Protein–RNA interactions for Protein: Q9BRG2

SH2D3A, SH2 domain-containing protein 3A, humanhuman

Predictions only

Length 576 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3AQ9BRG2 RNU7-185P-201ENST00000459215 60 ntBASIC1.17□□□□□ -2.22
SH2D3AQ9BRG2 RNA5SP480-201ENST00000516840 109 ntBASIC1.17□□□□□ -2.22
SH2D3AQ9BRG2 MIR4771-2-201ENST00000577758 74 ntBASIC1.17□□□□□ -2.22
SH2D3AQ9BRG2 MIR4771-1-201ENST00000582617 74 ntBASIC1.17□□□□□ -2.22
SH2D3AQ9BRG2 RNU6-1125P-201ENST00000363601 107 ntBASIC1.16□□□□□ -2.22
SH2D3AQ9BRG2 RNU6-219P-201ENST00000364728 107 ntBASIC1.16□□□□□ -2.22
SH2D3AQ9BRG2 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
SH2D3AQ9BRG2 RNU6-573P-201ENST00000383938 106 ntBASIC1.16□□□□□ -2.22
SH2D3AQ9BRG2 RNU6-480P-201ENST00000384332 107 ntBASIC1.16□□□□□ -2.22
SH2D3AQ9BRG2 RNU6-402P-201ENST00000410678 103 ntBASIC1.16□□□□□ -2.22
SH2D3AQ9BRG2 RNU6-850P-201ENST00000516934 103 ntBASIC1.16□□□□□ -2.22
SH2D3AQ9BRG2 SNORA70.22-201ENST00000517160 124 ntBASIC1.16□□□□□ -2.22
SH2D3AQ9BRG2 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.16□□□□□ -2.22
SH2D3AQ9BRG2 MIR8066-201ENST00000617280 78 ntBASIC1.16□□□□□ -2.22
SH2D3AQ9BRG2 RNA5SP327-201ENST00000362494 101 ntBASIC1.15□□□□□ -2.23
SH2D3AQ9BRG2 RNA5SP173-201ENST00000364857 136 ntBASIC1.15□□□□□ -2.23
SH2D3AQ9BRG2 RNU7-90P-201ENST00000459216 62 ntBASIC1.15□□□□□ -2.23
SH2D3AQ9BRG2 RNU6-765P-201ENST00000516916 99 ntBASIC1.15□□□□□ -2.23
SH2D3AQ9BRG2 AL513043.2-201ENST00000573941 143 ntBASIC1.15□□□□□ -2.23
SH2D3AQ9BRG2 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
SH2D3AQ9BRG2 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
SH2D3AQ9BRG2 Y_RNA.13-201ENST00000362403 112 ntBASIC1.14□□□□□ -2.23
SH2D3AQ9BRG2 Y_RNA.42-201ENST00000362660 108 ntBASIC1.14□□□□□ -2.23
SH2D3AQ9BRG2 SNORA25.8-201ENST00000364831 128 ntBASIC1.14□□□□□ -2.23
SH2D3AQ9BRG2 RNU6-934P-201ENST00000365154 107 ntBASIC1.14□□□□□ -2.23
SH2D3AQ9BRG2 RNY1P4-201ENST00000384595 115 ntBASIC1.14□□□□□ -2.23
SH2D3AQ9BRG2 MIR125B2-201ENST00000385128 89 ntBASIC1.14□□□□□ -2.23
SH2D3AQ9BRG2 MIR519A1-201ENST00000385257 85 ntBASIC1.14□□□□□ -2.23
SH2D3AQ9BRG2 SNORA26.2-201ENST00000390922 122 ntBASIC1.14□□□□□ -2.23
SH2D3AQ9BRG2 Y_RNA.620-201ENST00000411009 88 ntBASIC1.14□□□□□ -2.23
SH2D3AQ9BRG2 RPS26P5-201ENST00000418544 335 ntBASIC1.14□□□□□ -2.23
SH2D3AQ9BRG2 RN7SKP12-201ENST00000516275 143 ntBASIC1.14□□□□□ -2.23
