Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 RNU6-449P-201ENST00000383914 107 ntBASIC0.04□□□□□ -2.4
SHROOM4Q9ULL8 SNORA42.1-201ENST00000363515 137 ntBASIC0.03□□□□□ -2.4
SHROOM4Q9ULL8 RNY1P11-201ENST00000363759 113 ntBASIC0.03□□□□□ -2.4
SHROOM4Q9ULL8 Y_RNA.257-201ENST00000364596 102 ntBASIC0.03□□□□□ -2.4
SHROOM4Q9ULL8 RNU6-865P-201ENST00000364772 107 ntBASIC0.03□□□□□ -2.4
SHROOM4Q9ULL8 RNU6-1104P-201ENST00000384723 104 ntBASIC0.03□□□□□ -2.4
SHROOM4Q9ULL8 Y_RNA.778-201ENST00000620203 90 ntBASIC0.03□□□□□ -2.4
SHROOM4Q9ULL8 RPL39P34-201ENST00000477141 156 ntBASIC0.03□□□□□ -2.41
SHROOM4Q9ULL8 AC141557.1-201ENST00000540982 400 ntBASIC0.03□□□□□ -2.41
SHROOM4Q9ULL8 MIR4645-201ENST00000583158 77 ntBASIC0.03□□□□□ -2.41
SHROOM4Q9ULL8 SNORD49B-201ENST00000365172 72 ntBASIC0.02□□□□□ -2.41
SHROOM4Q9ULL8 RNU6-652P-201ENST00000365488 107 ntBASIC0.02□□□□□ -2.41
SHROOM4Q9ULL8 AC108081.1-201ENST00000604358 221 ntBASIC0.02□□□□□ -2.41
SHROOM4Q9ULL8 AC104408.1-201ENST00000605241 170 ntBASIC0.02□□□□□ -2.41
SHROOM4Q9ULL8 MIR214-201ENST00000385214 110 ntBASIC0.01□□□□□ -2.41
SHROOM4Q9ULL8 Y_RNA.580-201ENST00000391004 95 ntBASIC0.01□□□□□ -2.41
SHROOM4Q9ULL8 BX276092.1-201ENST00000427368 251 ntBASIC0.01□□□□□ -2.41
SHROOM4Q9ULL8 RNU7-129P-201ENST00000516128 62 ntBASIC0.01□□□□□ -2.41
SHROOM4Q9ULL8 RNU7-161P-201ENST00000517289 62 ntBASIC0.01□□□□□ -2.41
SHROOM4Q9ULL8 MIR5706-201ENST00000579841 80 ntBASIC0.01□□□□□ -2.41
SHROOM4Q9ULL8 RNU6-1184P-201ENST00000384588 108 ntBASIC0□□□□□ -2.41
SHROOM4Q9ULL8 MIR892B-201ENST00000401279 77 ntBASIC0□□□□□ -2.41
SHROOM4Q9ULL8 SNX3P1X-201ENST00000414887 175 ntBASIC0□□□□□ -2.41
SHROOM4Q9ULL8 TRAJ51-201ENST00000504127 63 ntBASIC0□□□□□ -2.41
SHROOM4Q9ULL8 RNU7-6P-201ENST00000516845 62 ntBASIC0□□□□□ -2.41
SHROOM4Q9ULL8 RNU6-182P-201ENST00000516970 105 ntBASIC0□□□□□ -2.41
SHROOM4Q9ULL8 MIR548AX-201ENST00000580117 73 ntBASIC0□□□□□ -2.41
SHROOM4Q9ULL8 AC021753.1-201ENST00000635724 168 ntBASIC0□□□□□ -2.41
SHROOM4Q9ULL8 Y_RNA.127-201ENST00000363386 109 ntBASIC-0.01□□□□□ -2.41
SHROOM4Q9ULL8 RNU6-616P-201ENST00000384353 107 ntBASIC-0.01□□□□□ -2.41
SHROOM4Q9ULL8 U7.6-201ENST00000610841 64 ntBASIC-0.01□□□□□ -2.41
SHROOM4Q9ULL8 AL162376.1-201ENST00000624117 175 ntBASIC-0.01□□□□□ -2.41
SHROOM4Q9ULL8 RNU7-104P-201ENST00000459398 79 ntBASIC-0.02□□□□□ -2.41
SHROOM4Q9ULL8 Y_RNA.35-201ENST00000362601 101 ntBASIC-0.03□□□□□ -2.41
