Protein–RNA interactions for Protein: Q9NP99

TREM1, Triggering receptor expressed on myeloid cells 1, humanhuman

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1Q9NP99 Y_RNA.80-201ENST00000362996 102 ntBASIC-1.67□□□□□ -2.68
TREM1Q9NP99 SNORD18.1-201ENST00000363807 70 ntBASIC-1.67□□□□□ -2.68
TREM1Q9NP99 Y_RNA.187-201ENST00000363918 113 ntBASIC-1.67□□□□□ -2.68
TREM1Q9NP99 Y_RNA.387-201ENST00000383918 102 ntBASIC-1.67□□□□□ -2.68
TREM1Q9NP99 Y_RNA.485-201ENST00000384395 102 ntBASIC-1.67□□□□□ -2.68
TREM1Q9NP99 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.67□□□□□ -2.68
TREM1Q9NP99 RNU6-337P-201ENST00000391243 106 ntBASIC-1.67□□□□□ -2.68
TREM1Q9NP99 RNU4-43P-201ENST00000410628 137 ntBASIC-1.67□□□□□ -2.68
TREM1Q9NP99 Y_RNA.65-201ENST00000362846 100 ntBASIC-1.68□□□□□ -2.68
TREM1Q9NP99 Y_RNA.214-201ENST00000364201 112 ntBASIC-1.68□□□□□ -2.68
TREM1Q9NP99 Y_RNA.328-201ENST00000365208 113 ntBASIC-1.68□□□□□ -2.68
TREM1Q9NP99 RNU6-1130P-201ENST00000365434 107 ntBASIC-1.68□□□□□ -2.68
TREM1Q9NP99 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-1.68□□□□□ -2.68
TREM1Q9NP99 RNA5SP272-201ENST00000516095 111 ntBASIC-1.68□□□□□ -2.68
TREM1Q9NP99 RNU6-412P-201ENST00000516434 106 ntBASIC-1.68□□□□□ -2.68
TREM1Q9NP99 Y_RNA.700-201ENST00000516806 100 ntBASIC-1.68□□□□□ -2.68
TREM1Q9NP99 RNU6-453P-201ENST00000516819 85 ntBASIC-1.68□□□□□ -2.68
TREM1Q9NP99 Y_RNA.718-201ENST00000517110 102 ntBASIC-1.68□□□□□ -2.68
TREM1Q9NP99 AC068339.1-201ENST00000526965 141 ntBASIC-1.68□□□□□ -2.68
TREM1Q9NP99 AC087741.2-201ENST00000619415 172 ntBASIC-1.68□□□□□ -2.68
TREM1Q9NP99 AC091912.2-201ENST00000624798 167 ntBASIC-1.68□□□□□ -2.68
TREM1Q9NP99 SNORA2.1-201ENST00000363089 137 ntBASIC-1.69□□□□□ -2.68
TREM1Q9NP99 snoU2_19.4-201ENST00000364329 80 ntBASIC-1.69□□□□□ -2.68
TREM1Q9NP99 RNU6-54P-201ENST00000365563 107 ntBASIC-1.69□□□□□ -2.68
TREM1Q9NP99 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.69□□□□□ -2.68
TREM1Q9NP99 MIR548H1-201ENST00000408610 102 ntBASIC-1.69□□□□□ -2.68
TREM1Q9NP99 MIR376B-201ENST00000614515 100 ntBASIC-1.69□□□□□ -2.68
TREM1Q9NP99 Y_RNA.160-201ENST00000363677 92 ntBASIC-1.7□□□□□ -2.68
TREM1Q9NP99 Y_RNA.180-201ENST00000363867 113 ntBASIC-1.7□□□□□ -2.68
TREM1Q9NP99 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.7□□□□□ -2.68
TREM1Q9NP99 RNU2-51P-201ENST00000410708 197 ntBASIC-1.7□□□□□ -2.68
TREM1Q9NP99 RNU7-152P-201ENST00000458982 64 ntBASIC-1.7□□□□□ -2.68
