Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 RNU6-535P-201ENST00000384722 107 ntBASIC0.95□□□□□ -2.26
VTA1Q9NP79 MIR635-201ENST00000384830 98 ntBASIC0.95□□□□□ -2.26
VTA1Q9NP79 MIR577-201ENST00000385196 96 ntBASIC0.95□□□□□ -2.26
VTA1Q9NP79 SNRPGP12-201ENST00000449481 213 ntBASIC0.95□□□□□ -2.26
VTA1Q9NP79 RNU6-919P-201ENST00000516731 104 ntBASIC0.95□□□□□ -2.26
VTA1Q9NP79 AC141557.1-201ENST00000540982 400 ntBASIC0.95□□□□□ -2.26
VTA1Q9NP79 AC138907.6-201ENST00000568401 126 ntBASIC0.95□□□□□ -2.26
VTA1Q9NP79 AC138869.1-201ENST00000568623 124 ntBASIC0.95□□□□□ -2.26
VTA1Q9NP79 MIR3612-201ENST00000579753 87 ntBASIC0.95□□□□□ -2.26
VTA1Q9NP79 RNU6-1099P-201ENST00000363533 107 ntBASIC0.94□□□□□ -2.26
VTA1Q9NP79 RNU6-469P-201ENST00000516253 101 ntBASIC0.94□□□□□ -2.26
VTA1Q9NP79 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.94□□□□□ -2.26
VTA1Q9NP79 RNU6-215P-201ENST00000365169 102 ntBASIC0.93□□□□□ -2.26
VTA1Q9NP79 RNU6-291P-201ENST00000384720 107 ntBASIC0.93□□□□□ -2.26
VTA1Q9NP79 MIR519A1-201ENST00000385257 85 ntBASIC0.93□□□□□ -2.26
VTA1Q9NP79 MIR548G-201ENST00000408442 89 ntBASIC0.93□□□□□ -2.26
VTA1Q9NP79 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.93□□□□□ -2.26
VTA1Q9NP79 RNA5SP436-201ENST00000516020 115 ntBASIC0.93□□□□□ -2.26
VTA1Q9NP79 MIR4653-201ENST00000585107 83 ntBASIC0.93□□□□□ -2.26
VTA1Q9NP79 uc_338.16-201ENST00000621804 95 ntBASIC0.93□□□□□ -2.26
VTA1Q9NP79 Y_RNA.163-201ENST00000363702 113 ntBASIC0.92□□□□□ -2.26
VTA1Q9NP79 SNORD45B-201ENST00000364617 72 ntBASIC0.92□□□□□ -2.26
VTA1Q9NP79 Y_RNA.601-201ENST00000410500 113 ntBASIC0.92□□□□□ -2.26
VTA1Q9NP79 RNU6-170P-201ENST00000362832 104 ntBASIC0.91□□□□□ -2.26
VTA1Q9NP79 ACA64.5-201ENST00000516207 127 ntBASIC0.91□□□□□ -2.26
VTA1Q9NP79 MIR18A-201ENST00000362310 71 ntBASIC0.9□□□□□ -2.27
VTA1Q9NP79 Y_RNA.96-201ENST00000363092 109 ntBASIC0.9□□□□□ -2.27
VTA1Q9NP79 RNU6-755P-201ENST00000364400 103 ntBASIC0.9□□□□□ -2.27
VTA1Q9NP79 Y_RNA.342-201ENST00000365352 113 ntBASIC0.9□□□□□ -2.27
VTA1Q9NP79 RNY1P4-201ENST00000384595 115 ntBASIC0.9□□□□□ -2.27
VTA1Q9NP79 RNY4P18-201ENST00000391107 89 ntBASIC0.9□□□□□ -2.27
VTA1Q9NP79 SPINT5P-201ENST00000448174 155 ntBASIC0.9□□□□□ -2.27
VTA1Q9NP79 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.9□□□□□ -2.27