SHROOM4Q9ULL8 Y_RNA.221-201ENST00000364248 96 ntBASIC-0.03□□□□□ -2.41
SHROOM4Q9ULL8 MIR599-201ENST00000385069 95 ntBASIC-0.03□□□□□ -2.41
SHROOM4Q9ULL8 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.03□□□□□ -2.41
SHROOM4Q9ULL8 RNA5SP403-201ENST00000363598 108 ntBASIC-0.03□□□□□ -2.41
SHROOM4Q9ULL8 MIR4752-201ENST00000579672 72 ntBASIC-0.03□□□□□ -2.41
SHROOM4Q9ULL8 MIR499B-201ENST00000636498 73 ntBASIC-0.03□□□□□ -2.41
SHROOM4Q9ULL8 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.05□□□□□ -2.42
SHROOM4Q9ULL8 RNU6-394P-201ENST00000410735 107 ntBASIC-0.05□□□□□ -2.42
SHROOM4Q9ULL8 RNU7-197P-201ENST00000458836 62 ntBASIC-0.05□□□□□ -2.42
SHROOM4Q9ULL8 RNY1P9-201ENST00000532431 109 ntBASIC-0.05□□□□□ -2.42
SHROOM4Q9ULL8 RNU6-647P-201ENST00000364243 107 ntBASIC-0.06□□□□□ -2.42
SHROOM4Q9ULL8 RNU6-915P-201ENST00000364943 103 ntBASIC-0.06□□□□□ -2.42
SHROOM4Q9ULL8 MIR643-201ENST00000385267 97 ntBASIC-0.06□□□□□ -2.42
SHROOM4Q9ULL8 RNU6-127P-201ENST00000390897 107 ntBASIC-0.06□□□□□ -2.42
SHROOM4Q9ULL8 SNORD41.1-201ENST00000391000 69 ntBASIC-0.06□□□□□ -2.42
SHROOM4Q9ULL8 RNU6-460P-201ENST00000391158 108 ntBASIC-0.06□□□□□ -2.42
SHROOM4Q9ULL8 AC097635.1-201ENST00000450678 155 ntBASIC-0.06□□□□□ -2.42
SHROOM4Q9ULL8 MIR3163-201ENST00000581592 73 ntBASIC-0.06□□□□□ -2.42
SHROOM4Q9ULL8 MIR4743-201ENST00000584576 69 ntBASIC-0.06□□□□□ -2.42
SHROOM4Q9ULL8 AP001340.1-201ENST00000624405 217 ntBASIC-0.06□□□□□ -2.42
SHROOM4Q9ULL8 AC073869.9-201ENST00000641610 120 ntBASIC-0.06□□□□□ -2.42
SHROOM4Q9ULL8 SNORD114-28-201ENST00000363610 72 ntBASIC-0.07□□□□□ -2.42
SHROOM4Q9ULL8 AC074198.2-201ENST00000508153 258 ntBASIC-0.07□□□□□ -2.42
SHROOM4Q9ULL8 RN7SKP19-201ENST00000516016 252 ntBASIC-0.07□□□□□ -2.42
SHROOM4Q9ULL8 RNU6-782P-201ENST00000516852 104 ntBASIC-0.07□□□□□ -2.42
SHROOM4Q9ULL8 RNA5SP136-201ENST00000410906 107 ntBASIC-0.08□□□□□ -2.42
SHROOM4Q9ULL8 AP001328.1-201ENST00000528550 176 ntBASIC-0.08□□□□□ -2.42
SHROOM4Q9ULL8 SNORD38.2-201ENST00000384470 69 ntBASIC-0.09□□□□□ -2.42
SHROOM4Q9ULL8 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-0.09□□□□□ -2.42
SHROOM4Q9ULL8 MIR376B-201ENST00000614515 100 ntBASIC-0.09□□□□□ -2.42
SHROOM4Q9ULL8 AC087741.2-201ENST00000619415 172 ntBASIC-0.09□□□□□ -2.42
SHROOM4Q9ULL8 Y_RNA.114-201ENST00000363265 113 ntBASIC-0.1□□□□□ -2.42
SHROOM4Q9ULL8 RNU6-509P-201ENST00000363519 107 ntBASIC-0.1□□□□□ -2.42
