Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 MIR4421-201ENST00000578133 69 ntBASIC1.31□□□□□ -2.2
CDC42EP3Q9UKI2 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
CDC42EP3Q9UKI2 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
CDC42EP3Q9UKI2 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
CDC42EP3Q9UKI2 SNORD26-201ENST00000384147 75 ntBASIC1.3□□□□□ -2.2
CDC42EP3Q9UKI2 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
CDC42EP3Q9UKI2 MIR938-201ENST00000401216 83 ntBASIC1.3□□□□□ -2.2
CDC42EP3Q9UKI2 MIR4804-201ENST00000581683 73 ntBASIC1.3□□□□□ -2.2
CDC42EP3Q9UKI2 MIR6078-201ENST00000611069 100 ntBASIC1.3□□□□□ -2.2
CDC42EP3Q9UKI2 AC027335.2-201ENST00000624030 375 ntBASIC1.3□□□□□ -2.2
CDC42EP3Q9UKI2 Y_RNA.540-201ENST00000384638 111 ntBASIC1.29□□□□□ -2.2
CDC42EP3Q9UKI2 MIR19B1-201ENST00000384829 87 ntBASIC1.29□□□□□ -2.2
CDC42EP3Q9UKI2 MIR516A2-201ENST00000384888 90 ntBASIC1.29□□□□□ -2.2
CDC42EP3Q9UKI2 MIR516A1-201ENST00000385033 90 ntBASIC1.29□□□□□ -2.2
CDC42EP3Q9UKI2 RNU6-1254P-201ENST00000391266 104 ntBASIC1.29□□□□□ -2.2
CDC42EP3Q9UKI2 MIR1827-201ENST00000408549 66 ntBASIC1.29□□□□□ -2.2
CDC42EP3Q9UKI2 Y_RNA.609-201ENST00000410669 89 ntBASIC1.29□□□□□ -2.2
CDC42EP3Q9UKI2 RNU7-56P-201ENST00000458744 62 ntBASIC1.29□□□□□ -2.2
CDC42EP3Q9UKI2 Y_RNA.648-201ENST00000459455 110 ntBASIC1.29□□□□□ -2.2
CDC42EP3Q9UKI2 RNU7-106P-201ENST00000459514 67 ntBASIC1.29□□□□□ -2.2
CDC42EP3Q9UKI2 RNU6-267P-201ENST00000516714 103 ntBASIC1.29□□□□□ -2.2
CDC42EP3Q9UKI2 MIR548H5-201ENST00000580314 60 ntBASIC1.29□□□□□ -2.2
CDC42EP3Q9UKI2 RNU7-10P-201ENST00000607194 63 ntBASIC1.29□□□□□ -2.2
CDC42EP3Q9UKI2 IGLL4P-201ENST00000614590 133 ntBASIC1.29□□□□□ -2.2
CDC42EP3Q9UKI2 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
CDC42EP3Q9UKI2 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
CDC42EP3Q9UKI2 MIR494-201ENST00000349529 81 ntBASIC1.28□□□□□ -2.2
CDC42EP3Q9UKI2 MIR101-2-201ENST00000362195 79 ntBASIC1.28□□□□□ -2.2
CDC42EP3Q9UKI2 RNU6-633P-201ENST00000362612 103 ntBASIC1.28□□□□□ -2.2
CDC42EP3Q9UKI2 RNY1P1-201ENST00000364372 112 ntBASIC1.28□□□□□ -2.2
CDC42EP3Q9UKI2 RNY1P4-201ENST00000384595 115 ntBASIC1.28□□□□□ -2.2
CDC42EP3Q9UKI2 RNU6-994P-201ENST00000410507 111 ntBASIC1.28□□□□□ -2.2
CDC42EP3Q9UKI2 SNORD63B-201ENST00000411005 70 ntBASIC1.28□□□□□ -2.2
CDC42EP3Q9UKI2 AL353770.2-201ENST00000620024 78 ntBASIC1.28□□□□□ -2.2
CDC42EP3Q9UKI2 MIR1-1-201ENST00000362147 71 ntBASIC1.27□□□□□ -2.21
CDC42EP3Q9UKI2 SNORD114-26-201ENST00000363543 72 ntBASIC1.27□□□□□ -2.21
CDC42EP3Q9UKI2 SNORD114-22-201ENST00000365423 72 ntBASIC1.27□□□□□ -2.21
CDC42EP3Q9UKI2 Y_RNA.536-201ENST00000384621 113 ntBASIC1.27□□□□□ -2.21
CDC42EP3Q9UKI2 MIR635-201ENST00000384830 98 ntBASIC1.27□□□□□ -2.21
CDC42EP3Q9UKI2 SNORD4B-201ENST00000459083 72 ntBASIC1.27□□□□□ -2.21
CDC42EP3Q9UKI2 TRAJ51-201ENST00000504127 63 ntBASIC1.27□□□□□ -2.21
CDC42EP3Q9UKI2 snoMBII-202.2-201ENST00000517263 86 ntBASIC1.27□□□□□ -2.21
CDC42EP3Q9UKI2 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.27□□□□□ -2.21
CDC42EP3Q9UKI2 MIR6515-201ENST00000619843 57 ntBASIC1.27□□□□□ -2.21
CDC42EP3Q9UKI2 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
CDC42EP3Q9UKI2 RNU6-364P-201ENST00000384387 107 ntBASIC1.26□□□□□ -2.21
CDC42EP3Q9UKI2 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.26□□□□□ -2.21
CDC42EP3Q9UKI2 AC092628.1-201ENST00000436250 252 ntBASIC1.26□□□□□ -2.21
CDC42EP3Q9UKI2 RPS29P23-201ENST00000458635 123 ntBASIC1.26□□□□□ -2.21
CDC42EP3Q9UKI2 RNU7-102P-201ENST00000458948 62 ntBASIC1.26□□□□□ -2.21
CDC42EP3Q9UKI2 RNU6-448P-201ENST00000517052 107 ntBASIC1.26□□□□□ -2.21
CDC42EP3Q9UKI2 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.26□□□□□ -2.21
CDC42EP3Q9UKI2 AP003327.1-201ENST00000529684 127 ntBASIC1.26□□□□□ -2.21
CDC42EP3Q9UKI2 RNU6-509P-201ENST00000363519 107 ntBASIC1.25□□□□□ -2.21
CDC42EP3Q9UKI2 RNA5SP173-201ENST00000364857 136 ntBASIC1.25□□□□□ -2.21
CDC42EP3Q9UKI2 RNU6-979P-201ENST00000383896 107 ntBASIC1.25□□□□□ -2.21
CDC42EP3Q9UKI2 MIR222-201ENST00000384992 110 ntBASIC1.25□□□□□ -2.21
CDC42EP3Q9UKI2 MIR100-201ENST00000385259 80 ntBASIC1.25□□□□□ -2.21
CDC42EP3Q9UKI2 RNU6-592P-201ENST00000411333 103 ntBASIC1.25□□□□□ -2.21
CDC42EP3Q9UKI2 RNU7-85P-201ENST00000458851 63 ntBASIC1.25□□□□□ -2.21
CDC42EP3Q9UKI2 RNU6-977P-201ENST00000516411 103 ntBASIC1.25□□□□□ -2.21
CDC42EP3Q9UKI2 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.25□□□□□ -2.21
CDC42EP3Q9UKI2 AC008608.1-201ENST00000603910 127 ntBASIC1.25□□□□□ -2.21
CDC42EP3Q9UKI2 RNA5SP325-201ENST00000363756 130 ntBASIC1.24□□□□□ -2.21
CDC42EP3Q9UKI2 RNU6-243P-201ENST00000391140 107 ntBASIC1.24□□□□□ -2.21
CDC42EP3Q9UKI2 RNU6-519P-201ENST00000410590 108 ntBASIC1.24□□□□□ -2.21
CDC42EP3Q9UKI2 AC022137.1-201ENST00000483735 151 ntBASIC1.24□□□□□ -2.21