VTA1Q9NP79 MIR4714-201ENST00000580728 77 ntBASIC0.9□□□□□ -2.27
VTA1Q9NP79 RN7SL793P-201ENST00000583259 296 ntBASIC0.9□□□□□ -2.27
VTA1Q9NP79 Y_RNA.173-201ENST00000363776 113 ntBASIC0.89□□□□□ -2.27
VTA1Q9NP79 SNORD114-2-201ENST00000363953 78 ntBASIC0.89□□□□□ -2.27
VTA1Q9NP79 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.89□□□□□ -2.27
VTA1Q9NP79 RNU6-351P-201ENST00000516097 100 ntBASIC0.89□□□□□ -2.27
VTA1Q9NP79 RNU6-850P-201ENST00000516934 103 ntBASIC0.89□□□□□ -2.27
VTA1Q9NP79 RNU6-1125P-201ENST00000363601 107 ntBASIC0.88□□□□□ -2.27
VTA1Q9NP79 RNU6-480P-201ENST00000384332 107 ntBASIC0.88□□□□□ -2.27
VTA1Q9NP79 RNU6-106P-201ENST00000384405 107 ntBASIC0.88□□□□□ -2.27
VTA1Q9NP79 SNORD20-201ENST00000384550 80 ntBASIC0.88□□□□□ -2.27
VTA1Q9NP79 MIR216A-201ENST00000385063 110 ntBASIC0.88□□□□□ -2.27
VTA1Q9NP79 BX276092.1-201ENST00000427368 251 ntBASIC0.88□□□□□ -2.27
VTA1Q9NP79 AC092628.1-201ENST00000436250 252 ntBASIC0.88□□□□□ -2.27
VTA1Q9NP79 AC097635.1-201ENST00000450678 155 ntBASIC0.88□□□□□ -2.27
VTA1Q9NP79 AC244505.6-201ENST00000452829 130 ntBASIC0.88□□□□□ -2.27
VTA1Q9NP79 PSMC1P5-201ENST00000512850 177 ntBASIC0.88□□□□□ -2.27
VTA1Q9NP79 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.88□□□□□ -2.27
VTA1Q9NP79 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.88□□□□□ -2.27
VTA1Q9NP79 RNA5SP222-201ENST00000411039 105 ntBASIC0.87□□□□□ -2.27
VTA1Q9NP79 RNU6-904P-201ENST00000516206 101 ntBASIC0.87□□□□□ -2.27
VTA1Q9NP79 SNORA31.14-201ENST00000516728 116 ntBASIC0.87□□□□□ -2.27
VTA1Q9NP79 MIR4639-201ENST00000584938 69 ntBASIC0.87□□□□□ -2.27
VTA1Q9NP79 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.87□□□□□ -2.27
VTA1Q9NP79 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC0.87□□□□□ -2.27
VTA1Q9NP79 Y_RNA.32-201ENST00000362589 110 ntBASIC0.86□□□□□ -2.27
VTA1Q9NP79 Y_RNA.567-201ENST00000384736 106 ntBASIC0.86□□□□□ -2.27
VTA1Q9NP79 MIR146A-201ENST00000385201 99 ntBASIC0.86□□□□□ -2.27
VTA1Q9NP79 Y_RNA.659-201ENST00000515994 113 ntBASIC0.86□□□□□ -2.27
VTA1Q9NP79 Y_RNA.818-201ENST00000618813 71 ntBASIC0.86□□□□□ -2.27
VTA1Q9NP79 MIR6835-201ENST00000621552 64 ntBASIC0.86□□□□□ -2.27
VTA1Q9NP79 RNU6-766P-201ENST00000362478 107 ntBASIC0.85□□□□□ -2.27
VTA1Q9NP79 Y_RNA.30-201ENST00000362572 97 ntBASIC0.85□□□□□ -2.27
VTA1Q9NP79 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.85□□□□□ -2.27