SHROOM4Q9ULL8 Y_RNA.360-201ENST00000365512 102 ntBASIC-0.1□□□□□ -2.42
SHROOM4Q9ULL8 Y_RNA.213-201ENST00000364178 111 ntBASIC-0.1□□□□□ -2.43
SHROOM4Q9ULL8 RNU6-571P-201ENST00000384128 107 ntBASIC-0.1□□□□□ -2.43
SHROOM4Q9ULL8 MIR548X2-201ENST00000579776 100 ntBASIC-0.1□□□□□ -2.43
SHROOM4Q9ULL8 MIR4290-201ENST00000583807 95 ntBASIC-0.1□□□□□ -2.43
SHROOM4Q9ULL8 MIR1295B-201ENST00000636144 60 ntBASIC-0.1□□□□□ -2.43
SHROOM4Q9ULL8 RNA5SP451-201ENST00000410588 110 ntBASIC-0.11□□□□□ -2.43
SHROOM4Q9ULL8 SNORD63B-201ENST00000411005 70 ntBASIC-0.11□□□□□ -2.43
SHROOM4Q9ULL8 Y_RNA.809-201ENST00000516058 95 ntBASIC-0.11□□□□□ -2.43
SHROOM4Q9ULL8 RNU6-521P-201ENST00000516663 105 ntBASIC-0.11□□□□□ -2.43
SHROOM4Q9ULL8 RNU6-170P-201ENST00000362832 104 ntBASIC-0.12□□□□□ -2.43
SHROOM4Q9ULL8 SNORD114-5-201ENST00000362928 70 ntBASIC-0.12□□□□□ -2.43
SHROOM4Q9ULL8 MIR224-201ENST00000384889 81 ntBASIC-0.12□□□□□ -2.43
SHROOM4Q9ULL8 MIR519A1-201ENST00000385257 85 ntBASIC-0.12□□□□□ -2.43
SHROOM4Q9ULL8 RNU6-269P-201ENST00000391077 97 ntBASIC-0.12□□□□□ -2.43
SHROOM4Q9ULL8 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.12□□□□□ -2.43
SHROOM4Q9ULL8 Y_RNA.198-201ENST00000364013 98 ntBASIC-0.13□□□□□ -2.43
SHROOM4Q9ULL8 MIR593-201ENST00000384856 100 ntBASIC-0.13□□□□□ -2.43
SHROOM4Q9ULL8 MIR145-201ENST00000384967 88 ntBASIC-0.13□□□□□ -2.43
SHROOM4Q9ULL8 RNU7-74P-201ENST00000459104 62 ntBASIC-0.13□□□□□ -2.43
SHROOM4Q9ULL8 Y_RNA.8-201ENST00000362353 102 ntBASIC-0.14□□□□□ -2.43
SHROOM4Q9ULL8 RNU6-1130P-201ENST00000365434 107 ntBASIC-0.14□□□□□ -2.43
SHROOM4Q9ULL8 SNORD116-18-201ENST00000383961 92 ntBASIC-0.14□□□□□ -2.43
SHROOM4Q9ULL8 MTND5P40-201ENST00000559945 246 ntBASIC-0.14□□□□□ -2.43
SHROOM4Q9ULL8 RNU1-29P-201ENST00000606574 126 ntBASIC-0.14□□□□□ -2.43
SHROOM4Q9ULL8 IGKV1-22-201ENST00000524313 326 ntBASIC-0.15□□□□□ -2.43
SHROOM4Q9ULL8 SNORD115-19-201ENST00000363098 82 ntBASIC-0.16□□□□□ -2.43
SHROOM4Q9ULL8 SNORD115-18-201ENST00000363293 82 ntBASIC-0.16□□□□□ -2.43
SHROOM4Q9ULL8 SNORA32.1-201ENST00000364514 115 ntBASIC-0.16□□□□□ -2.43
SHROOM4Q9ULL8 SNORD115-17-201ENST00000364612 82 ntBASIC-0.16□□□□□ -2.43
SHROOM4Q9ULL8 Y_RNA.400-201ENST00000383963 111 ntBASIC-0.16□□□□□ -2.43
SHROOM4Q9ULL8 RNU6-1307P-201ENST00000391012 103 ntBASIC-0.16□□□□□ -2.43
SHROOM4Q9ULL8 AC108059.2-201ENST00000434626 151 ntBASIC-0.16□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 336.5 ms