Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 7SK.8-201ENST00000612110 250 ntBASIC2.34□□□□□ -2.03
PHOX2BQ99453 AC106800.4-201ENST00000614905 153 ntBASIC2.34□□□□□ -2.03
PHOX2BQ99453 7SK.11-201ENST00000615477 250 ntBASIC2.34□□□□□ -2.03
PHOX2BQ99453 7SK.13-201ENST00000622040 250 ntBASIC2.34□□□□□ -2.03
PHOX2BQ99453 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
PHOX2BQ99453 MIR144-201ENST00000384886 86 ntBASIC2.33□□□□□ -2.04
PHOX2BQ99453 Y_RNA.596-201ENST00000410462 109 ntBASIC2.33□□□□□ -2.04
PHOX2BQ99453 RPS26P5-201ENST00000418544 335 ntBASIC2.33□□□□□ -2.04
PHOX2BQ99453 RNU7-156P-201ENST00000517214 74 ntBASIC2.33□□□□□ -2.04
PHOX2BQ99453 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.33□□□□□ -2.04
PHOX2BQ99453 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
PHOX2BQ99453 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
PHOX2BQ99453 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
PHOX2BQ99453 RNU6-364P-201ENST00000384387 107 ntBASIC2.32□□□□□ -2.04
PHOX2BQ99453 MTRNR2L2-201ENST00000604882 87 ntBASIC2.32□□□□□ -2.04
PHOX2BQ99453 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
PHOX2BQ99453 MIR599-201ENST00000385069 95 ntBASIC2.31□□□□□ -2.04
PHOX2BQ99453 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC2.31□□□□□ -2.04
PHOX2BQ99453 snoU13.21-201ENST00000459368 105 ntBASIC2.31□□□□□ -2.04
PHOX2BQ99453 AC048334.1-201ENST00000477975 159 ntBASIC2.31□□□□□ -2.04
PHOX2BQ99453 AC008834.1-201ENST00000511612 175 ntBASIC2.31□□□□□ -2.04
PHOX2BQ99453 MIR4696-201ENST00000581431 70 ntBASIC2.31□□□□□ -2.04
PHOX2BQ99453 MIR1291-201ENST00000627649 87 ntBASIC2.31□□□□□ -2.04
PHOX2BQ99453 SNORA80D-201ENST00000384488 135 ntBASIC2.3□□□□□ -2.04
PHOX2BQ99453 MIR938-201ENST00000401216 83 ntBASIC2.3□□□□□ -2.04
PHOX2BQ99453 RNA5SP82-201ENST00000516707 92 ntBASIC2.3□□□□□ -2.04
PHOX2BQ99453 MIR5694-201ENST00000581190 76 ntBASIC2.3□□□□□ -2.04
PHOX2BQ99453 MIR4484-201ENST00000582855 83 ntBASIC2.3□□□□□ -2.04
PHOX2BQ99453 MIR6895-201ENST00000613497 78 ntBASIC2.3□□□□□ -2.04
PHOX2BQ99453 MIR219B-201ENST00000637023 88 ntBASIC2.3□□□□□ -2.04
PHOX2BQ99453 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
PHOX2BQ99453 HMGN2P19-201ENST00000425149 265 ntBASIC2.29□□□□□ -2.04
PHOX2BQ99453 SNORA31.2-201ENST00000516019 134 ntBASIC2.29□□□□□ -2.04
PHOX2BQ99453 RNU6-1015P-201ENST00000517121 99 ntBASIC2.29□□□□□ -2.04
PHOX2BQ99453 MIR5092-201ENST00000583139 88 ntBASIC2.29□□□□□ -2.04
PHOX2BQ99453 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
PHOX2BQ99453 Y_RNA.207-201ENST00000364142 106 ntBASIC2.28□□□□□ -2.04
PHOX2BQ99453 RNU6-535P-201ENST00000384722 107 ntBASIC2.28□□□□□ -2.04
PHOX2BQ99453 RNU6-935P-201ENST00000410371 100 ntBASIC2.28□□□□□ -2.04
PHOX2BQ99453 AL356379.1-201ENST00000414105 126 ntBASIC2.28□□□□□ -2.04
PHOX2BQ99453 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.28□□□□□ -2.04
PHOX2BQ99453 MIR4676-201ENST00000583078 72 ntBASIC2.28□□□□□ -2.04
PHOX2BQ99453 AL645939.4-201ENST00000604495 135 ntBASIC2.28□□□□□ -2.04
PHOX2BQ99453 DLEU2_3.1-201ENST00000620005 73 ntBASIC2.28□□□□□ -2.04
PHOX2BQ99453 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.28□□□□□ -2.04
PHOX2BQ99453 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
PHOX2BQ99453 Y_RNA.532-201ENST00000384590 113 ntBASIC2.27□□□□□ -2.05
PHOX2BQ99453 SNORA75.2-201ENST00000391138 150 ntBASIC2.27□□□□□ -2.05
PHOX2BQ99453 SNORA75.3-201ENST00000391231 150 ntBASIC2.27□□□□□ -2.05
PHOX2BQ99453 RNU6-587P-201ENST00000391282 106 ntBASIC2.27□□□□□ -2.05
