Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 RNU6-267P-201ENST00000516714 103 ntBASIC1.82□□□□□ -2.12
CXXC1Q9P0U4 SNORD53B-201ENST00000577887 78 ntBASIC1.82□□□□□ -2.12
CXXC1Q9P0U4 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.82□□□□□ -2.12
CXXC1Q9P0U4 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.82□□□□□ -2.12
CXXC1Q9P0U4 Y_RNA.73-201ENST00000362910 113 ntBASIC1.81□□□□□ -2.12
CXXC1Q9P0U4 MIR516A2-201ENST00000384888 90 ntBASIC1.81□□□□□ -2.12
CXXC1Q9P0U4 MIR516A1-201ENST00000385033 90 ntBASIC1.81□□□□□ -2.12
CXXC1Q9P0U4 RNU6-977P-201ENST00000516411 103 ntBASIC1.81□□□□□ -2.12
CXXC1Q9P0U4 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.81□□□□□ -2.12
CXXC1Q9P0U4 Y_RNA.56-201ENST00000362798 112 ntBASIC1.8□□□□□ -2.12
CXXC1Q9P0U4 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
CXXC1Q9P0U4 MIR100-201ENST00000385259 80 ntBASIC1.8□□□□□ -2.12
CXXC1Q9P0U4 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.8□□□□□ -2.12
CXXC1Q9P0U4 SNORD63B-201ENST00000411005 70 ntBASIC1.8□□□□□ -2.12
CXXC1Q9P0U4 Y_RNA.648-201ENST00000459455 110 ntBASIC1.8□□□□□ -2.12
CXXC1Q9P0U4 Y_RNA.697-201ENST00000516776 113 ntBASIC1.8□□□□□ -2.12
CXXC1Q9P0U4 RNA5SP364-201ENST00000516938 78 ntBASIC1.8□□□□□ -2.12
CXXC1Q9P0U4 MIR1-1-201ENST00000362147 71 ntBASIC1.79□□□□□ -2.12
CXXC1Q9P0U4 RNU6-633P-201ENST00000362612 103 ntBASIC1.79□□□□□ -2.12
CXXC1Q9P0U4 Y_RNA.42-201ENST00000362660 108 ntBASIC1.79□□□□□ -2.12
CXXC1Q9P0U4 RNU6-509P-201ENST00000363519 107 ntBASIC1.79□□□□□ -2.12
CXXC1Q9P0U4 Y_RNA.536-201ENST00000384621 113 ntBASIC1.79□□□□□ -2.12
CXXC1Q9P0U4 MIR4419B-201ENST00000577260 68 ntBASIC1.79□□□□□ -2.12
CXXC1Q9P0U4 AC027335.2-201ENST00000624030 375 ntBASIC1.79□□□□□ -2.12
CXXC1Q9P0U4 RNU6-497P-201ENST00000365316 104 ntBASIC1.78□□□□□ -2.12
CXXC1Q9P0U4 SNORA25-201ENST00000384384 134 ntBASIC1.78□□□□□ -2.12
CXXC1Q9P0U4 RNU6-592P-201ENST00000411333 103 ntBASIC1.78□□□□□ -2.12
CXXC1Q9P0U4 SNORD92-201ENST00000585078 85 ntBASIC1.78□□□□□ -2.12
CXXC1Q9P0U4 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.78□□□□□ -2.13
CXXC1Q9P0U4 RNU6-573P-201ENST00000383938 106 ntBASIC1.77□□□□□ -2.13
CXXC1Q9P0U4 Y_RNA.426-201ENST00000384068 113 ntBASIC1.77□□□□□ -2.13
CXXC1Q9P0U4 Y_RNA.611-201ENST00000410682 108 ntBASIC1.77□□□□□ -2.13
CXXC1Q9P0U4 MIR4421-201ENST00000578133 69 ntBASIC1.77□□□□□ -2.13