SH2D3AQ9BRG2 snoMBII-202.2-201ENST00000517263 86 ntBASIC1.14□□□□□ -2.23
SH2D3AQ9BRG2 AC013244.2-201ENST00000603396 103 ntBASIC1.14□□□□□ -2.23
SH2D3AQ9BRG2 RNU4-58P-201ENST00000363192 141 ntBASIC1.13□□□□□ -2.23
SH2D3AQ9BRG2 SNORD115-27-201ENST00000364430 82 ntBASIC1.13□□□□□ -2.23
SH2D3AQ9BRG2 RNU1-93P-201ENST00000364704 169 ntBASIC1.13□□□□□ -2.23
SH2D3AQ9BRG2 SNORA25-201ENST00000384384 134 ntBASIC1.13□□□□□ -2.23
SH2D3AQ9BRG2 SNORD116-22-201ENST00000384430 92 ntBASIC1.13□□□□□ -2.23
SH2D3AQ9BRG2 Y_RNA.609-201ENST00000410669 89 ntBASIC1.13□□□□□ -2.23
SH2D3AQ9BRG2 AL161932.1-201ENST00000437408 146 ntBASIC1.13□□□□□ -2.23
SH2D3AQ9BRG2 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.13□□□□□ -2.23
SH2D3AQ9BRG2 MIR6082-201ENST00000613604 109 ntBASIC1.13□□□□□ -2.23
SH2D3AQ9BRG2 MIR6515-201ENST00000619843 57 ntBASIC1.13□□□□□ -2.23
SH2D3AQ9BRG2 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
SH2D3AQ9BRG2 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
SH2D3AQ9BRG2 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.12□□□□□ -2.23
SH2D3AQ9BRG2 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
SH2D3AQ9BRG2 MIR520E-201ENST00000384867 87 ntBASIC1.12□□□□□ -2.23
SH2D3AQ9BRG2 MIR4668-201ENST00000582284 70 ntBASIC1.12□□□□□ -2.23
SH2D3AQ9BRG2 SNORD92-201ENST00000585078 85 ntBASIC1.12□□□□□ -2.23
SH2D3AQ9BRG2 AC008608.1-201ENST00000603910 127 ntBASIC1.12□□□□□ -2.23
SH2D3AQ9BRG2 AC027335.2-201ENST00000624030 375 ntBASIC1.12□□□□□ -2.23
SH2D3AQ9BRG2 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.11□□□□□ -2.23
SH2D3AQ9BRG2 SNORD36A-201ENST00000362874 73 ntBASIC1.11□□□□□ -2.23
SH2D3AQ9BRG2 RNU4-38P-201ENST00000364472 129 ntBASIC1.11□□□□□ -2.23
SH2D3AQ9BRG2 MIR516A2-201ENST00000384888 90 ntBASIC1.11□□□□□ -2.23
SH2D3AQ9BRG2 MIR222-201ENST00000384992 110 ntBASIC1.11□□□□□ -2.23
SH2D3AQ9BRG2 MIR516A1-201ENST00000385033 90 ntBASIC1.11□□□□□ -2.23
SH2D3AQ9BRG2 MIR1257-201ENST00000408490 117 ntBASIC1.11□□□□□ -2.23
SH2D3AQ9BRG2 RNU7-106P-201ENST00000459514 67 ntBASIC1.11□□□□□ -2.23
SH2D3AQ9BRG2 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.11□□□□□ -2.23
SH2D3AQ9BRG2 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.11□□□□□ -2.23
SH2D3AQ9BRG2 RNU6-633P-201ENST00000362612 103 ntBASIC1.1□□□□□ -2.23
SH2D3AQ9BRG2 Y_RNA.56-201ENST00000362798 112 ntBASIC1.1□□□□□ -2.23
SH2D3AQ9BRG2 Y_RNA.57-201ENST00000362806 113 ntBASIC1.1□□□□□ -2.23
SH2D3AQ9BRG2 MIR19B1-201ENST00000384829 87 ntBASIC1.1□□□□□ -2.23
SH2D3AQ9BRG2 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
SH2D3AQ9BRG2 AC002429.1-201ENST00000437672 148 ntBASIC1.1□□□□□ -2.23
SH2D3AQ9BRG2 snoU13.11-201ENST00000459219 104 ntBASIC1.1□□□□□ -2.23
SH2D3AQ9BRG2 RPS29P1-201ENST00000465274 159 ntBASIC1.1□□□□□ -2.23
SH2D3AQ9BRG2 MIR4676-201ENST00000583078 72 ntBASIC1.1□□□□□ -2.23
SH2D3AQ9BRG2 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
SH2D3AQ9BRG2 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
SH2D3AQ9BRG2 RNA5SP245-201ENST00000364239 121 ntBASIC1.09□□□□□ -2.23
SH2D3AQ9BRG2 SNORD100-201ENST00000408573 76 ntBASIC1.09□□□□□ -2.23
SH2D3AQ9BRG2 Y_RNA.648-201ENST00000459455 110 ntBASIC1.09□□□□□ -2.23
SH2D3AQ9BRG2 AC022137.1-201ENST00000483735 151 ntBASIC1.09□□□□□ -2.23
SH2D3AQ9BRG2 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.09□□□□□ -2.23
SH2D3AQ9BRG2 AC019288.1-201ENST00000557918 224 ntBASIC1.09□□□□□ -2.23
SH2D3AQ9BRG2 MIR3973-201ENST00000579824 107 ntBASIC1.09□□□□□ -2.23
SH2D3AQ9BRG2 MIR151B-201ENST00000584249 96 ntBASIC1.09□□□□□ -2.23
SH2D3AQ9BRG2 AC022709.1-201ENST00000615967 87 ntBASIC1.09□□□□□ -2.23
SH2D3AQ9BRG2 MIR1245B-201ENST00000636115 69 ntBASIC1.09□□□□□ -2.23
SH2D3AQ9BRG2 MIR373-201ENST00000362273 69 ntBASIC1.08□□□□□ -2.24
SH2D3AQ9BRG2 RNU6-979P-201ENST00000383896 107 ntBASIC1.08□□□□□ -2.24
SH2D3AQ9BRG2 Y_RNA.540-201ENST00000384638 111 ntBASIC1.08□□□□□ -2.24
SH2D3AQ9BRG2 MIR1827-201ENST00000408549 66 ntBASIC1.08□□□□□ -2.24
SH2D3AQ9BRG2 RNU6-994P-201ENST00000410507 111 ntBASIC1.08□□□□□ -2.24
SH2D3AQ9BRG2 AL606490.4-201ENST00000423117 127 ntBASIC1.08□□□□□ -2.24
SH2D3AQ9BRG2 RNU7-56P-201ENST00000458744 62 ntBASIC1.08□□□□□ -2.24
SH2D3AQ9BRG2 TRAJ51-201ENST00000504127 63 ntBASIC1.08□□□□□ -2.24
SH2D3AQ9BRG2 MIR4698-201ENST00000577795 80 ntBASIC1.08□□□□□ -2.24
SH2D3AQ9BRG2 MIR4804-201ENST00000581683 73 ntBASIC1.08□□□□□ -2.24
SH2D3AQ9BRG2 RNU6-1335P-201ENST00000365426 107 ntBASIC1.07□□□□□ -2.24
SH2D3AQ9BRG2 RNU6-1254P-201ENST00000391266 104 ntBASIC1.07□□□□□ -2.24
SH2D3AQ9BRG2 RNU7-85P-201ENST00000458851 63 ntBASIC1.07□□□□□ -2.24
SH2D3AQ9BRG2 SNORD4B-201ENST00000459083 72 ntBASIC1.07□□□□□ -2.24
SH2D3AQ9BRG2 RNU6-1223P-201ENST00000517124 104 ntBASIC1.07□□□□□ -2.24
SH2D3AQ9BRG2 RNU7-156P-201ENST00000517214 74 ntBASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 168.1 ms