VTA1Q9NP79 AL035461.1-201ENST00000421490 332 ntBASIC0.85□□□□□ -2.27
VTA1Q9NP79 MIR3678-201ENST00000578455 94 ntBASIC0.85□□□□□ -2.27
VTA1Q9NP79 MIR6866-201ENST00000638146 69 ntBASIC0.85□□□□□ -2.27
VTA1Q9NP79 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.84□□□□□ -2.27
VTA1Q9NP79 Y_RNA.178-201ENST00000363832 102 ntBASIC0.84□□□□□ -2.27
VTA1Q9NP79 RNU6-1229P-201ENST00000364295 107 ntBASIC0.84□□□□□ -2.27
VTA1Q9NP79 Y_RNA.247-201ENST00000364500 92 ntBASIC0.84□□□□□ -2.27
VTA1Q9NP79 RNU6-554P-201ENST00000410466 106 ntBASIC0.84□□□□□ -2.27
VTA1Q9NP79 SNORD63B-201ENST00000411005 70 ntBASIC0.84□□□□□ -2.27
VTA1Q9NP79 AL031737.1-201ENST00000450125 223 ntBASIC0.84□□□□□ -2.27
VTA1Q9NP79 SCARNA23-201ENST00000516060 130 ntBASIC0.84□□□□□ -2.27
VTA1Q9NP79 RNU6-1260P-201ENST00000362944 107 ntBASIC0.83□□□□□ -2.28
VTA1Q9NP79 Y_RNA.95-201ENST00000363079 95 ntBASIC0.83□□□□□ -2.28
VTA1Q9NP79 SNORA51.5-201ENST00000384126 131 ntBASIC0.83□□□□□ -2.28
VTA1Q9NP79 MIR508-201ENST00000384857 115 ntBASIC0.83□□□□□ -2.28
VTA1Q9NP79 TRAJ51-201ENST00000504127 63 ntBASIC0.83□□□□□ -2.28
VTA1Q9NP79 Y_RNA.544-201ENST00000384650 113 ntBASIC0.82□□□□□ -2.28
VTA1Q9NP79 MIR140-201ENST00000385282 100 ntBASIC0.82□□□□□ -2.28
VTA1Q9NP79 RNU6-1254P-201ENST00000391266 104 ntBASIC0.82□□□□□ -2.28
VTA1Q9NP79 AL590095.2-201ENST00000604136 117 ntBASIC0.82□□□□□ -2.28
VTA1Q9NP79 Y_RNA.57-201ENST00000362806 113 ntBASIC0.81□□□□□ -2.28
VTA1Q9NP79 RNU6-1163P-201ENST00000364516 107 ntBASIC0.81□□□□□ -2.28
VTA1Q9NP79 RNU6-756P-201ENST00000383997 107 ntBASIC0.81□□□□□ -2.28
VTA1Q9NP79 MIR6513-201ENST00000621188 64 ntBASIC0.81□□□□□ -2.28
VTA1Q9NP79 SNORD18A-201ENST00000363753 72 ntBASIC0.8□□□□□ -2.28
VTA1Q9NP79 SNORA36.2-201ENST00000384004 127 ntBASIC0.8□□□□□ -2.28
VTA1Q9NP79 MIR193B-201ENST00000384907 83 ntBASIC0.8□□□□□ -2.28
VTA1Q9NP79 RNU6-243P-201ENST00000391140 107 ntBASIC0.8□□□□□ -2.28
VTA1Q9NP79 Y_RNA.809-201ENST00000516058 95 ntBASIC0.8□□□□□ -2.28
VTA1Q9NP79 uc_338.28-201ENST00000612082 187 ntBASIC0.8□□□□□ -2.28
VTA1Q9NP79 Y_RNA.93-201ENST00000363066 109 ntBASIC0.79□□□□□ -2.28
VTA1Q9NP79 RNA5SP245-201ENST00000364239 121 ntBASIC0.79□□□□□ -2.28
VTA1Q9NP79 SNORD28-201ENST00000384706 75 ntBASIC0.79□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 169.6 ms