CXXC1Q9P0U4 MIR5588-201ENST00000581890 63 ntBASIC1.77□□□□□ -2.13
CXXC1Q9P0U4 AL157834.3-201ENST00000615543 103 ntBASIC1.77□□□□□ -2.13
CXXC1Q9P0U4 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
CXXC1Q9P0U4 SNORD36A-201ENST00000362874 73 ntBASIC1.76□□□□□ -2.13
CXXC1Q9P0U4 Y_RNA.219-201ENST00000364232 113 ntBASIC1.76□□□□□ -2.13
CXXC1Q9P0U4 RNU6-1276P-201ENST00000365372 104 ntBASIC1.76□□□□□ -2.13
CXXC1Q9P0U4 RNU1-119P-201ENST00000391122 165 ntBASIC1.76□□□□□ -2.13
CXXC1Q9P0U4 RNU6-466P-201ENST00000391224 103 ntBASIC1.76□□□□□ -2.13
CXXC1Q9P0U4 AC012493.3-201ENST00000604494 112 ntBASIC1.76□□□□□ -2.13
CXXC1Q9P0U4 MIR1245B-201ENST00000636115 69 ntBASIC1.76□□□□□ -2.13
CXXC1Q9P0U4 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
CXXC1Q9P0U4 MIR519C-201ENST00000385053 87 ntBASIC1.75□□□□□ -2.13
CXXC1Q9P0U4 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
CXXC1Q9P0U4 AC002429.1-201ENST00000437672 148 ntBASIC1.75□□□□□ -2.13
CXXC1Q9P0U4 MIR4804-201ENST00000581683 73 ntBASIC1.75□□□□□ -2.13
CXXC1Q9P0U4 MIR548BB-201ENST00000626714 66 ntBASIC1.75□□□□□ -2.13
CXXC1Q9P0U4 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
CXXC1Q9P0U4 RNA5SP327-201ENST00000362494 101 ntBASIC1.74□□□□□ -2.13
CXXC1Q9P0U4 SNORD115-37-201ENST00000363768 82 ntBASIC1.74□□□□□ -2.13
CXXC1Q9P0U4 RNU6-979P-201ENST00000383896 107 ntBASIC1.74□□□□□ -2.13
CXXC1Q9P0U4 MIR598-201ENST00000384868 97 ntBASIC1.74□□□□□ -2.13
CXXC1Q9P0U4 SUMO2P12-201ENST00000405924 140 ntBASIC1.74□□□□□ -2.13
CXXC1Q9P0U4 RNU7-102P-201ENST00000458948 62 ntBASIC1.74□□□□□ -2.13
CXXC1Q9P0U4 SNORD4B-201ENST00000459083 72 ntBASIC1.74□□□□□ -2.13
CXXC1Q9P0U4 RNU7-106P-201ENST00000459514 67 ntBASIC1.74□□□□□ -2.13
CXXC1Q9P0U4 TRAJ51-201ENST00000504127 63 ntBASIC1.74□□□□□ -2.13
CXXC1Q9P0U4 RNU6-65P-201ENST00000516332 98 ntBASIC1.74□□□□□ -2.13
CXXC1Q9P0U4 AP003327.1-201ENST00000529684 127 ntBASIC1.74□□□□□ -2.13
CXXC1Q9P0U4 ZNF209P-201ENST00000593450 2304 ntBASIC1.74□□□□□ -2.13
CXXC1Q9P0U4 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.74□□□□□ -2.13
CXXC1Q9P0U4 MIR519A1-201ENST00000385257 85 ntBASIC1.73□□□□□ -2.13
CXXC1Q9P0U4 SNORA67.6-201ENST00000391093 99 ntBASIC1.73□□□□□ -2.13
CXXC1Q9P0U4 MIR1323-201ENST00000408090 73 ntBASIC1.73□□□□□ -2.13
CXXC1Q9P0U4 AC092628.1-201ENST00000436250 252 ntBASIC1.73□□□□□ -2.13