CDC42EP3Q9UKI2 Y_RNA.697-201ENST00000516776 113 ntBASIC1.24□□□□□ -2.21
CDC42EP3Q9UKI2 MIR5588-201ENST00000581890 63 ntBASIC1.24□□□□□ -2.21
CDC42EP3Q9UKI2 MIR7974-201ENST00000615835 79 ntBASIC1.24□□□□□ -2.21
CDC42EP3Q9UKI2 MIR6779-201ENST00000617283 64 ntBASIC1.24□□□□□ -2.21
CDC42EP3Q9UKI2 Y_RNA.36-201ENST00000362602 112 ntBASIC1.23□□□□□ -2.21
CDC42EP3Q9UKI2 Y_RNA.73-201ENST00000362910 113 ntBASIC1.23□□□□□ -2.21
CDC42EP3Q9UKI2 RNU6-1260P-201ENST00000362944 107 ntBASIC1.23□□□□□ -2.21
CDC42EP3Q9UKI2 RNU6-291P-201ENST00000384720 107 ntBASIC1.23□□□□□ -2.21
CDC42EP3Q9UKI2 AC067940.1-201ENST00000458411 300 ntBASIC1.23□□□□□ -2.21
CDC42EP3Q9UKI2 RNU6-1110P-201ENST00000516462 101 ntBASIC1.23□□□□□ -2.21
CDC42EP3Q9UKI2 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.23□□□□□ -2.21
CDC42EP3Q9UKI2 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
CDC42EP3Q9UKI2 RNU6-573P-201ENST00000383938 106 ntBASIC1.22□□□□□ -2.21
CDC42EP3Q9UKI2 MIR320A-201ENST00000385302 82 ntBASIC1.22□□□□□ -2.21
CDC42EP3Q9UKI2 RNU1-119P-201ENST00000391122 165 ntBASIC1.22□□□□□ -2.21
CDC42EP3Q9UKI2 RNU7-195P-201ENST00000458793 62 ntBASIC1.22□□□□□ -2.21
CDC42EP3Q9UKI2 snoU13.11-201ENST00000459219 104 ntBASIC1.22□□□□□ -2.21
CDC42EP3Q9UKI2 AC023790.1-201ENST00000482174 347 ntBASIC1.22□□□□□ -2.21
CDC42EP3Q9UKI2 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.22□□□□□ -2.21
CDC42EP3Q9UKI2 AC138907.6-201ENST00000568401 126 ntBASIC1.22□□□□□ -2.21
CDC42EP3Q9UKI2 AC138869.1-201ENST00000568623 124 ntBASIC1.22□□□□□ -2.21
CDC42EP3Q9UKI2 SNORD115-27-201ENST00000364430 82 ntBASIC1.21□□□□□ -2.22
CDC42EP3Q9UKI2 MIR520F-201ENST00000384824 87 ntBASIC1.21□□□□□ -2.22
CDC42EP3Q9UKI2 AC097635.1-201ENST00000450678 155 ntBASIC1.21□□□□□ -2.22
CDC42EP3Q9UKI2 U7.7-201ENST00000459276 60 ntBASIC1.21□□□□□ -2.22
CDC42EP3Q9UKI2 RNU7-171P-201ENST00000459581 62 ntBASIC1.21□□□□□ -2.22
CDC42EP3Q9UKI2 RNU6-75P-201ENST00000515944 104 ntBASIC1.21□□□□□ -2.22
CDC42EP3Q9UKI2 MIR548BB-201ENST00000626714 66 ntBASIC1.21□□□□□ -2.22
CDC42EP3Q9UKI2 RNU1-124P-201ENST00000363861 145 ntBASIC1.2□□□□□ -2.22
CDC42EP3Q9UKI2 Y_RNA.283-201ENST00000364798 112 ntBASIC1.2□□□□□ -2.22
CDC42EP3Q9UKI2 RNU6-535P-201ENST00000384722 107 ntBASIC1.2□□□□□ -2.22
CDC42EP3Q9UKI2 MIR200A-201ENST00000384875 90 ntBASIC1.2□□□□□ -2.22
CDC42EP3Q9UKI2 MIR1323-201ENST00000408090 73 ntBASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 175.3 ms