Protein–RNA interactions for Protein: Q9NRJ3

CCL28, C-C motif chemokine 28, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28Q9NRJ3 MIR6514-201ENST00000622549 70 ntBASIC-0.25□□□□□ -2.45
CCL28Q9NRJ3 Y_RNA.115-201ENST00000363272 98 ntBASIC-0.26□□□□□ -2.45
CCL28Q9NRJ3 Y_RNA.188-201ENST00000363952 111 ntBASIC-0.26□□□□□ -2.45
CCL28Q9NRJ3 Y_RNA.342-201ENST00000365352 113 ntBASIC-0.26□□□□□ -2.45
CCL28Q9NRJ3 SNORD38.2-201ENST00000384470 69 ntBASIC-0.26□□□□□ -2.45
CCL28Q9NRJ3 Y_RNA.552-201ENST00000384665 112 ntBASIC-0.26□□□□□ -2.45
CCL28Q9NRJ3 MIR876-201ENST00000401147 81 ntBASIC-0.26□□□□□ -2.45
CCL28Q9NRJ3 RNU7-106P-201ENST00000459514 67 ntBASIC-0.26□□□□□ -2.45
CCL28Q9NRJ3 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.26□□□□□ -2.45
CCL28Q9NRJ3 RNA5SP480-201ENST00000516840 109 ntBASIC-0.26□□□□□ -2.45
CCL28Q9NRJ3 CR383656.4-201ENST00000546909 122 ntBASIC-0.26□□□□□ -2.45
CCL28Q9NRJ3 MIR3121-201ENST00000579680 77 ntBASIC-0.26□□□□□ -2.45
CCL28Q9NRJ3 MIR148A-201ENST00000362215 68 ntBASIC-0.27□□□□□ -2.45
CCL28Q9NRJ3 RNU6-915P-201ENST00000364943 103 ntBASIC-0.27□□□□□ -2.45
CCL28Q9NRJ3 RNU6-46P-201ENST00000383860 107 ntBASIC-0.27□□□□□ -2.45
CCL28Q9NRJ3 RNU6-460P-201ENST00000391158 108 ntBASIC-0.27□□□□□ -2.45
CCL28Q9NRJ3 RNU6-138P-201ENST00000515952 107 ntBASIC-0.27□□□□□ -2.45
CCL28Q9NRJ3 RNU6-521P-201ENST00000516663 105 ntBASIC-0.27□□□□□ -2.45
CCL28Q9NRJ3 Y_RNA.700-201ENST00000516806 100 ntBASIC-0.27□□□□□ -2.45
CCL28Q9NRJ3 RNU6-1271P-201ENST00000517049 105 ntBASIC-0.27□□□□□ -2.45
CCL28Q9NRJ3 Y_RNA.773-201ENST00000607168 90 ntBASIC-0.27□□□□□ -2.45
CCL28Q9NRJ3 AC084368.1-201ENST00000620935 65 ntBASIC-0.27□□□□□ -2.45
CCL28Q9NRJ3 Y_RNA.35-201ENST00000362601 101 ntBASIC-0.28□□□□□ -2.45
CCL28Q9NRJ3 SNORA18.1-201ENST00000363418 128 ntBASIC-0.28□□□□□ -2.45
CCL28Q9NRJ3 RNU6-379P-201ENST00000363813 104 ntBASIC-0.28□□□□□ -2.45
CCL28Q9NRJ3 RNU6-151P-201ENST00000364158 107 ntBASIC-0.28□□□□□ -2.45
CCL28Q9NRJ3 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.28□□□□□ -2.45
CCL28Q9NRJ3 SNORD115-44-201ENST00000365391 82 ntBASIC-0.28□□□□□ -2.45
CCL28Q9NRJ3 MT-TI-201ENST00000387365 69 ntBASIC-0.28□□□□□ -2.45
CCL28Q9NRJ3 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.28□□□□□ -2.45
CCL28Q9NRJ3 IGKV1-22-201ENST00000524313 326 ntBASIC-0.28□□□□□ -2.45
CCL28Q9NRJ3 Y_RNA.778-201ENST00000620203 90 ntBASIC-0.28□□□□□ -2.45
