Protein–RNA interactions for Protein: Q9NZ43

USE1, Vesicle transport protein USE1, humanhuman

Predictions only

Length 259 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USE1Q9NZ43 RNU6-479P-201ENST00000516348 105 ntBASIC-1.98□□□□□ -2.73
USE1Q9NZ43 RNU6-762P-201ENST00000517107 102 ntBASIC-1.98□□□□□ -2.73
USE1Q9NZ43 AC138907.4-201ENST00000570107 226 ntBASIC-1.98□□□□□ -2.73
USE1Q9NZ43 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-1.98□□□□□ -2.73
USE1Q9NZ43 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-1.98□□□□□ -2.73
USE1Q9NZ43 Y_RNA.16-201ENST00000362421 102 ntBASIC-1.99□□□□□ -2.73
USE1Q9NZ43 Y_RNA.214-201ENST00000364201 112 ntBASIC-1.99□□□□□ -2.73
USE1Q9NZ43 Y_RNA.239-201ENST00000364444 113 ntBASIC-1.99□□□□□ -2.73
USE1Q9NZ43 RNU6-616P-201ENST00000384353 107 ntBASIC-1.99□□□□□ -2.73
USE1Q9NZ43 MIR34C-201ENST00000384831 77 ntBASIC-1.99□□□□□ -2.73
USE1Q9NZ43 RNU6-243P-201ENST00000391140 107 ntBASIC-1.99□□□□□ -2.73
USE1Q9NZ43 RNU7-152P-201ENST00000458982 64 ntBASIC-1.99□□□□□ -2.73
USE1Q9NZ43 RNU6-976P-201ENST00000516086 111 ntBASIC-1.99□□□□□ -2.73
USE1Q9NZ43 RNA5SP236-201ENST00000516169 116 ntBASIC-1.99□□□□□ -2.73
USE1Q9NZ43 RNU6-592P-201ENST00000411333 103 ntBASIC-2□□□□□ -2.73
USE1Q9NZ43 RNU6-1057P-201ENST00000517162 102 ntBASIC-2□□□□□ -2.73
USE1Q9NZ43 Y_RNA.57-201ENST00000362806 113 ntBASIC-2.01□□□□□ -2.73
USE1Q9NZ43 Y_RNA.384-201ENST00000383909 102 ntBASIC-2.01□□□□□ -2.73
USE1Q9NZ43 Y_RNA.556-201ENST00000384677 113 ntBASIC-2.01□□□□□ -2.73
USE1Q9NZ43 MIR1285-2-201ENST00000408311 88 ntBASIC-2.01□□□□□ -2.73
USE1Q9NZ43 RNA5SP180-201ENST00000516181 101 ntBASIC-2.01□□□□□ -2.73
USE1Q9NZ43 MIR365A-201ENST00000362260 87 ntBASIC-2.03□□□□□ -2.73
USE1Q9NZ43 SNORD36A-201ENST00000362874 73 ntBASIC-2.03□□□□□ -2.73
USE1Q9NZ43 Y_RNA.353-201ENST00000365440 108 ntBASIC-2.03□□□□□ -2.73
USE1Q9NZ43 Y_RNA.521-201ENST00000384560 114 ntBASIC-2.03□□□□□ -2.73
USE1Q9NZ43 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-2.03□□□□□ -2.73
USE1Q9NZ43 RNU6-103P-201ENST00000363686 107 ntBASIC-2.04□□□□□ -2.74
USE1Q9NZ43 Y_RNA.181-201ENST00000363872 101 ntBASIC-2.04□□□□□ -2.74
USE1Q9NZ43 MIR124-2-201ENST00000385081 109 ntBASIC-2.04□□□□□ -2.74
USE1Q9NZ43 RNU6-1109P-201ENST00000391187 107 ntBASIC-2.04□□□□□ -2.74
USE1Q9NZ43 AC138393.2-201ENST00000414742 246 ntBASIC-2.04□□□□□ -2.74
USE1Q9NZ43 SCARNA24.2-201ENST00000516968 130 ntBASIC-2.04□□□□□ -2.74