CXXC1Q9P0U4 RNU1-92P-201ENST00000517017 135 ntBASIC1.73□□□□□ -2.13
CXXC1Q9P0U4 MIR3202-2-201ENST00000635980 79 ntBASIC1.73□□□□□ -2.13
CXXC1Q9P0U4 RNU6-535P-201ENST00000384722 107 ntBASIC1.72□□□□□ -2.13
CXXC1Q9P0U4 MIR520F-201ENST00000384824 87 ntBASIC1.72□□□□□ -2.13
CXXC1Q9P0U4 MIR1827-201ENST00000408549 66 ntBASIC1.72□□□□□ -2.13
CXXC1Q9P0U4 RNU7-195P-201ENST00000458793 62 ntBASIC1.72□□□□□ -2.13
CXXC1Q9P0U4 snoU13.11-201ENST00000459219 104 ntBASIC1.72□□□□□ -2.13
CXXC1Q9P0U4 Y_RNA.809-201ENST00000516058 95 ntBASIC1.72□□□□□ -2.13
CXXC1Q9P0U4 AC138907.6-201ENST00000568401 126 ntBASIC1.72□□□□□ -2.13
CXXC1Q9P0U4 AC138869.1-201ENST00000568623 124 ntBASIC1.72□□□□□ -2.13
CXXC1Q9P0U4 MIR4536-1-201ENST00000583537 88 ntBASIC1.72□□□□□ -2.13
CXXC1Q9P0U4 RNU6-369P-201ENST00000362515 102 ntBASIC1.71□□□□□ -2.14
CXXC1Q9P0U4 Y_RNA.205-201ENST00000364128 113 ntBASIC1.71□□□□□ -2.14
CXXC1Q9P0U4 MIR1236-201ENST00000408340 102 ntBASIC1.71□□□□□ -2.14
CXXC1Q9P0U4 RNU7-171P-201ENST00000459581 62 ntBASIC1.71□□□□□ -2.14
CXXC1Q9P0U4 RNU6-448P-201ENST00000517052 107 ntBASIC1.71□□□□□ -2.14
CXXC1Q9P0U4 AL136317.1-201ENST00000612653 226 ntBASIC1.71□□□□□ -2.14
CXXC1Q9P0U4 AL353770.2-201ENST00000620024 78 ntBASIC1.71□□□□□ -2.14
CXXC1Q9P0U4 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
CXXC1Q9P0U4 RNU4-32P-201ENST00000363404 141 ntBASIC1.7□□□□□ -2.14
CXXC1Q9P0U4 AC097635.1-201ENST00000450678 155 ntBASIC1.7□□□□□ -2.14
CXXC1Q9P0U4 RNU7-56P-201ENST00000458744 62 ntBASIC1.7□□□□□ -2.14
CXXC1Q9P0U4 RNU7-85P-201ENST00000458851 63 ntBASIC1.7□□□□□ -2.14
CXXC1Q9P0U4 AC006160.2-201ENST00000637708 154 ntBASIC1.7□□□□□ -2.14
CXXC1Q9P0U4 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
CXXC1Q9P0U4 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
CXXC1Q9P0U4 MIR96-201ENST00000362288 78 ntBASIC1.69□□□□□ -2.14
CXXC1Q9P0U4 SNORD115-27-201ENST00000364430 82 ntBASIC1.69□□□□□ -2.14
CXXC1Q9P0U4 Y_RNA.283-201ENST00000364798 112 ntBASIC1.69□□□□□ -2.14
CXXC1Q9P0U4 MIR3122-201ENST00000577243 73 ntBASIC1.69□□□□□ -2.14
CXXC1Q9P0U4 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.69□□□□□ -2.14
CXXC1Q9P0U4 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.69□□□□□ -2.14
CXXC1Q9P0U4 RNU6-291P-201ENST00000384720 107 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms