Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 RNU6-1081P-201ENST00000384537 107 ntBASIC0.66□□□□□ -2.3
PAAF1Q9BRP4 Y_RNA.567-201ENST00000384736 106 ntBASIC0.66□□□□□ -2.3
PAAF1Q9BRP4 MIR548I2-201ENST00000408348 149 ntBASIC0.66□□□□□ -2.3
PAAF1Q9BRP4 RNA5SP193-201ENST00000410353 107 ntBASIC0.66□□□□□ -2.3
PAAF1Q9BRP4 AC098934.3-201ENST00000430450 190 ntBASIC0.66□□□□□ -2.3
PAAF1Q9BRP4 RNU6-406P-201ENST00000516470 107 ntBASIC0.66□□□□□ -2.3
PAAF1Q9BRP4 RNU6-90P-201ENST00000606352 106 ntBASIC0.66□□□□□ -2.3
PAAF1Q9BRP4 SNORD38.1-201ENST00000363863 68 ntBASIC0.65□□□□□ -2.31
PAAF1Q9BRP4 RNA5SP245-201ENST00000364239 121 ntBASIC0.65□□□□□ -2.31
PAAF1Q9BRP4 SNORD113-1-201ENST00000365321 69 ntBASIC0.65□□□□□ -2.31
PAAF1Q9BRP4 RNU6-571P-201ENST00000384128 107 ntBASIC0.65□□□□□ -2.31
PAAF1Q9BRP4 MIR5009-201ENST00000578736 100 ntBASIC0.65□□□□□ -2.31
PAAF1Q9BRP4 AL442128.1-201ENST00000615151 90 ntBASIC0.65□□□□□ -2.31
PAAF1Q9BRP4 AC092634.7-201ENST00000621022 103 ntBASIC0.65□□□□□ -2.31
PAAF1Q9BRP4 U2.22-201ENST00000636441 106 ntBASIC0.65□□□□□ -2.31
PAAF1Q9BRP4 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.64□□□□□ -2.31
PAAF1Q9BRP4 HSBP1P2-201ENST00000299671 229 ntBASIC0.64□□□□□ -2.31
PAAF1Q9BRP4 AC092628.1-201ENST00000436250 252 ntBASIC0.64□□□□□ -2.31
PAAF1Q9BRP4 RNA5SP94-201ENST00000516917 108 ntBASIC0.64□□□□□ -2.31
PAAF1Q9BRP4 MIR6779-201ENST00000617283 64 ntBASIC0.64□□□□□ -2.31
PAAF1Q9BRP4 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.64□□□□□ -2.31
PAAF1Q9BRP4 RNU6-834P-201ENST00000362367 110 ntBASIC0.63□□□□□ -2.31
PAAF1Q9BRP4 Y_RNA.281-201ENST00000364774 94 ntBASIC0.63□□□□□ -2.31
PAAF1Q9BRP4 RNU6-1201P-201ENST00000384227 107 ntBASIC0.63□□□□□ -2.31
PAAF1Q9BRP4 MIR216A-201ENST00000385063 110 ntBASIC0.63□□□□□ -2.31
PAAF1Q9BRP4 MIR548G-201ENST00000408442 89 ntBASIC0.63□□□□□ -2.31
PAAF1Q9BRP4 RNU6-850P-201ENST00000516934 103 ntBASIC0.63□□□□□ -2.31
PAAF1Q9BRP4 RN7SL793P-201ENST00000583259 296 ntBASIC0.63□□□□□ -2.31
PAAF1Q9BRP4 Y_RNA.36-201ENST00000362602 112 ntBASIC0.62□□□□□ -2.31
PAAF1Q9BRP4 RNU6-170P-201ENST00000362832 104 ntBASIC0.62□□□□□ -2.31
PAAF1Q9BRP4 SNORD18A-201ENST00000363753 72 ntBASIC0.62□□□□□ -2.31
PAAF1Q9BRP4 RNU6-1107P-201ENST00000364817 104 ntBASIC0.62□□□□□ -2.31
PAAF1Q9BRP4 RNY1P4-201ENST00000384595 115 ntBASIC0.62□□□□□ -2.31
PAAF1Q9BRP4 TRAJ51-201ENST00000504127 63 ntBASIC0.62□□□□□ -2.31
PAAF1Q9BRP4 MIR4711-201ENST00000578274 70 ntBASIC0.62□□□□□ -2.31
PAAF1Q9BRP4 MIR4694-201ENST00000578534 80 ntBASIC0.62□□□□□ -2.31
PAAF1Q9BRP4 MIR6129-201ENST00000616087 109 ntBASIC0.62□□□□□ -2.31
PAAF1Q9BRP4 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC0.62□□□□□ -2.31
PAAF1Q9BRP4 Y_RNA.342-201ENST00000365352 113 ntBASIC0.61□□□□□ -2.31
PAAF1Q9BRP4 RNU6-945P-201ENST00000383947 107 ntBASIC0.61□□□□□ -2.31
PAAF1Q9BRP4 SNORD71-201ENST00000411292 86 ntBASIC0.61□□□□□ -2.31
PAAF1Q9BRP4 AL353813.1-201ENST00000440700 253 ntBASIC0.61□□□□□ -2.31
PAAF1Q9BRP4 Y_RNA.659-201ENST00000515994 113 ntBASIC0.61□□□□□ -2.31
PAAF1Q9BRP4 RNA5SP121-201ENST00000516537 101 ntBASIC0.61□□□□□ -2.31
PAAF1Q9BRP4 AC018659.1-201ENST00000551083 169 ntBASIC0.61□□□□□ -2.31
PAAF1Q9BRP4 MIR548AI-201ENST00000579940 88 ntBASIC0.61□□□□□ -2.31
PAAF1Q9BRP4 MIR4639-201ENST00000584938 69 ntBASIC0.61□□□□□ -2.31
PAAF1Q9BRP4 RNA5SP347-201ENST00000362445 119 ntBASIC0.6□□□□□ -2.31
PAAF1Q9BRP4 SNORD115-24-201ENST00000363528 82 ntBASIC0.6□□□□□ -2.31
PAAF1Q9BRP4 Y_RNA.247-201ENST00000364500 92 ntBASIC0.6□□□□□ -2.31
PAAF1Q9BRP4 MIR577-201ENST00000385196 96 ntBASIC0.6□□□□□ -2.31
PAAF1Q9BRP4 SNORD63B-201ENST00000411005 70 ntBASIC0.6□□□□□ -2.31
PAAF1Q9BRP4 SNRPGP12-201ENST00000449481 213 ntBASIC0.6□□□□□ -2.31
PAAF1Q9BRP4 RNU4-54P-201ENST00000516428 129 ntBASIC0.6□□□□□ -2.31
PAAF1Q9BRP4 RNU6-229P-201ENST00000516614 102 ntBASIC0.6□□□□□ -2.31
PAAF1Q9BRP4 AC141557.1-201ENST00000540982 400 ntBASIC0.6□□□□□ -2.31
PAAF1Q9BRP4 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
PAAF1Q9BRP4 RNY3P2-201ENST00000362918 102 ntBASIC0.59□□□□□ -2.31
PAAF1Q9BRP4 RNU6-1014P-201ENST00000383940 103 ntBASIC0.59□□□□□ -2.31
PAAF1Q9BRP4 MIR599-201ENST00000385069 95 ntBASIC0.59□□□□□ -2.31
PAAF1Q9BRP4 MIR548L-201ENST00000408303 86 ntBASIC0.59□□□□□ -2.31
PAAF1Q9BRP4 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.59□□□□□ -2.31
PAAF1Q9BRP4 Y_RNA.809-201ENST00000516058 95 ntBASIC0.59□□□□□ -2.31
PAAF1Q9BRP4 RNU6-1006P-201ENST00000516998 103 ntBASIC0.59□□□□□ -2.31
PAAF1Q9BRP4 AC244669.1-204ENST00000621564 178 ntBASIC0.59□□□□□ -2.31
PAAF1Q9BRP4 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.58□□□□□ -2.32
PAAF1Q9BRP4 RNU6-832P-201ENST00000363319 107 ntBASIC0.58□□□□□ -2.32
PAAF1Q9BRP4 RNU4-36P-201ENST00000364294 144 ntBASIC0.58□□□□□ -2.32
PAAF1Q9BRP4 RNA5SP517-201ENST00000364724 117 ntBASIC0.58□□□□□ -2.32
PAAF1Q9BRP4 Y_RNA.377-201ENST00000365644 108 ntBASIC0.58□□□□□ -2.32
PAAF1Q9BRP4 SNORD28-201ENST00000384706 75 ntBASIC0.58□□□□□ -2.32
PAAF1Q9BRP4 AC097635.1-201ENST00000450678 155 ntBASIC0.58□□□□□ -2.32
PAAF1Q9BRP4 AC244505.6-201ENST00000452829 130 ntBASIC0.58□□□□□ -2.32
PAAF1Q9BRP4 RNU7-195P-201ENST00000458793 62 ntBASIC0.58□□□□□ -2.32
PAAF1Q9BRP4 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.58□□□□□ -2.32
PAAF1Q9BRP4 Y_RNA.57-201ENST00000362806 113 ntBASIC0.57□□□□□ -2.32
PAAF1Q9BRP4 Y_RNA.205-201ENST00000364128 113 ntBASIC0.57□□□□□ -2.32
PAAF1Q9BRP4 Y_RNA.221-201ENST00000364248 96 ntBASIC0.57□□□□□ -2.32
PAAF1Q9BRP4 Y_RNA.273-201ENST00000364703 102 ntBASIC0.57□□□□□ -2.32
PAAF1Q9BRP4 Y_RNA.323-201ENST00000365157 109 ntBASIC0.57□□□□□ -2.32
PAAF1Q9BRP4 SNORA40.8-201ENST00000411034 126 ntBASIC0.57□□□□□ -2.32
PAAF1Q9BRP4 RNA5SP227-201ENST00000516184 113 ntBASIC0.57□□□□□ -2.32
PAAF1Q9BRP4 AC243829.3-201ENST00000622177 108 ntBASIC0.57□□□□□ -2.32
PAAF1Q9BRP4 Y_RNA.10-201ENST00000362371 110 ntBASIC0.56□□□□□ -2.32
PAAF1Q9BRP4 MIR516A2-201ENST00000384888 90 ntBASIC0.56□□□□□ -2.32
PAAF1Q9BRP4 MIR516A1-201ENST00000385033 90 ntBASIC0.56□□□□□ -2.32
PAAF1Q9BRP4 MIR92A1-201ENST00000385233 78 ntBASIC0.56□□□□□ -2.32
PAAF1Q9BRP4 MIR1302-5-201ENST00000408164 150 ntBASIC0.56□□□□□ -2.32
PAAF1Q9BRP4 RNA5SP268-201ENST00000516828 124 ntBASIC0.56□□□□□ -2.32
PAAF1Q9BRP4 SCARNA16.5-201ENST00000517114 183 ntBASIC0.56□□□□□ -2.32
PAAF1Q9BRP4 RNA5SP47-201ENST00000517230 109 ntBASIC0.56□□□□□ -2.32
PAAF1Q9BRP4 RNU6-1099P-201ENST00000363533 107 ntBASIC0.55□□□□□ -2.32
PAAF1Q9BRP4 SNORA8.2-201ENST00000384372 139 ntBASIC0.55□□□□□ -2.32
PAAF1Q9BRP4 RNU6-243P-201ENST00000391140 107 ntBASIC0.55□□□□□ -2.32
PAAF1Q9BRP4 RNU7-104P-201ENST00000459398 79 ntBASIC0.55□□□□□ -2.32
PAAF1Q9BRP4 SNORA25.18-201ENST00000607153 114 ntBASIC0.55□□□□□ -2.32
PAAF1Q9BRP4 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.55□□□□□ -2.32
PAAF1Q9BRP4 AC091304.10-201ENST00000641554 121 ntBASIC0.55□□□□□ -2.32
PAAF1Q9BRP4 Y_RNA.163-201ENST00000363702 113 ntBASIC0.54□□□□□ -2.32
PAAF1Q9BRP4 SNORD45B-201ENST00000364617 72 ntBASIC0.54□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 168 ms