Protein–RNA interactions for Protein: Q96RL7

VPS13A, Vacuolar protein sorting-associated protein 13A, humanhuman

Predictions only

Length 3,174 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13AQ96RL7 AC138915.2-201ENST00000569776 97 ntBASIC-4.38□□□□□ -3.11
VPS13AQ96RL7 Y_RNA.120-201ENST00000363304 110 ntBASIC-4.38□□□□□ -3.11
VPS13AQ96RL7 Y_RNA.260-201ENST00000364628 101 ntBASIC-4.38□□□□□ -3.11
VPS13AQ96RL7 SNORD77B-201ENST00000391112 67 ntBASIC-4.38□□□□□ -3.11
VPS13AQ96RL7 Y_RNA.166-201ENST00000363730 102 ntBASIC-4.39□□□□□ -3.11
VPS13AQ96RL7 RNU7-136P-201ENST00000458819 69 ntBASIC-4.39□□□□□ -3.11
VPS13AQ96RL7 Y_RNA.206-201ENST00000364136 102 ntBASIC-4.4□□□□□ -3.11
VPS13AQ96RL7 SNORD116-11-201ENST00000383882 92 ntBASIC-4.4□□□□□ -3.11
VPS13AQ96RL7 RNU6-554P-201ENST00000410466 106 ntBASIC-4.4□□□□□ -3.11
VPS13AQ96RL7 RNU2-31P-201ENST00000516954 155 ntBASIC-4.4□□□□□ -3.11
VPS13AQ96RL7 RNY4P18-201ENST00000391107 89 ntBASIC-4.4□□□□□ -3.11
VPS13AQ96RL7 U6atac.1-201ENST00000616025 117 ntBASIC-4.4□□□□□ -3.11
VPS13AQ96RL7 AC090617.10-201ENST00000624308 134 ntBASIC-4.4□□□□□ -3.11
VPS13AQ96RL7 MIR125B1-201ENST00000385236 88 ntBASIC-4.41□□□□□ -3.11
VPS13AQ96RL7 ELOCP17-201ENST00000414751 326 ntBASIC-4.41□□□□□ -3.11
VPS13AQ96RL7 MTND2P3-201ENST00000452458 470 ntBASIC-4.41□□□□□ -3.11
VPS13AQ96RL7 RNU7-2P-201ENST00000516096 62 ntBASIC-4.41□□□□□ -3.11
VPS13AQ96RL7 AC092747.3-201ENST00000603769 301 ntBASIC-4.41□□□□□ -3.11
VPS13AQ96RL7 SNORD116-16-201ENST00000384533 92 ntBASIC-4.41□□□□□ -3.12
VPS13AQ96RL7 RNU6-788P-201ENST00000390967 104 ntBASIC-4.41□□□□□ -3.12
VPS13AQ96RL7 RNU6-436P-201ENST00000516171 114 ntBASIC-4.42□□□□□ -3.12
VPS13AQ96RL7 RNU2-4P-201ENST00000606190 192 ntBASIC-4.42□□□□□ -3.12
VPS13AQ96RL7 AC073869.6-201ENST00000640656 341 ntBASIC-4.43□□□□□ -3.12
VPS13AQ96RL7 AC115989.2-201ENST00000578640 563 ntBASIC-4.43□□□□□ -3.12
VPS13AQ96RL7 RNU6-387P-201ENST00000411331 105 ntBASIC-4.43□□□□□ -3.12
VPS13AQ96RL7 AL160004.2-201ENST00000432935 350 ntBASIC-4.43□□□□□ -3.12
VPS13AQ96RL7 RNU5F-6P-201ENST00000362979 116 ntBASIC-4.44□□□□□ -3.12
VPS13AQ96RL7 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC-4.44□□□□□ -3.12
VPS13AQ96RL7 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC-4.44□□□□□ -3.12
VPS13AQ96RL7 MTND3P7-201ENST00000474435 343 ntBASIC-4.44□□□□□ -3.12
VPS13AQ96RL7 RNU6-1051P-201ENST00000365471 102 ntBASIC-4.44□□□□□ -3.12
VPS13AQ96RL7 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-4.44□□□□□ -3.12
VPS13AQ96RL7 RNU6-845P-201ENST00000362578 103 ntBASIC-4.45□□□□□ -3.12
VPS13AQ96RL7 RNU6-289P-201ENST00000364093 107 ntBASIC-4.45□□□□□ -3.12
VPS13AQ96RL7 MTND3P2-201ENST00000438452 342 ntBASIC-4.45□□□□□ -3.12
VPS13AQ96RL7 MIR4662B-201ENST00000579498 81 ntBASIC-4.45□□□□□ -3.12
VPS13AQ96RL7 AL365265.1-201ENST00000621045 234 ntBASIC-4.45□□□□□ -3.12
VPS13AQ96RL7 SNORA24B-201ENST00000384176 131 ntBASIC-4.45□□□□□ -3.12
VPS13AQ96RL7 RNU6-587P-201ENST00000391282 106 ntBASIC-4.45□□□□□ -3.12
VPS13AQ96RL7 RNU7-174P-201ENST00000516248 59 ntBASIC-4.46□□□□□ -3.12
VPS13AQ96RL7 U6.106-201ENST00000636360 105 ntBASIC-4.46□□□□□ -3.12
VPS13AQ96RL7 AC002044.1-201ENST00000606707 158 ntBASIC-4.46□□□□□ -3.12
VPS13AQ96RL7 RNU6-1307P-201ENST00000391012 103 ntBASIC-4.47□□□□□ -3.12
VPS13AQ96RL7 Y_RNA.618-201ENST00000410949 107 ntBASIC-4.47□□□□□ -3.12
VPS13AQ96RL7 AF228730.3-201ENST00000436691 102 ntBASIC-4.47□□□□□ -3.13
VPS13AQ96RL7 MIR5692C1-201ENST00000585309 91 ntBASIC-4.47□□□□□ -3.13
VPS13AQ96RL7 RNA5SP224-201ENST00000365069 126 ntBASIC-4.48□□□□□ -3.13
VPS13AQ96RL7 Y_RNA.382-201ENST00000365672 114 ntBASIC-4.48□□□□□ -3.13
VPS13AQ96RL7 MIR521-1-201ENST00000384902 87 ntBASIC-4.49□□□□□ -3.13
VPS13AQ96RL7 AC107308.1-201ENST00000615897 301 ntBASIC-4.49□□□□□ -3.13
VPS13AQ96RL7 RNU2-69P-201ENST00000516061 100 ntBASIC-4.49□□□□□ -3.13
VPS13AQ96RL7 Y_RNA.341-201ENST00000365341 102 ntBASIC-4.49□□□□□ -3.13
VPS13AQ96RL7 RNU2-61P-201ENST00000411069 191 ntBASIC-4.49□□□□□ -3.13
VPS13AQ96RL7 RNU7-160P-201ENST00000516660 62 ntBASIC-4.49□□□□□ -3.13
VPS13AQ96RL7 Y_RNA.335-201ENST00000365299 96 ntBASIC-4.5□□□□□ -3.13
VPS13AQ96RL7 RNU6-1120P-201ENST00000362988 108 ntBASIC-4.51□□□□□ -3.13
VPS13AQ96RL7 Y_RNA.357-201ENST00000365487 109 ntBASIC-4.51□□□□□ -3.13
VPS13AQ96RL7 MIR548U-201ENST00000390728 81 ntBASIC-4.51□□□□□ -3.13
VPS13AQ96RL7 RNU6-1303P-201ENST00000364841 107 ntBASIC-4.51□□□□□ -3.13
VPS13AQ96RL7 Y_RNA.389-201ENST00000383924 113 ntBASIC-4.51□□□□□ -3.13
VPS13AQ96RL7 MTND3P21-201ENST00000433774 331 ntBASIC-4.51□□□□□ -3.13
VPS13AQ96RL7 SNORD45.2-201ENST00000363552 72 ntBASIC-4.51□□□□□ -3.13
VPS13AQ96RL7 RNU6-61P-201ENST00000365528 109 ntBASIC-4.51□□□□□ -3.13
VPS13AQ96RL7 Z82188.1-201ENST00000436709 154 ntBASIC-4.51□□□□□ -3.13
VPS13AQ96RL7 RNU6-157P-201ENST00000383957 107 ntBASIC-4.52□□□□□ -3.13
VPS13AQ96RL7 MIR34C-201ENST00000384831 77 ntBASIC-4.52□□□□□ -3.13
