Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 RNU6-1081P-201ENST00000384537 107 ntBASIC0.66□□□□□ -2.3
PAAF1Q9BRP4 Y_RNA.567-201ENST00000384736 106 ntBASIC0.66□□□□□ -2.3
PAAF1Q9BRP4 MIR548I2-201ENST00000408348 149 ntBASIC0.66□□□□□ -2.3
PAAF1Q9BRP4 RNA5SP193-201ENST00000410353 107 ntBASIC0.66□□□□□ -2.3
PAAF1Q9BRP4 AC098934.3-201ENST00000430450 190 ntBASIC0.66□□□□□ -2.3
PAAF1Q9BRP4 RNU6-406P-201ENST00000516470 107 ntBASIC0.66□□□□□ -2.3
PAAF1Q9BRP4 RNU6-90P-201ENST00000606352 106 ntBASIC0.66□□□□□ -2.3
PAAF1Q9BRP4 SNORD38.1-201ENST00000363863 68 ntBASIC0.65□□□□□ -2.31
PAAF1Q9BRP4 RNA5SP245-201ENST00000364239 121 ntBASIC0.65□□□□□ -2.31
PAAF1Q9BRP4 SNORD113-1-201ENST00000365321 69 ntBASIC0.65□□□□□ -2.31
PAAF1Q9BRP4 RNU6-571P-201ENST00000384128 107 ntBASIC0.65□□□□□ -2.31
PAAF1Q9BRP4 MIR5009-201ENST00000578736 100 ntBASIC0.65□□□□□ -2.31
PAAF1Q9BRP4 AL442128.1-201ENST00000615151 90 ntBASIC0.65□□□□□ -2.31
PAAF1Q9BRP4 AC092634.7-201ENST00000621022 103 ntBASIC0.65□□□□□ -2.31
PAAF1Q9BRP4 U2.22-201ENST00000636441 106 ntBASIC0.65□□□□□ -2.31
PAAF1Q9BRP4 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.64□□□□□ -2.31
PAAF1Q9BRP4 HSBP1P2-201ENST00000299671 229 ntBASIC0.64□□□□□ -2.31
PAAF1Q9BRP4 AC092628.1-201ENST00000436250 252 ntBASIC0.64□□□□□ -2.31
PAAF1Q9BRP4 RNA5SP94-201ENST00000516917 108 ntBASIC0.64□□□□□ -2.31
PAAF1Q9BRP4 MIR6779-201ENST00000617283 64 ntBASIC0.64□□□□□ -2.31
PAAF1Q9BRP4 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.64□□□□□ -2.31
PAAF1Q9BRP4 RNU6-834P-201ENST00000362367 110 ntBASIC0.63□□□□□ -2.31
PAAF1Q9BRP4 Y_RNA.281-201ENST00000364774 94 ntBASIC0.63□□□□□ -2.31
PAAF1Q9BRP4 RNU6-1201P-201ENST00000384227 107 ntBASIC0.63□□□□□ -2.31
PAAF1Q9BRP4 MIR216A-201ENST00000385063 110 ntBASIC0.63□□□□□ -2.31
PAAF1Q9BRP4 MIR548G-201ENST00000408442 89 ntBASIC0.63□□□□□ -2.31
PAAF1Q9BRP4 RNU6-850P-201ENST00000516934 103 ntBASIC0.63□□□□□ -2.31
PAAF1Q9BRP4 RN7SL793P-201ENST00000583259 296 ntBASIC0.63□□□□□ -2.31
PAAF1Q9BRP4 Y_RNA.36-201ENST00000362602 112 ntBASIC0.62□□□□□ -2.31
PAAF1Q9BRP4 RNU6-170P-201ENST00000362832 104 ntBASIC0.62□□□□□ -2.31
PAAF1Q9BRP4 SNORD18A-201ENST00000363753 72 ntBASIC0.62□□□□□ -2.31
PAAF1Q9BRP4 RNU6-1107P-201ENST00000364817 104 ntBASIC0.62□□□□□ -2.31
PAAF1Q9BRP4 RNY1P4-201ENST00000384595 115 ntBASIC0.62□□□□□ -2.31
PAAF1Q9BRP4 TRAJ51-201ENST00000504127 63 ntBASIC0.62□□□□□ -2.31
PAAF1Q9BRP4 MIR4711-201ENST00000578274 70 ntBASIC0.62□□□□□ -2.31
PAAF1Q9BRP4 MIR4694-201ENST00000578534 80 ntBASIC0.62□□□□□ -2.31
PAAF1Q9BRP4 MIR6129-201ENST00000616087 109 ntBASIC0.62□□□□□ -2.31
PAAF1Q9BRP4 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC0.62□□□□□ -2.31
PAAF1Q9BRP4 Y_RNA.342-201ENST00000365352 113 ntBASIC0.61□□□□□ -2.31
PAAF1Q9BRP4 RNU6-945P-201ENST00000383947 107 ntBASIC0.61□□□□□ -2.31
PAAF1Q9BRP4 SNORD71-201ENST00000411292 86 ntBASIC0.61□□□□□ -2.31
PAAF1Q9BRP4 AL353813.1-201ENST00000440700 253 ntBASIC0.61□□□□□ -2.31
PAAF1Q9BRP4 Y_RNA.659-201ENST00000515994 113 ntBASIC0.61□□□□□ -2.31
PAAF1Q9BRP4 RNA5SP121-201ENST00000516537 101 ntBASIC0.61□□□□□ -2.31
PAAF1Q9BRP4 AC018659.1-201ENST00000551083 169 ntBASIC0.61□□□□□ -2.31
PAAF1Q9BRP4 MIR548AI-201ENST00000579940 88 ntBASIC0.61□□□□□ -2.31
PAAF1Q9BRP4 MIR4639-201ENST00000584938 69 ntBASIC0.61□□□□□ -2.31
PAAF1Q9BRP4 RNA5SP347-201ENST00000362445 119 ntBASIC0.6□□□□□ -2.31
PAAF1Q9BRP4 SNORD115-24-201ENST00000363528 82 ntBASIC0.6□□□□□ -2.31
PAAF1Q9BRP4 Y_RNA.247-201ENST00000364500 92 ntBASIC0.6□□□□□ -2.31
PAAF1Q9BRP4 MIR577-201ENST00000385196 96 ntBASIC0.6□□□□□ -2.31
PAAF1Q9BRP4 SNORD63B-201ENST00000411005 70 ntBASIC0.6□□□□□ -2.31
PAAF1Q9BRP4 SNRPGP12-201ENST00000449481 213 ntBASIC0.6□□□□□ -2.31
PAAF1Q9BRP4 RNU4-54P-201ENST00000516428 129 ntBASIC0.6□□□□□ -2.31
PAAF1Q9BRP4 RNU6-229P-201ENST00000516614 102 ntBASIC0.6□□□□□ -2.31
PAAF1Q9BRP4 AC141557.1-201ENST00000540982 400 ntBASIC0.6□□□□□ -2.31
PAAF1Q9BRP4 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
PAAF1Q9BRP4 RNY3P2-201ENST00000362918 102 ntBASIC0.59□□□□□ -2.31
PAAF1Q9BRP4 RNU6-1014P-201ENST00000383940 103 ntBASIC0.59□□□□□ -2.31
PAAF1Q9BRP4 MIR599-201ENST00000385069 95 ntBASIC0.59□□□□□ -2.31
PAAF1Q9BRP4 MIR548L-201ENST00000408303 86 ntBASIC0.59□□□□□ -2.31
PAAF1Q9BRP4 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.59□□□□□ -2.31
PAAF1Q9BRP4 Y_RNA.809-201ENST00000516058 95 ntBASIC0.59□□□□□ -2.31
PAAF1Q9BRP4 RNU6-1006P-201ENST00000516998 103 ntBASIC0.59□□□□□ -2.31
PAAF1Q9BRP4 AC244669.1-204ENST00000621564 178 ntBASIC0.59□□□□□ -2.31
PAAF1Q9BRP4 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.58□□□□□ -2.32
PAAF1Q9BRP4 RNU6-832P-201ENST00000363319 107 ntBASIC0.58□□□□□ -2.32