CCL28Q9NRJ3 Y_RNA.29-201ENST00000362570 113 ntBASIC-0.29□□□□□ -2.46
CCL28Q9NRJ3 Y_RNA.213-201ENST00000364178 111 ntBASIC-0.29□□□□□ -2.46
CCL28Q9NRJ3 RNU1-141P-201ENST00000364623 158 ntBASIC-0.29□□□□□ -2.46
CCL28Q9NRJ3 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-0.29□□□□□ -2.46
CCL28Q9NRJ3 SNORD4A-201ENST00000459174 72 ntBASIC-0.29□□□□□ -2.46
CCL28Q9NRJ3 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.29□□□□□ -2.46
CCL28Q9NRJ3 AL109933.3-201ENST00000619095 188 ntBASIC-0.29□□□□□ -2.46
CCL28Q9NRJ3 AC021753.1-201ENST00000635724 168 ntBASIC-0.29□□□□□ -2.46
CCL28Q9NRJ3 AC099654.10-201ENST00000640395 161 ntBASIC-0.29□□□□□ -2.46
CCL28Q9NRJ3 Y_RNA.401-201ENST00000383965 117 ntBASIC-0.3□□□□□ -2.46
CCL28Q9NRJ3 MIR516A2-201ENST00000384888 90 ntBASIC-0.3□□□□□ -2.46
CCL28Q9NRJ3 MIR516A1-201ENST00000385033 90 ntBASIC-0.3□□□□□ -2.46
CCL28Q9NRJ3 MIR759-201ENST00000390224 91 ntBASIC-0.3□□□□□ -2.46
CCL28Q9NRJ3 SNORA81.3-201ENST00000517283 198 ntBASIC-0.3□□□□□ -2.46
CCL28Q9NRJ3 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.31□□□□□ -2.46
CCL28Q9NRJ3 Y_RNA.85-201ENST00000363014 111 ntBASIC-0.31□□□□□ -2.46
CCL28Q9NRJ3 Y_RNA.114-201ENST00000363265 113 ntBASIC-0.31□□□□□ -2.46
CCL28Q9NRJ3 Y_RNA.198-201ENST00000364013 98 ntBASIC-0.31□□□□□ -2.46
CCL28Q9NRJ3 RNU6-647P-201ENST00000364243 107 ntBASIC-0.31□□□□□ -2.46
CCL28Q9NRJ3 MIR617-201ENST00000385030 97 ntBASIC-0.31□□□□□ -2.46
CCL28Q9NRJ3 MIR519E-201ENST00000385075 84 ntBASIC-0.31□□□□□ -2.46
CCL28Q9NRJ3 MIR516B1-201ENST00000385211 90 ntBASIC-0.31□□□□□ -2.46
CCL28Q9NRJ3 MIR214-201ENST00000385214 110 ntBASIC-0.31□□□□□ -2.46
CCL28Q9NRJ3 MT-TG-201ENST00000387429 68 ntBASIC-0.31□□□□□ -2.46
CCL28Q9NRJ3 Y_RNA.580-201ENST00000391004 95 ntBASIC-0.31□□□□□ -2.46
CCL28Q9NRJ3 MIR513C-201ENST00000401352 84 ntBASIC-0.31□□□□□ -2.46
CCL28Q9NRJ3 RNA5SP136-201ENST00000410906 107 ntBASIC-0.31□□□□□ -2.46
CCL28Q9NRJ3 AC109327.2-201ENST00000448339 378 ntBASIC-0.31□□□□□ -2.46
CCL28Q9NRJ3 RNU6-388P-201ENST00000517012 105 ntBASIC-0.31□□□□□ -2.46
CCL28Q9NRJ3 RNU6-389P-201ENST00000517048 105 ntBASIC-0.31□□□□□ -2.46
CCL28Q9NRJ3 MIR548AG2-201ENST00000581228 64 ntBASIC-0.31□□□□□ -2.46
CCL28Q9NRJ3 MIR7111-201ENST00000619751 72 ntBASIC-0.31□□□□□ -2.46
CCL28Q9NRJ3 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.31□□□□□ -2.46
CCL28Q9NRJ3 MIR1255B1-201ENST00000636325 63 ntBASIC-0.31□□□□□ -2.46
CCL28Q9NRJ3 SNORD114-12-201ENST00000365400 75 ntBASIC-0.32□□□□□ -2.46
