Protein–RNA interactions for Protein: Q9UKN8

GTF3C4, General transcription factor 3C polypeptide 4, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4Q9UKN8 RNU7-195P-201ENST00000458793 62 ntBASIC0.38□□□□□ -2.35
GTF3C4Q9UKN8 RNU7-161P-201ENST00000517289 62 ntBASIC0.38□□□□□ -2.35
GTF3C4Q9UKN8 AC007012.1-201ENST00000567192 175 ntBASIC0.38□□□□□ -2.35
GTF3C4Q9UKN8 MIRLET7D-201ENST00000362263 87 ntBASIC0.37□□□□□ -2.35
GTF3C4Q9UKN8 Y_RNA.221-201ENST00000364248 96 ntBASIC0.37□□□□□ -2.35
GTF3C4Q9UKN8 RNU6-81P-201ENST00000365608 104 ntBASIC0.37□□□□□ -2.35
GTF3C4Q9UKN8 AC069271.1-201ENST00000445577 156 ntBASIC0.37□□□□□ -2.35
GTF3C4Q9UKN8 RNA5SP134-201ENST00000516492 96 ntBASIC0.37□□□□□ -2.35
GTF3C4Q9UKN8 RNA5SP47-201ENST00000517230 109 ntBASIC0.37□□□□□ -2.35
GTF3C4Q9UKN8 MIR924-201ENST00000638017 53 ntBASIC0.37□□□□□ -2.35
GTF3C4Q9UKN8 Y_RNA.56-201ENST00000362798 112 ntBASIC0.36□□□□□ -2.35
GTF3C4Q9UKN8 SNORD115-24-201ENST00000363528 82 ntBASIC0.36□□□□□ -2.35
GTF3C4Q9UKN8 Y_RNA.155-201ENST00000363632 101 ntBASIC0.36□□□□□ -2.35
GTF3C4Q9UKN8 RNU6-716P-201ENST00000365621 103 ntBASIC0.36□□□□□ -2.35
GTF3C4Q9UKN8 MIR516A2-201ENST00000384888 90 ntBASIC0.36□□□□□ -2.35
GTF3C4Q9UKN8 MIR516A1-201ENST00000385033 90 ntBASIC0.36□□□□□ -2.35
GTF3C4Q9UKN8 SNORD63B-201ENST00000411005 70 ntBASIC0.36□□□□□ -2.35
GTF3C4Q9UKN8 AL161932.1-201ENST00000437408 146 ntBASIC0.36□□□□□ -2.35
GTF3C4Q9UKN8 SNRPGP12-201ENST00000449481 213 ntBASIC0.36□□□□□ -2.35
GTF3C4Q9UKN8 RNU6-850P-201ENST00000516934 103 ntBASIC0.36□□□□□ -2.35
GTF3C4Q9UKN8 RNU6-1313P-201ENST00000362622 102 ntBASIC0.35□□□□□ -2.35
GTF3C4Q9UKN8 SNORD118-201ENST00000363593 134 ntBASIC0.35□□□□□ -2.35
GTF3C4Q9UKN8 Y_RNA.346-201ENST00000365385 112 ntBASIC0.35□□□□□ -2.35
GTF3C4Q9UKN8 RNU6-1201P-201ENST00000384227 107 ntBASIC0.35□□□□□ -2.35
GTF3C4Q9UKN8 MIR518A1-201ENST00000385068 85 ntBASIC0.35□□□□□ -2.35
GTF3C4Q9UKN8 MIR577-201ENST00000385196 96 ntBASIC0.35□□□□□ -2.35
GTF3C4Q9UKN8 SNORA19.1-201ENST00000410656 129 ntBASIC0.35□□□□□ -2.35
GTF3C4Q9UKN8 RNA5SP268-201ENST00000516828 124 ntBASIC0.35□□□□□ -2.35
GTF3C4Q9UKN8 MIR548Z-201ENST00000584743 97 ntBASIC0.35□□□□□ -2.35
GTF3C4Q9UKN8 AL162726.3-218ENST00000636401 95 ntBASIC0.35□□□□□ -2.35
GTF3C4Q9UKN8 AL512310.12-203ENST00000640543 90 ntBASIC0.35□□□□□ -2.35
GTF3C4Q9UKN8 AC091304.10-201ENST00000641554 121 ntBASIC0.35□□□□□ -2.35
GTF3C4Q9UKN8 Y_RNA.35-201ENST00000362601 101 ntBASIC0.34□□□□□ -2.36
GTF3C4Q9UKN8 SNORD44.1-201ENST00000363202 61 ntBASIC0.34□□□□□ -2.36
GTF3C4Q9UKN8 RNY4P6-201ENST00000363667 96 ntBASIC0.34□□□□□ -2.36
GTF3C4Q9UKN8 TMSB4XP3-201ENST00000445144 114 ntBASIC0.34□□□□□ -2.36
GTF3C4Q9UKN8 AC244505.6-201ENST00000452829 130 ntBASIC0.34□□□□□ -2.36
GTF3C4Q9UKN8 RNU6-1232P-201ENST00000516299 86 ntBASIC0.34□□□□□ -2.36
GTF3C4Q9UKN8 RNU1-29P-201ENST00000606574 126 ntBASIC0.34□□□□□ -2.36
GTF3C4Q9UKN8 MIR6755-201ENST00000619993 66 ntBASIC0.34□□□□□ -2.36
GTF3C4Q9UKN8 Y_RNA.85-201ENST00000363014 111 ntBASIC0.33□□□□□ -2.36
GTF3C4Q9UKN8 Y_RNA.174-201ENST00000363781 105 ntBASIC0.33□□□□□ -2.36
GTF3C4Q9UKN8 U8.6-201ENST00000364939 135 ntBASIC0.33□□□□□ -2.36
GTF3C4Q9UKN8 RNU6-409P-201ENST00000384114 104 ntBASIC0.33□□□□□ -2.36
GTF3C4Q9UKN8 MIR599-201ENST00000385069 95 ntBASIC0.33□□□□□ -2.36
GTF3C4Q9UKN8 MIR548A3-201ENST00000385297 97 ntBASIC0.33□□□□□ -2.36
GTF3C4Q9UKN8 AL603908.1-201ENST00000406098 201 ntBASIC0.33□□□□□ -2.36
GTF3C4Q9UKN8 SNORA40.8-201ENST00000411034 126 ntBASIC0.33□□□□□ -2.36
GTF3C4Q9UKN8 RNU7-104P-201ENST00000459398 79 ntBASIC0.33□□□□□ -2.36
GTF3C4Q9UKN8 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.33□□□□□ -2.36
GTF3C4Q9UKN8 RNU6-469P-201ENST00000516253 101 ntBASIC0.33□□□□□ -2.36
GTF3C4Q9UKN8 SCARNA16.5-201ENST00000517114 183 ntBASIC0.33□□□□□ -2.36
GTF3C4Q9UKN8 MIR6129-201ENST00000616087 109 ntBASIC0.33□□□□□ -2.36
GTF3C4Q9UKN8 MIR6828-201ENST00000636181 60 ntBASIC0.33□□□□□ -2.36
GTF3C4Q9UKN8 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC0.33□□□□□ -2.36
GTF3C4Q9UKN8 MIR330-201ENST00000362196 94 ntBASIC0.32□□□□□ -2.36
GTF3C4Q9UKN8 MIR635-201ENST00000384830 98 ntBASIC0.32□□□□□ -2.36
GTF3C4Q9UKN8 SNORD71-201ENST00000411292 86 ntBASIC0.32□□□□□ -2.36
GTF3C4Q9UKN8 SPINT5P-201ENST00000448174 155 ntBASIC0.32□□□□□ -2.36
GTF3C4Q9UKN8 AC068339.1-201ENST00000526965 141 ntBASIC0.32□□□□□ -2.36
GTF3C4Q9UKN8 MIR4639-201ENST00000584938 69 ntBASIC0.32□□□□□ -2.36
GTF3C4Q9UKN8 MIR8087-201ENST00000612745 78 ntBASIC0.32□□□□□ -2.36
GTF3C4Q9UKN8 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
GTF3C4Q9UKN8 RNA5SP403-201ENST00000363598 108 ntBASIC0.31□□□□□ -2.36
GTF3C4Q9UKN8 RNU6-1163P-201ENST00000364516 107 ntBASIC0.31□□□□□ -2.36
GTF3C4Q9UKN8 RNU6-726P-201ENST00000364680 107 ntBASIC0.31□□□□□ -2.36