TREM1Q9NP99 AC009779.6-201ENST00000603972 165 ntBASIC-1.7□□□□□ -2.68
TREM1Q9NP99 MIR335-201ENST00000362173 94 ntBASIC-1.71□□□□□ -2.68
TREM1Q9NP99 SNORD116-2-201ENST00000384274 95 ntBASIC-1.71□□□□□ -2.68
TREM1Q9NP99 Y_RNA.488-201ENST00000384403 102 ntBASIC-1.71□□□□□ -2.68
TREM1Q9NP99 Y_RNA.541-201ENST00000384640 113 ntBASIC-1.71□□□□□ -2.68
TREM1Q9NP99 SNORD116-6-201ENST00000384711 96 ntBASIC-1.71□□□□□ -2.68
TREM1Q9NP99 RNU6-466P-201ENST00000391224 103 ntBASIC-1.71□□□□□ -2.68
TREM1Q9NP99 MIR1302-11-201ENST00000408051 138 ntBASIC-1.71□□□□□ -2.68
TREM1Q9NP99 MIR1302-9-201ENST00000408365 138 ntBASIC-1.71□□□□□ -2.68
TREM1Q9NP99 MIR1302-10-201ENST00000408734 138 ntBASIC-1.71□□□□□ -2.68
TREM1Q9NP99 RNU2-4P-201ENST00000606190 192 ntBASIC-1.71□□□□□ -2.68
TREM1Q9NP99 MIR1302-2-201ENST00000607096 138 ntBASIC-1.71□□□□□ -2.68
TREM1Q9NP99 AC090574.1-201ENST00000623186 233 ntBASIC-1.71□□□□□ -2.68
TREM1Q9NP99 Y_RNA.154-201ENST00000363624 102 ntBASIC-1.72□□□□□ -2.68
TREM1Q9NP99 Y_RNA.299-201ENST00000364973 94 ntBASIC-1.72□□□□□ -2.68
TREM1Q9NP99 RNU6-472P-201ENST00000384299 107 ntBASIC-1.72□□□□□ -2.68
TREM1Q9NP99 RNU4-61P-201ENST00000411243 107 ntBASIC-1.72□□□□□ -2.68
TREM1Q9NP99 RNU6-976P-201ENST00000516086 111 ntBASIC-1.72□□□□□ -2.68
TREM1Q9NP99 RNU2-35P-201ENST00000516446 142 ntBASIC-1.72□□□□□ -2.68
TREM1Q9NP99 MIR4464-201ENST00000580818 92 ntBASIC-1.72□□□□□ -2.68
TREM1Q9NP99 AC084782.3-201ENST00000612282 578 ntBASIC-1.72□□□□□ -2.68
TREM1Q9NP99 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-1.72□□□□□ -2.68
TREM1Q9NP99 MIR6874-201ENST00000635894 71 ntBASIC-1.72□□□□□ -2.68
TREM1Q9NP99 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC-1.73□□□□□ -2.69
TREM1Q9NP99 Y_RNA.76-201ENST00000362931 109 ntBASIC-1.73□□□□□ -2.69
TREM1Q9NP99 RNU6-704P-201ENST00000364162 103 ntBASIC-1.73□□□□□ -2.69
TREM1Q9NP99 RNU6-978P-201ENST00000364371 103 ntBASIC-1.73□□□□□ -2.69
TREM1Q9NP99 SNORA62.4-201ENST00000365504 151 ntBASIC-1.73□□□□□ -2.69
TREM1Q9NP99 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.73□□□□□ -2.69
TREM1Q9NP99 Y_RNA.521-201ENST00000384560 114 ntBASIC-1.73□□□□□ -2.69
TREM1Q9NP99 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.73□□□□□ -2.69
TREM1Q9NP99 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.73□□□□□ -2.69
TREM1Q9NP99 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.73□□□□□ -2.69
TREM1Q9NP99 RNU6-208P-201ENST00000362431 107 ntBASIC-1.74□□□□□ -2.69