CCL28Q9NRJ3 AC074198.2-201ENST00000508153 258 ntBASIC-0.32□□□□□ -2.46
CCL28Q9NRJ3 RN7SKP19-201ENST00000516016 252 ntBASIC-0.32□□□□□ -2.46
CCL28Q9NRJ3 AC069503.3-201ENST00000618674 145 ntBASIC-0.32□□□□□ -2.46
CCL28Q9NRJ3 RNU6-1130P-201ENST00000365434 107 ntBASIC-0.33□□□□□ -2.46
CCL28Q9NRJ3 SNORD116-18-201ENST00000383961 92 ntBASIC-0.33□□□□□ -2.46
CCL28Q9NRJ3 Y_RNA.540-201ENST00000384638 111 ntBASIC-0.33□□□□□ -2.46
CCL28Q9NRJ3 AC093423.1-201ENST00000440817 142 ntBASIC-0.33□□□□□ -2.46
CCL28Q9NRJ3 AP001328.1-201ENST00000528550 176 ntBASIC-0.33□□□□□ -2.46
CCL28Q9NRJ3 MIR4473-201ENST00000583731 91 ntBASIC-0.33□□□□□ -2.46
CCL28Q9NRJ3 AC004792.1-201ENST00000614523 137 ntBASIC-0.33□□□□□ -2.46
CCL28Q9NRJ3 AP001340.1-201ENST00000624405 217 ntBASIC-0.33□□□□□ -2.46
CCL28Q9NRJ3 Y_RNA.280-201ENST00000364765 112 ntBASIC-0.34□□□□□ -2.46
CCL28Q9NRJ3 Y_RNA.294-201ENST00000364916 102 ntBASIC-0.34□□□□□ -2.46
CCL28Q9NRJ3 Y_RNA.785-201ENST00000384290 109 ntBASIC-0.34□□□□□ -2.46
CCL28Q9NRJ3 RNU6-1254P-201ENST00000391266 104 ntBASIC-0.34□□□□□ -2.46
CCL28Q9NRJ3 MIR2113-201ENST00000459007 91 ntBASIC-0.34□□□□□ -2.46
CCL28Q9NRJ3 MIR6779-201ENST00000617283 64 ntBASIC-0.34□□□□□ -2.46
CCL28Q9NRJ3 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-0.34□□□□□ -2.46
CCL28Q9NRJ3 RNU6-1313P-201ENST00000362622 102 ntBASIC-0.35□□□□□ -2.47
CCL28Q9NRJ3 RNA5SP457-201ENST00000363657 124 ntBASIC-0.35□□□□□ -2.47
CCL28Q9NRJ3 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.35□□□□□ -2.47
CCL28Q9NRJ3 MIR548D2-201ENST00000384955 97 ntBASIC-0.35□□□□□ -2.47
CCL28Q9NRJ3 MIR1263-201ENST00000408324 86 ntBASIC-0.35□□□□□ -2.47
CCL28Q9NRJ3 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.35□□□□□ -2.47
CCL28Q9NRJ3 SNORA7.5-201ENST00000410672 110 ntBASIC-0.35□□□□□ -2.47
CCL28Q9NRJ3 RNU6-1006P-201ENST00000516998 103 ntBASIC-0.35□□□□□ -2.47
CCL28Q9NRJ3 YWHAEP2-201ENST00000580066 112 ntBASIC-0.35□□□□□ -2.47
CCL28Q9NRJ3 AL670379.3-201ENST00000605040 251 ntBASIC-0.35□□□□□ -2.47
CCL28Q9NRJ3 TRDV1-202ENST00000621643 102 ntBASIC-0.35□□□□□ -2.47
CCL28Q9NRJ3 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.36□□□□□ -2.47
CCL28Q9NRJ3 RNU6-1163P-201ENST00000364516 107 ntBASIC-0.36□□□□□ -2.47
CCL28Q9NRJ3 SNORD49B-201ENST00000365172 72 ntBASIC-0.36□□□□□ -2.47
CCL28Q9NRJ3 Y_RNA.420-201ENST00000384043 110 ntBASIC-0.36□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 174.6 ms