Protein–RNA interactions for Protein: Q9ULD4

BRPF3, Bromodomain and PHD finger-containing protein 3, humanhuman

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3Q9ULD4 AL512598.1-201ENST00000610158 273 ntBASIC1.63□□□□□ -2.15
BRPF3Q9ULD4 AC092628.1-201ENST00000436250 252 ntBASIC1.62□□□□□ -2.15
BRPF3Q9ULD4 AL161932.1-201ENST00000437408 146 ntBASIC1.62□□□□□ -2.15
BRPF3Q9ULD4 Y_RNA.648-201ENST00000459455 110 ntBASIC1.62□□□□□ -2.15
BRPF3Q9ULD4 AL157834.3-201ENST00000615543 103 ntBASIC1.62□□□□□ -2.15
BRPF3Q9ULD4 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
BRPF3Q9ULD4 MIR19B1-201ENST00000384829 87 ntBASIC1.61□□□□□ -2.15
BRPF3Q9ULD4 RNU6-448P-201ENST00000517052 107 ntBASIC1.61□□□□□ -2.15
BRPF3Q9ULD4 MIR4769-201ENST00000584126 77 ntBASIC1.61□□□□□ -2.15
BRPF3Q9ULD4 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
BRPF3Q9ULD4 RNU1-124P-201ENST00000363861 145 ntBASIC1.6□□□□□ -2.15
BRPF3Q9ULD4 RNU6-535P-201ENST00000384722 107 ntBASIC1.6□□□□□ -2.15
BRPF3Q9ULD4 RNU7-195P-201ENST00000458793 62 ntBASIC1.6□□□□□ -2.15
BRPF3Q9ULD4 AP003327.1-201ENST00000529684 127 ntBASIC1.6□□□□□ -2.15
BRPF3Q9ULD4 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.6□□□□□ -2.15
BRPF3Q9ULD4 RMST_2.1-201ENST00000617263 136 ntBASIC1.6□□□□□ -2.15
BRPF3Q9ULD4 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
BRPF3Q9ULD4 Y_RNA.73-201ENST00000362910 113 ntBASIC1.59□□□□□ -2.15
BRPF3Q9ULD4 RNU6-291P-201ENST00000384720 107 ntBASIC1.59□□□□□ -2.15
BRPF3Q9ULD4 MIR519A1-201ENST00000385257 85 ntBASIC1.59□□□□□ -2.15
BRPF3Q9ULD4 snoU13.11-201ENST00000459219 104 ntBASIC1.59□□□□□ -2.15
BRPF3Q9ULD4 RNU7-95P-201ENST00000459222 64 ntBASIC1.59□□□□□ -2.15
BRPF3Q9ULD4 ZNF209P-201ENST00000593450 2304 ntBASIC1.58□□□□□ -2.16
BRPF3Q9ULD4 RNU6-633P-201ENST00000362612 103 ntBASIC1.58□□□□□ -2.16
BRPF3Q9ULD4 Y_RNA.191-201ENST00000363972 113 ntBASIC1.58□□□□□ -2.16
BRPF3Q9ULD4 FABP5P4-201ENST00000437203 171 ntBASIC1.58□□□□□ -2.16
BRPF3Q9ULD4 RNU7-85P-201ENST00000458851 63 ntBASIC1.58□□□□□ -2.16
BRPF3Q9ULD4 SNORD4B-201ENST00000459083 72 ntBASIC1.58□□□□□ -2.16
BRPF3Q9ULD4 AC022137.1-201ENST00000483735 151 ntBASIC1.58□□□□□ -2.16
BRPF3Q9ULD4 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.58□□□□□ -2.16
BRPF3Q9ULD4 AL359821.1-201ENST00000605519 182 ntBASIC1.58□□□□□ -2.16
BRPF3Q9ULD4 AL136317.1-201ENST00000612653 226 ntBASIC1.58□□□□□ -2.16