TREM1Q9NP99 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.74□□□□□ -2.69
TREM1Q9NP99 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.74□□□□□ -2.69
TREM1Q9NP99 RNA5SP331-201ENST00000364986 107 ntBASIC-1.74□□□□□ -2.69
TREM1Q9NP99 Y_RNA.389-201ENST00000383924 113 ntBASIC-1.74□□□□□ -2.69
TREM1Q9NP99 RNU6-746P-201ENST00000384112 109 ntBASIC-1.74□□□□□ -2.69
TREM1Q9NP99 MIR1468-201ENST00000410600 86 ntBASIC-1.74□□□□□ -2.69
TREM1Q9NP99 SNORD42B-201ENST00000458893 67 ntBASIC-1.74□□□□□ -2.69
TREM1Q9NP99 RNU6-732P-201ENST00000516033 103 ntBASIC-1.74□□□□□ -2.69
TREM1Q9NP99 RNU7-2P-201ENST00000516096 62 ntBASIC-1.74□□□□□ -2.69
TREM1Q9NP99 RNU6-561P-201ENST00000516222 102 ntBASIC-1.74□□□□□ -2.69
TREM1Q9NP99 Y_RNA.5-201ENST00000362334 102 ntBASIC-1.75□□□□□ -2.69
TREM1Q9NP99 Y_RNA.357-201ENST00000365487 109 ntBASIC-1.75□□□□□ -2.69
TREM1Q9NP99 Y_RNA.384-201ENST00000383909 102 ntBASIC-1.75□□□□□ -2.69
TREM1Q9NP99 RNU6-1254P-201ENST00000391266 104 ntBASIC-1.75□□□□□ -2.69
TREM1Q9NP99 RNU4-69P-201ENST00000410677 143 ntBASIC-1.75□□□□□ -2.69
TREM1Q9NP99 IGHVII-40-1-201ENST00000517316 58 ntBASIC-1.75□□□□□ -2.69
TREM1Q9NP99 AC026407.1-201ENST00000518369 204 ntBASIC-1.75□□□□□ -2.69
TREM1Q9NP99 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-1.75□□□□□ -2.69
TREM1Q9NP99 U4.2-201ENST00000618561 85 ntBASIC-1.75□□□□□ -2.69
TREM1Q9NP99 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-1.75□□□□□ -2.69
TREM1Q9NP99 RNU6-957P-201ENST00000363652 99 ntBASIC-1.76□□□□□ -2.69
TREM1Q9NP99 SNORD27-201ENST00000363981 72 ntBASIC-1.76□□□□□ -2.69
TREM1Q9NP99 RNU6-1289P-201ENST00000384431 106 ntBASIC-1.76□□□□□ -2.69
TREM1Q9NP99 Y_RNA.556-201ENST00000384677 113 ntBASIC-1.76□□□□□ -2.69
TREM1Q9NP99 RNU6-1104P-201ENST00000384723 104 ntBASIC-1.76□□□□□ -2.69
TREM1Q9NP99 SNORD36A-201ENST00000362874 73 ntBASIC-1.77□□□□□ -2.69
TREM1Q9NP99 RNY4P6-201ENST00000363667 96 ntBASIC-1.77□□□□□ -2.69
TREM1Q9NP99 SNORD114-4-201ENST00000363962 75 ntBASIC-1.77□□□□□ -2.69
TREM1Q9NP99 RNU6-1215P-201ENST00000384441 102 ntBASIC-1.77□□□□□ -2.69
TREM1Q9NP99 MIR216B-201ENST00000390186 82 ntBASIC-1.77□□□□□ -2.69
TREM1Q9NP99 RNU6-243P-201ENST00000391140 107 ntBASIC-1.77□□□□□ -2.69
TREM1Q9NP99 Y_RNA.674-201ENST00000516362 113 ntBASIC-1.77□□□□□ -2.69
TREM1Q9NP99 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-1.77□□□□□ -2.69
TREM1Q9NP99 AC080013.6-201ENST00000606185 215 ntBASIC-1.77□□□□□ -2.69
Retrieved 100 of 98,524 protein–RNA pairs in 170.3 ms