PAAF1Q9BRP4 RNU4-36P-201ENST00000364294 144 ntBASIC0.58□□□□□ -2.32
PAAF1Q9BRP4 RNA5SP517-201ENST00000364724 117 ntBASIC0.58□□□□□ -2.32
PAAF1Q9BRP4 Y_RNA.377-201ENST00000365644 108 ntBASIC0.58□□□□□ -2.32
PAAF1Q9BRP4 SNORD28-201ENST00000384706 75 ntBASIC0.58□□□□□ -2.32
PAAF1Q9BRP4 AC097635.1-201ENST00000450678 155 ntBASIC0.58□□□□□ -2.32
PAAF1Q9BRP4 AC244505.6-201ENST00000452829 130 ntBASIC0.58□□□□□ -2.32
PAAF1Q9BRP4 RNU7-195P-201ENST00000458793 62 ntBASIC0.58□□□□□ -2.32
PAAF1Q9BRP4 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.58□□□□□ -2.32
PAAF1Q9BRP4 Y_RNA.57-201ENST00000362806 113 ntBASIC0.57□□□□□ -2.32
PAAF1Q9BRP4 Y_RNA.205-201ENST00000364128 113 ntBASIC0.57□□□□□ -2.32
PAAF1Q9BRP4 Y_RNA.221-201ENST00000364248 96 ntBASIC0.57□□□□□ -2.32
PAAF1Q9BRP4 Y_RNA.273-201ENST00000364703 102 ntBASIC0.57□□□□□ -2.32
PAAF1Q9BRP4 Y_RNA.323-201ENST00000365157 109 ntBASIC0.57□□□□□ -2.32
PAAF1Q9BRP4 SNORA40.8-201ENST00000411034 126 ntBASIC0.57□□□□□ -2.32
PAAF1Q9BRP4 RNA5SP227-201ENST00000516184 113 ntBASIC0.57□□□□□ -2.32
PAAF1Q9BRP4 AC243829.3-201ENST00000622177 108 ntBASIC0.57□□□□□ -2.32
PAAF1Q9BRP4 Y_RNA.10-201ENST00000362371 110 ntBASIC0.56□□□□□ -2.32
PAAF1Q9BRP4 MIR516A2-201ENST00000384888 90 ntBASIC0.56□□□□□ -2.32
PAAF1Q9BRP4 MIR516A1-201ENST00000385033 90 ntBASIC0.56□□□□□ -2.32
PAAF1Q9BRP4 MIR92A1-201ENST00000385233 78 ntBASIC0.56□□□□□ -2.32
PAAF1Q9BRP4 MIR1302-5-201ENST00000408164 150 ntBASIC0.56□□□□□ -2.32
PAAF1Q9BRP4 RNA5SP268-201ENST00000516828 124 ntBASIC0.56□□□□□ -2.32
PAAF1Q9BRP4 SCARNA16.5-201ENST00000517114 183 ntBASIC0.56□□□□□ -2.32
PAAF1Q9BRP4 RNA5SP47-201ENST00000517230 109 ntBASIC0.56□□□□□ -2.32
PAAF1Q9BRP4 RNU6-1099P-201ENST00000363533 107 ntBASIC0.55□□□□□ -2.32
PAAF1Q9BRP4 SNORA8.2-201ENST00000384372 139 ntBASIC0.55□□□□□ -2.32
PAAF1Q9BRP4 RNU6-243P-201ENST00000391140 107 ntBASIC0.55□□□□□ -2.32
PAAF1Q9BRP4 RNU7-104P-201ENST00000459398 79 ntBASIC0.55□□□□□ -2.32
PAAF1Q9BRP4 SNORA25.18-201ENST00000607153 114 ntBASIC0.55□□□□□ -2.32
PAAF1Q9BRP4 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.55□□□□□ -2.32
PAAF1Q9BRP4 AC091304.10-201ENST00000641554 121 ntBASIC0.55□□□□□ -2.32
PAAF1Q9BRP4 Y_RNA.163-201ENST00000363702 113 ntBASIC0.54□□□□□ -2.32
PAAF1Q9BRP4 SNORD45B-201ENST00000364617 72 ntBASIC0.54□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 572.3 ms