USE1Q9NZ43 RNU6-957P-201ENST00000363652 99 ntBASIC-2.05□□□□□ -2.74
USE1Q9NZ43 RNU4-17P-201ENST00000365598 141 ntBASIC-2.05□□□□□ -2.74
USE1Q9NZ43 SNORD116-2-201ENST00000384274 95 ntBASIC-2.05□□□□□ -2.74
USE1Q9NZ43 SNORD38.2-201ENST00000384470 69 ntBASIC-2.05□□□□□ -2.74
USE1Q9NZ43 HLA-S-202ENST00000425174 53 ntBASIC-2.05□□□□□ -2.74
USE1Q9NZ43 SNORD2.1-201ENST00000458762 69 ntBASIC-2.05□□□□□ -2.74
USE1Q9NZ43 RNU6-277P-201ENST00000516272 106 ntBASIC-2.05□□□□□ -2.74
USE1Q9NZ43 SNORA40.15-201ENST00000516884 107 ntBASIC-2.05□□□□□ -2.74
USE1Q9NZ43 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-2.05□□□□□ -2.74
USE1Q9NZ43 AL365265.1-201ENST00000621045 234 ntBASIC-2.05□□□□□ -2.74
USE1Q9NZ43 Y_RNA.150-201ENST00000363562 102 ntBASIC-2.06□□□□□ -2.74
USE1Q9NZ43 SNORD114-4-201ENST00000363962 75 ntBASIC-2.06□□□□□ -2.74
USE1Q9NZ43 RNU6-54P-201ENST00000365563 107 ntBASIC-2.06□□□□□ -2.74
USE1Q9NZ43 RNU6-1215P-201ENST00000384441 102 ntBASIC-2.06□□□□□ -2.74
USE1Q9NZ43 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-2.06□□□□□ -2.74
USE1Q9NZ43 Y_RNA.244-201ENST00000364484 109 ntBASIC-2.07□□□□□ -2.74
USE1Q9NZ43 SNORD101-201ENST00000384027 73 ntBASIC-2.07□□□□□ -2.74
USE1Q9NZ43 RNU6-651P-201ENST00000411040 105 ntBASIC-2.07□□□□□ -2.74
USE1Q9NZ43 Y_RNA.644-201ENST00000459006 113 ntBASIC-2.07□□□□□ -2.74
USE1Q9NZ43 AC026421.1-201ENST00000519101 163 ntBASIC-2.07□□□□□ -2.74
USE1Q9NZ43 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-2.07□□□□□ -2.74
USE1Q9NZ43 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-2.07□□□□□ -2.74
USE1Q9NZ43 Y_RNA.76-201ENST00000362931 109 ntBASIC-2.08□□□□□ -2.74
USE1Q9NZ43 SNORD115-23-201ENST00000364461 82 ntBASIC-2.08□□□□□ -2.74
USE1Q9NZ43 RNU6-450P-201ENST00000364654 107 ntBASIC-2.08□□□□□ -2.74
USE1Q9NZ43 Y_RNA.326-201ENST00000365176 113 ntBASIC-2.08□□□□□ -2.74
USE1Q9NZ43 RNU6-876P-201ENST00000391295 104 ntBASIC-2.08□□□□□ -2.74
USE1Q9NZ43 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-2.08□□□□□ -2.74
USE1Q9NZ43 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-2.08□□□□□ -2.74
USE1Q9NZ43 MIR4744-201ENST00000581563 82 ntBASIC-2.08□□□□□ -2.74
USE1Q9NZ43 MIR4441-201ENST00000582623 100 ntBASIC-2.08□□□□□ -2.74
USE1Q9NZ43 MIR6773-201ENST00000612812 74 ntBASIC-2.08□□□□□ -2.74
USE1Q9NZ43 Y_RNA.6-201ENST00000362350 114 ntBASIC-2.09□□□□□ -2.74
USE1Q9NZ43 Y_RNA.121-201ENST00000363309 113 ntBASIC-2.09□□□□□ -2.74
USE1Q9NZ43 RNU6-1125P-201ENST00000363601 107 ntBASIC-2.09□□□□□ -2.74
USE1Q9NZ43 Y_RNA.298-201ENST00000364960 107 ntBASIC-2.09□□□□□ -2.74
USE1Q9NZ43 Y_RNA.413-201ENST00000384007 102 ntBASIC-2.09□□□□□ -2.74
USE1Q9NZ43 Y_RNA.754-201ENST00000476024 102 ntBASIC-2.09□□□□□ -2.74
USE1Q9NZ43 Y_RNA.790-201ENST00000614282 102 ntBASIC-2.09□□□□□ -2.74
USE1Q9NZ43 Y_RNA.782-201ENST00000614695 102 ntBASIC-2.09□□□□□ -2.74
USE1Q9NZ43 MIR1302-1-201ENST00000637932 143 ntBASIC-2.09□□□□□ -2.74
USE1Q9NZ43 MT-TL1-201ENST00000386347 75 ntBASIC-2.1□□□□□ -2.75
USE1Q9NZ43 MIR1252-201ENST00000408861 65 ntBASIC-2.1□□□□□ -2.75
USE1Q9NZ43 MIR4696-201ENST00000581431 70 ntBASIC-2.1□□□□□ -2.75
USE1Q9NZ43 AC073869.6-201ENST00000640656 341 ntBASIC-2.1□□□□□ -2.75
USE1Q9NZ43 RNU6-664P-201ENST00000362381 107 ntBASIC-2.11□□□□□ -2.75
USE1Q9NZ43 Y_RNA.44-201ENST00000362676 108 ntBASIC-2.11□□□□□ -2.75
USE1Q9NZ43 MIR29B1-201ENST00000385015 81 ntBASIC-2.11□□□□□ -2.75
USE1Q9NZ43 RNU6-823P-201ENST00000391042 103 ntBASIC-2.11□□□□□ -2.75
USE1Q9NZ43 Y_RNA.632-201ENST00000459189 102 ntBASIC-2.11□□□□□ -2.75
USE1Q9NZ43 Y_RNA.19-201ENST00000362462 99 ntBASIC-2.12□□□□□ -2.75
USE1Q9NZ43 Y_RNA.78-201ENST00000362970 110 ntBASIC-2.12□□□□□ -2.75
USE1Q9NZ43 Y_RNA.82-201ENST00000363000 102 ntBASIC-2.12□□□□□ -2.75
USE1Q9NZ43 Y_RNA.92-201ENST00000363043 102 ntBASIC-2.12□□□□□ -2.75
USE1Q9NZ43 RNU6-770P-201ENST00000363929 105 ntBASIC-2.12□□□□□ -2.75
USE1Q9NZ43 Y_RNA.235-201ENST00000364412 102 ntBASIC-2.12□□□□□ -2.75
USE1Q9NZ43 Y_RNA.306-201ENST00000365015 102 ntBASIC-2.12□□□□□ -2.75
USE1Q9NZ43 Y_RNA.312-201ENST00000365089 102 ntBASIC-2.12□□□□□ -2.75
USE1Q9NZ43 Y_RNA.322-201ENST00000365151 102 ntBASIC-2.12□□□□□ -2.75
USE1Q9NZ43 SNORA62.4-201ENST00000365504 151 ntBASIC-2.12□□□□□ -2.75
USE1Q9NZ43 MIRLET7B-201ENST00000385140 83 ntBASIC-2.12□□□□□ -2.75
USE1Q9NZ43 MIR527-201ENST00000385244 85 ntBASIC-2.12□□□□□ -2.75
USE1Q9NZ43 RNU6-576P-201ENST00000390854 102 ntBASIC-2.12□□□□□ -2.75
USE1Q9NZ43 MIR8485-201ENST00000401372 91 ntBASIC-2.12□□□□□ -2.75
USE1Q9NZ43 RNU7-134P-201ENST00000458997 64 ntBASIC-2.12□□□□□ -2.75
USE1Q9NZ43 Y_RNA.650-201ENST00000459002 102 ntBASIC-2.12□□□□□ -2.75
USE1Q9NZ43 RNY3P15-201ENST00000516297 97 ntBASIC-2.12□□□□□ -2.75
USE1Q9NZ43 Y_RNA.777-201ENST00000516982 102 ntBASIC-2.12□□□□□ -2.75
Retrieved 100 of 98,524 protein–RNA pairs in 275.3 ms