BRPF3Q9ULD4 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.58□□□□□ -2.16
BRPF3Q9ULD4 RNA5SP173-201ENST00000364857 136 ntBASIC1.57□□□□□ -2.16
BRPF3Q9ULD4 RNU6-1152P-201ENST00000384576 107 ntBASIC1.57□□□□□ -2.16
BRPF3Q9ULD4 MIR758-201ENST00000390227 88 ntBASIC1.57□□□□□ -2.16
BRPF3Q9ULD4 SNORD89-201ENST00000390981 114 ntBASIC1.57□□□□□ -2.16
BRPF3Q9ULD4 AC004223.1-201ENST00000479840 271 ntBASIC1.57□□□□□ -2.16
BRPF3Q9ULD4 Y_RNA.809-201ENST00000516058 95 ntBASIC1.57□□□□□ -2.16
BRPF3Q9ULD4 RNA5SP404-201ENST00000517118 132 ntBASIC1.57□□□□□ -2.16
BRPF3Q9ULD4 AC138907.6-201ENST00000568401 126 ntBASIC1.57□□□□□ -2.16
BRPF3Q9ULD4 AC138869.1-201ENST00000568623 124 ntBASIC1.57□□□□□ -2.16
BRPF3Q9ULD4 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.56□□□□□ -2.16
BRPF3Q9ULD4 RNU6-509P-201ENST00000363519 107 ntBASIC1.56□□□□□ -2.16
BRPF3Q9ULD4 MIR200A-201ENST00000384875 90 ntBASIC1.56□□□□□ -2.16
BRPF3Q9ULD4 RNU1-123P-201ENST00000458950 160 ntBASIC1.56□□□□□ -2.16
BRPF3Q9ULD4 SNORD124-201ENST00000459577 104 ntBASIC1.56□□□□□ -2.16
BRPF3Q9ULD4 RNU6-237P-201ENST00000515985 71 ntBASIC1.56□□□□□ -2.16
BRPF3Q9ULD4 RNU6-1110P-201ENST00000516462 101 ntBASIC1.56□□□□□ -2.16
BRPF3Q9ULD4 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.56□□□□□ -2.16
BRPF3Q9ULD4 RNA5SP245-201ENST00000364239 121 ntBASIC1.55□□□□□ -2.16
BRPF3Q9ULD4 MIR520H-201ENST00000385126 88 ntBASIC1.55□□□□□ -2.16
BRPF3Q9ULD4 RNU6-482P-201ENST00000391068 107 ntBASIC1.55□□□□□ -2.16
BRPF3Q9ULD4 RNU6-466P-201ENST00000391224 103 ntBASIC1.55□□□□□ -2.16
BRPF3Q9ULD4 MIR942-201ENST00000401111 86 ntBASIC1.55□□□□□ -2.16
BRPF3Q9ULD4 RNU6-592P-201ENST00000411333 103 ntBASIC1.55□□□□□ -2.16
BRPF3Q9ULD4 AP1B1P2-201ENST00000416196 106 ntBASIC1.55□□□□□ -2.16
BRPF3Q9ULD4 RNU6-1260P-201ENST00000362944 107 ntBASIC1.54□□□□□ -2.16
BRPF3Q9ULD4 Y_RNA.283-201ENST00000364798 112 ntBASIC1.54□□□□□ -2.16
BRPF3Q9ULD4 RNU6-497P-201ENST00000365316 104 ntBASIC1.54□□□□□ -2.16
BRPF3Q9ULD4 AC097635.1-201ENST00000450678 155 ntBASIC1.54□□□□□ -2.16
BRPF3Q9ULD4 U7.7-201ENST00000459276 60 ntBASIC1.54□□□□□ -2.16
BRPF3Q9ULD4 MIR4421-201ENST00000578133 69 ntBASIC1.54□□□□□ -2.16
BRPF3Q9ULD4 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
BRPF3Q9ULD4 Y_RNA.4-201ENST00000362333 112 ntBASIC1.53□□□□□ -2.16
BRPF3Q9ULD4 SNORD115-27-201ENST00000364430 82 ntBASIC1.53□□□□□ -2.16
