□ -2.15
AP4E1Q9UPM8 SNORD101-201ENST00000384027 73 ntBASIC1.65□□□□□ -2.15
AP4E1Q9UPM8 SNORA80D-201ENST00000384488 135 ntBASIC1.65□□□□□ -2.15
AP4E1Q9UPM8 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.65□□□□□ -2.15
AP4E1Q9UPM8 AL603825.1-201ENST00000438481 80 ntBASIC1.65□□□□□ -2.15
AP4E1Q9UPM8 RNU7-102P-201ENST00000458948 62 ntBASIC1.65□□□□□ -2.15
AP4E1Q9UPM8 Y_RNA.239-201ENST00000364444 113 ntBASIC1.64□□□□□ -2.15
AP4E1Q9UPM8 RNA5SP190-201ENST00000365222 118 ntBASIC1.64□□□□□ -2.15
AP4E1Q9UPM8 RNU6-535P-201ENST00000384722 107 ntBASIC1.64□□□□□ -2.15
AP4E1Q9UPM8 MIR938-201ENST00000401216 83 ntBASIC1.64□□□□□ -2.15
AP4E1Q9UPM8 MIR4285-201ENST00000581001 85 ntBASIC1.64□□□□□ -2.15
AP4E1Q9UPM8 BX248123.2-201ENST00000606318 124 ntBASIC1.64□□□□□ -2.15
AP4E1Q9UPM8 AC027335.2-201ENST00000624030 375 ntBASIC1.64□□□□□ -2.15
AP4E1Q9UPM8 RNU6-364P-201ENST00000384387 107 ntBASIC1.63□□□□□ -2.15
AP4E1Q9UPM8 AC074348.1-201ENST00000426503 132 ntBASIC1.63□□□□□ -2.15
AP4E1Q9UPM8 snoU13.17-201ENST00000458802 104 ntBASIC1.63□□□□□ -2.15
AP4E1Q9UPM8 RNU7-90P-201ENST00000459216 62 ntBASIC1.63□□□□□ -2.15
AP4E1Q9UPM8 SNORD13-201ENST00000459299 104 ntBASIC1.63□□□□□ -2.15
AP4E1Q9UPM8 MIR4804-201ENST00000581683 73 ntBASIC1.63□□□□□ -2.15
AP4E1Q9UPM8 MIR4484-201ENST00000582855 83 ntBASIC1.63□□□□□ -2.15
AP4E1Q9UPM8 AC008608.1-201ENST00000603910 127 ntBASIC1.63□□□□□ -2.15
AP4E1Q9UPM8 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.63□□□□□ -2.15
AP4E1Q9UPM8 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.62□□□□□ -2.15
AP4E1Q9UPM8 RNU5F-1-201ENST00000362507 117 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 249.3 ms