VPS13AQ96RL7 Y_RNA.286-201ENST00000364813 102 ntBASIC-4.52□□□□□ -3.13
VPS13AQ96RL7 RNY1P6-201ENST00000384193 109 ntBASIC-4.53□□□□□ -3.13
VPS13AQ96RL7 Y_RNA.556-201ENST00000384677 113 ntBASIC-4.53□□□□□ -3.13
VPS13AQ96RL7 RNU6-82P-201ENST00000363970 107 ntBASIC-4.53□□□□□ -3.13
VPS13AQ96RL7 SNORD115-32-201ENST00000364079 82 ntBASIC-4.53□□□□□ -3.13
VPS13AQ96RL7 MIR5197-201ENST00000583721 112 ntBASIC-4.53□□□□□ -3.13
VPS13AQ96RL7 MIR548V-201ENST00000584165 80 ntBASIC-4.53□□□□□ -3.14
VPS13AQ96RL7 Y_RNA.66-201ENST00000362862 102 ntBASIC-4.54□□□□□ -3.14
VPS13AQ96RL7 AC006927.2-201ENST00000639256 389 ntBASIC-4.54□□□□□ -3.14
VPS13AQ96RL7 SNORD58A-201ENST00000383875 65 ntBASIC-4.55□□□□□ -3.14
VPS13AQ96RL7 RNU6-126P-201ENST00000516685 103 ntBASIC-4.55□□□□□ -3.14
VPS13AQ96RL7 RNU6-583P-201ENST00000516012 92 ntBASIC-4.55□□□□□ -3.14
VPS13AQ96RL7 AC069545.1-201ENST00000605671 358 ntBASIC-4.55□□□□□ -3.14
VPS13AQ96RL7 DLEU2_3.2-201ENST00000612883 73 ntBASIC-4.55□□□□□ -3.14
VPS13AQ96RL7 EIF1P2-201ENST00000428233 350 ntBASIC-4.56□□□□□ -3.14
VPS13AQ96RL7 SNORD45C-201ENST00000383893 79 ntBASIC-4.56□□□□□ -3.14
VPS13AQ96RL7 RNU6-1318P-201ENST00000365389 103 ntBASIC-4.57□□□□□ -3.14
VPS13AQ96RL7 SNORA41B-201ENST00000384785 128 ntBASIC-4.57□□□□□ -3.14
VPS13AQ96RL7 SNORA40.2-201ENST00000390847 128 ntBASIC-4.57□□□□□ -3.14
VPS13AQ96RL7 RNU6-976P-201ENST00000516086 111 ntBASIC-4.57□□□□□ -3.14
VPS13AQ96RL7 AC124864.2-201ENST00000624736 186 ntBASIC-4.57□□□□□ -3.14
VPS13AQ96RL7 RNU6-1296P-201ENST00000383879 107 ntBASIC-4.57□□□□□ -3.14
VPS13AQ96RL7 MIR630-201ENST00000384957 97 ntBASIC-4.58□□□□□ -3.14
VPS13AQ96RL7 MIR548G-201ENST00000408442 89 ntBASIC-4.58□□□□□ -3.14
VPS13AQ96RL7 AC002553.4-201ENST00000616896 331 ntBASIC-4.58□□□□□ -3.14
VPS13AQ96RL7 RNU6-888P-201ENST00000363010 101 ntBASIC-4.59□□□□□ -3.14
VPS13AQ96RL7 RNU6-681P-201ENST00000364012 104 ntBASIC-4.59□□□□□ -3.14
VPS13AQ96RL7 Y_RNA.304-201ENST00000365011 112 ntBASIC-4.59□□□□□ -3.14
VPS13AQ96RL7 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-4.59□□□□□ -3.14
VPS13AQ96RL7 MTND3P9-201ENST00000429526 346 ntBASIC-4.59□□□□□ -3.14
VPS13AQ96RL7 MRPS35P2-201ENST00000508242 191 ntBASIC-4.59□□□□□ -3.14
VPS13AQ96RL7 RNU4-69P-201ENST00000410677 143 ntBASIC-4.6□□□□□ -3.15
VPS13AQ96RL7 RNU7-141P-201ENST00000459304 62 ntBASIC-4.6□□□□□ -3.15
VPS13AQ96RL7 RNU6-1114P-201ENST00000516022 107 ntBASIC-4.6□□□□□ -3.15
Retrieved 100 of 98,524 protein–RNA pairs in 244.5 ms