BRPF3Q9ULD4 RNU6-573P-201ENST00000383938 106 ntBASIC1.53□□□□□ -2.16
BRPF3Q9ULD4 Y_RNA.611-201ENST00000410682 108 ntBASIC1.53□□□□□ -2.16
BRPF3Q9ULD4 RNU6-65P-201ENST00000516332 98 ntBASIC1.53□□□□□ -2.16
BRPF3Q9ULD4 MIR5588-201ENST00000581890 63 ntBASIC1.53□□□□□ -2.16
BRPF3Q9ULD4 MIR4536-1-201ENST00000583537 88 ntBASIC1.53□□□□□ -2.16
BRPF3Q9ULD4 MIR548BB-201ENST00000626714 66 ntBASIC1.53□□□□□ -2.16
BRPF3Q9ULD4 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.53□□□□□ -2.16
BRPF3Q9ULD4 RNU6-957P-201ENST00000363652 99 ntBASIC1.52□□□□□ -2.17
BRPF3Q9ULD4 RNU6-242P-201ENST00000384359 107 ntBASIC1.52□□□□□ -2.17
BRPF3Q9ULD4 MIR599-201ENST00000385069 95 ntBASIC1.52□□□□□ -2.17
BRPF3Q9ULD4 RNU1-92P-201ENST00000517017 135 ntBASIC1.52□□□□□ -2.17
BRPF3Q9ULD4 MIR3660-201ENST00000584845 100 ntBASIC1.52□□□□□ -2.17
BRPF3Q9ULD4 RNU6-979P-201ENST00000383896 107 ntBASIC1.51□□□□□ -2.17
BRPF3Q9ULD4 MIR519C-201ENST00000385053 87 ntBASIC1.51□□□□□ -2.17
BRPF3Q9ULD4 SNORD105-201ENST00000386910 85 ntBASIC1.51□□□□□ -2.17
BRPF3Q9ULD4 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
BRPF3Q9ULD4 Y_RNA.32-201ENST00000362589 110 ntBASIC1.5□□□□□ -2.17
BRPF3Q9ULD4 RNU4-32P-201ENST00000363404 141 ntBASIC1.5□□□□□ -2.17
BRPF3Q9ULD4 SNORD114-24-201ENST00000365029 72 ntBASIC1.5□□□□□ -2.17
BRPF3Q9ULD4 SNORA40.6-201ENST00000391153 128 ntBASIC1.5□□□□□ -2.17
BRPF3Q9ULD4 MIR1285-1-201ENST00000408593 84 ntBASIC1.5□□□□□ -2.17
BRPF3Q9ULD4 MIR4661-201ENST00000582720 75 ntBASIC1.5□□□□□ -2.17
BRPF3Q9ULD4 uc_338.16-201ENST00000621804 95 ntBASIC1.5□□□□□ -2.17
BRPF3Q9ULD4 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.5□□□□□ -2.17
BRPF3Q9ULD4 SNORA7.1-201ENST00000363750 139 ntBASIC1.49□□□□□ -2.17
BRPF3Q9ULD4 RNU6-1276P-201ENST00000365372 104 ntBASIC1.49□□□□□ -2.17
BRPF3Q9ULD4 RNU6-524P-201ENST00000384270 107 ntBASIC1.49□□□□□ -2.17
BRPF3Q9ULD4 RNU6-75P-201ENST00000515944 104 ntBASIC1.49□□□□□ -2.17
BRPF3Q9ULD4 SNORA31.14-201ENST00000516728 116 ntBASIC1.49□□□□□ -2.17
BRPF3Q9ULD4 Y_RNA.174-201ENST00000363781 105 ntBASIC1.48□□□□□ -2.17
BRPF3Q9ULD4 Y_RNA.426-201ENST00000384068 113 ntBASIC1.48□□□□□ -2.17
BRPF3Q9ULD4 MIR1236-201ENST00000408340 102 ntBASIC1.48□□□□□ -2.17
BRPF3Q9ULD4 AC244505.6-201ENST00000452829 130 ntBASIC1.48□□□□□ -2.17
BRPF3Q9ULD4 RNA5SP458-201ENST00000516188 119 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 361.8 ms