GTF3C4Q9UKN8 RNU6-22P-201ENST00000384355 107 ntBASIC0.31□□□□□ -2.36
GTF3C4Q9UKN8 RNU6-863P-201ENST00000515989 104 ntBASIC0.31□□□□□ -2.36
GTF3C4Q9UKN8 RNA5SP227-201ENST00000516184 113 ntBASIC0.31□□□□□ -2.36
GTF3C4Q9UKN8 MTND5P40-201ENST00000559945 246 ntBASIC0.31□□□□□ -2.36
GTF3C4Q9UKN8 AC138869.1-201ENST00000568623 124 ntBASIC0.31□□□□□ -2.36
GTF3C4Q9UKN8 MIR548H5-201ENST00000580314 60 ntBASIC0.31□□□□□ -2.36
GTF3C4Q9UKN8 RNU6-170P-201ENST00000362832 104 ntBASIC0.3□□□□□ -2.36
GTF3C4Q9UKN8 RNA5SP457-201ENST00000363657 124 ntBASIC0.3□□□□□ -2.36
GTF3C4Q9UKN8 RNU6-1327P-201ENST00000365302 105 ntBASIC0.3□□□□□ -2.36
GTF3C4Q9UKN8 RNU6-815P-201ENST00000384080 113 ntBASIC0.3□□□□□ -2.36
GTF3C4Q9UKN8 RNU6-524P-201ENST00000384270 107 ntBASIC0.3□□□□□ -2.36
GTF3C4Q9UKN8 MIR548G-201ENST00000408442 89 ntBASIC0.3□□□□□ -2.36
GTF3C4Q9UKN8 AL670379.3-201ENST00000605040 251 ntBASIC0.3□□□□□ -2.36
GTF3C4Q9UKN8 AL442128.1-201ENST00000615151 90 ntBASIC0.3□□□□□ -2.36
GTF3C4Q9UKN8 Y_RNA.173-201ENST00000363776 113 ntBASIC0.29□□□□□ -2.36
GTF3C4Q9UKN8 Y_RNA.423-201ENST00000384057 113 ntBASIC0.29□□□□□ -2.36
GTF3C4Q9UKN8 RNU6-571P-201ENST00000384128 107 ntBASIC0.29□□□□□ -2.36
GTF3C4Q9UKN8 Y_RNA.507-201ENST00000384500 99 ntBASIC0.29□□□□□ -2.36
GTF3C4Q9UKN8 SNORD116-21-201ENST00000384507 92 ntBASIC0.29□□□□□ -2.36
GTF3C4Q9UKN8 Y_RNA.563-201ENST00000384707 108 ntBASIC0.29□□□□□ -2.36
GTF3C4Q9UKN8 SNORA19-201ENST00000384737 128 ntBASIC0.29□□□□□ -2.36
GTF3C4Q9UKN8 RNU6-1168P-201ENST00000390831 104 ntBASIC0.29□□□□□ -2.36
GTF3C4Q9UKN8 AL606753.1-201ENST00000427435 87 ntBASIC0.29□□□□□ -2.36
GTF3C4Q9UKN8 AC109327.2-201ENST00000448339 378 ntBASIC0.29□□□□□ -2.36
GTF3C4Q9UKN8 RPL39P34-201ENST00000477141 156 ntBASIC0.29□□□□□ -2.36
GTF3C4Q9UKN8 Y_RNA.809-201ENST00000516058 95 ntBASIC0.29□□□□□ -2.36
GTF3C4Q9UKN8 SNORA62.5-201ENST00000516634 120 ntBASIC0.29□□□□□ -2.36
GTF3C4Q9UKN8 RNA5SP330-201ENST00000517096 96 ntBASIC0.29□□□□□ -2.36
GTF3C4Q9UKN8 MIR4679-2-201ENST00000578358 77 ntBASIC0.29□□□□□ -2.36
GTF3C4Q9UKN8 SNORA70.25-201ENST00000612741 95 ntBASIC0.29□□□□□ -2.36
GTF3C4Q9UKN8 U6.95-201ENST00000636931 70 ntBASIC0.29□□□□□ -2.36
GTF3C4Q9UKN8 AC132825.6-201ENST00000638861 357 ntBASIC0.29□□□□□ -2.36
GTF3C4Q9UKN8 SNORD36A-201ENST00000362874 73 ntBASIC0.28□□□□□ -2.36
GTF3C4Q9UKN8 Y_RNA.115-201ENST00000363272 98 ntBASIC0.28□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 196.7 ms