PHOX2BQ99453 AP1B1P2-201ENST00000416196 106 ntBASIC2.27□□□□□ -2.05
PHOX2BQ99453 RNU6-634P-201ENST00000459134 106 ntBASIC2.27□□□□□ -2.05
PHOX2BQ99453 RNU7-90P-201ENST00000459216 62 ntBASIC2.27□□□□□ -2.05
PHOX2BQ99453 RNU6-1057P-201ENST00000517162 102 ntBASIC2.27□□□□□ -2.05
PHOX2BQ99453 AL096840.1-201ENST00000603287 93 ntBASIC2.27□□□□□ -2.05
PHOX2BQ99453 AC027335.2-201ENST00000624030 375 ntBASIC2.27□□□□□ -2.05
PHOX2BQ99453 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
PHOX2BQ99453 Y_RNA.36-201ENST00000362602 112 ntBASIC2.26□□□□□ -2.05
PHOX2BQ99453 RNU4-62P-201ENST00000410125 130 ntBASIC2.26□□□□□ -2.05
PHOX2BQ99453 RNU2-59P-201ENST00000410482 191 ntBASIC2.26□□□□□ -2.05
PHOX2BQ99453 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.26□□□□□ -2.05
PHOX2BQ99453 BX248123.2-201ENST00000606318 124 ntBASIC2.26□□□□□ -2.05
PHOX2BQ99453 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.26□□□□□ -2.05
PHOX2BQ99453 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
PHOX2BQ99453 MIR21-201ENST00000362134 72 ntBASIC2.25□□□□□ -2.05
PHOX2BQ99453 SNORD114-26-201ENST00000363543 72 ntBASIC2.25□□□□□ -2.05
PHOX2BQ99453 RNA5SP456-201ENST00000364002 114 ntBASIC2.25□□□□□ -2.05
PHOX2BQ99453 RNU6-340P-201ENST00000364005 107 ntBASIC2.25□□□□□ -2.05
PHOX2BQ99453 SNORD115-44-201ENST00000365391 82 ntBASIC2.25□□□□□ -2.05
PHOX2BQ99453 SNORA8.1-201ENST00000384250 140 ntBASIC2.25□□□□□ -2.05
PHOX2BQ99453 MIR583-201ENST00000384846 75 ntBASIC2.25□□□□□ -2.05
PHOX2BQ99453 MIR221-201ENST00000385135 110 ntBASIC2.25□□□□□ -2.05
PHOX2BQ99453 MIR942-201ENST00000401111 86 ntBASIC2.25□□□□□ -2.05
PHOX2BQ99453 MIR1276-201ENST00000408707 83 ntBASIC2.25□□□□□ -2.05
PHOX2BQ99453 RNU6-994P-201ENST00000410507 111 ntBASIC2.25□□□□□ -2.05
PHOX2BQ99453 RNA5SP489-201ENST00000410986 109 ntBASIC2.25□□□□□ -2.05
PHOX2BQ99453 AL606490.4-201ENST00000423117 127 ntBASIC2.25□□□□□ -2.05
PHOX2BQ99453 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC2.25□□□□□ -2.05
PHOX2BQ99453 RNU7-21P-201ENST00000459430 62 ntBASIC2.25□□□□□ -2.05
PHOX2BQ99453 RNU6-687P-201ENST00000516443 89 ntBASIC2.25□□□□□ -2.05
PHOX2BQ99453 RNU6-902P-201ENST00000517212 91 ntBASIC2.25□□□□□ -2.05
PHOX2BQ99453 AC008608.1-201ENST00000603910 127 ntBASIC2.25□□□□□ -2.05
PHOX2BQ99453 MIR6840-201ENST00000611937 71 ntBASIC2.25□□□□□ -2.05
PHOX2BQ99453 RMST_2.1-201ENST00000617263 136 ntBASIC2.25□□□□□ -2.05
PHOX2BQ99453 U6.100-201ENST00000636230 99 ntBASIC2.25□□□□□ -2.05
PHOX2BQ99453 Y_RNA.606-201ENST00000410579 103 ntBASIC2.24□□□□□ -2.05
PHOX2BQ99453 AC097510.1-201ENST00000510945 133 ntBASIC2.24□□□□□ -2.05
PHOX2BQ99453 RNU6-1265P-201ENST00000516342 103 ntBASIC2.24□□□□□ -2.05
PHOX2BQ99453 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
PHOX2BQ99453 U3.27-201ENST00000391237 200 ntBASIC2.23□□□□□ -2.05
PHOX2BQ99453 MIR934-201ENST00000401241 83 ntBASIC2.23□□□□□ -2.05
PHOX2BQ99453 AC244505.6-201ENST00000452829 130 ntBASIC2.23□□□□□ -2.05
PHOX2BQ99453 SNORD13-201ENST00000459299 104 ntBASIC2.23□□□□□ -2.05
PHOX2BQ99453 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
PHOX2BQ99453 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
PHOX2BQ99453 RNU6-42P-201ENST00000384165 107 ntBASIC2.22□□□□□ -2.05
PHOX2BQ99453 SNORD90-201ENST00000391145 111 ntBASIC2.22□□□□□ -2.05
PHOX2BQ99453 snoU13.17-201ENST00000458802 104 ntBASIC2.22□□□□□ -2.05
PHOX2BQ99453 RNU7-40P-201ENST00000516397 64 ntBASIC2.22□□□□□ -2.05
PHOX2BQ99453 RNU6-291P-201ENST00000384720 107 ntBASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 211.7 ms