Protein–RNA interactions for Protein: Q96MR9

ZNF560, Zinc finger protein 560, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560Q96MR9 DNAJC19P2-201ENST00000593340 302 ntBASIC-0.17□□□□□ -2.44
ZNF560Q96MR9 RN7SL660P-201ENST00000614852 299 ntBASIC-0.17□□□□□ -2.44
ZNF560Q96MR9 AC073869.9-201ENST00000641610 120 ntBASIC-0.17□□□□□ -2.44
ZNF560Q96MR9 Y_RNA.240-201ENST00000364469 95 ntBASIC-0.18□□□□□ -2.44
ZNF560Q96MR9 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.18□□□□□ -2.44
ZNF560Q96MR9 Y_RNA.280-201ENST00000364765 112 ntBASIC-0.18□□□□□ -2.44
ZNF560Q96MR9 Y_RNA.360-201ENST00000365512 102 ntBASIC-0.18□□□□□ -2.44
ZNF560Q96MR9 RNU6-196P-201ENST00000384315 107 ntBASIC-0.18□□□□□ -2.44
ZNF560Q96MR9 MIR519E-201ENST00000385075 84 ntBASIC-0.18□□□□□ -2.44
ZNF560Q96MR9 SNORD37.2-201ENST00000391075 66 ntBASIC-0.18□□□□□ -2.44
ZNF560Q96MR9 SNORD77B-201ENST00000391112 67 ntBASIC-0.18□□□□□ -2.44
ZNF560Q96MR9 MTATP6P21-201ENST00000440681 189 ntBASIC-0.18□□□□□ -2.44
ZNF560Q96MR9 AC093423.1-201ENST00000440817 142 ntBASIC-0.18□□□□□ -2.44
ZNF560Q96MR9 Y_RNA.35-201ENST00000362601 101 ntBASIC-0.19□□□□□ -2.44
ZNF560Q96MR9 RNU6-1260P-201ENST00000362944 107 ntBASIC-0.19□□□□□ -2.44
ZNF560Q96MR9 RNU1-141P-201ENST00000364623 158 ntBASIC-0.19□□□□□ -2.44
ZNF560Q96MR9 RNU6-915P-201ENST00000364943 103 ntBASIC-0.19□□□□□ -2.44
ZNF560Q96MR9 RNU6-652P-201ENST00000365488 107 ntBASIC-0.19□□□□□ -2.44
ZNF560Q96MR9 SNORA25.13-201ENST00000516395 103 ntBASIC-0.19□□□□□ -2.44
ZNF560Q96MR9 RNU7-13P-201ENST00000516413 62 ntBASIC-0.19□□□□□ -2.44
ZNF560Q96MR9 RNU6-521P-201ENST00000516663 105 ntBASIC-0.19□□□□□ -2.44
ZNF560Q96MR9 RNU7-6P-201ENST00000516845 62 ntBASIC-0.19□□□□□ -2.44
ZNF560Q96MR9 RNU6-1006P-201ENST00000516998 103 ntBASIC-0.19□□□□□ -2.44
ZNF560Q96MR9 U6.100-201ENST00000636230 99 ntBASIC-0.19□□□□□ -2.44
ZNF560Q96MR9 SNORD115-19-201ENST00000363098 82 ntBASIC-0.2□□□□□ -2.44
ZNF560Q96MR9 SNORD115-18-201ENST00000363293 82 ntBASIC-0.2□□□□□ -2.44
ZNF560Q96MR9 SNORD115-17-201ENST00000364612 82 ntBASIC-0.2□□□□□ -2.44
ZNF560Q96MR9 Y_RNA.272-201ENST00000364696 102 ntBASIC-0.2□□□□□ -2.44
ZNF560Q96MR9 Y_RNA.299-201ENST00000364973 94 ntBASIC-0.2□□□□□ -2.44
ZNF560Q96MR9 Y_RNA.441-201ENST00000384123 112 ntBASIC-0.2□□□□□ -2.44
ZNF560Q96MR9 SNORA51.5-201ENST00000384126 131 ntBASIC-0.2□□□□□ -2.44
ZNF560Q96MR9 RNU6-571P-201ENST00000384128 107 ntBASIC-0.2□□□□□ -2.44
ZNF560Q96MR9 MIR516B1-201ENST00000385211 90 ntBASIC-0.2□□□□□ -2.44
ZNF560Q96MR9 MIR548I2-201ENST00000408348 149 ntBASIC-0.2□□□□□ -2.44
ZNF560Q96MR9 RNU6-1135P-201ENST00000411083 103 ntBASIC-0.2□□□□□ -2.44
ZNF560Q96MR9 AC244250.2-201ENST00000418731 148 ntBASIC-0.2□□□□□ -2.44
ZNF560Q96MR9 AC104692.1-201ENST00000472406 90 ntBASIC-0.2□□□□□ -2.44
ZNF560Q96MR9 RNU6-138P-201ENST00000515952 107 ntBASIC-0.2□□□□□ -2.44
ZNF560Q96MR9 AP002392.1-201ENST00000537692 208 ntBASIC-0.2□□□□□ -2.44
ZNF560Q96MR9 MIR3121-201ENST00000579680 77 ntBASIC-0.2□□□□□ -2.44
ZNF560Q96MR9 AC072026.1-201ENST00000605023 201 ntBASIC-0.2□□□□□ -2.44
ZNF560Q96MR9 RNU7-10P-201ENST00000607194 63 ntBASIC-0.2□□□□□ -2.44
ZNF560Q96MR9 RNU6-379P-201ENST00000363813 104 ntBASIC-0.21□□□□□ -2.44
ZNF560Q96MR9 SNORA75.1-201ENST00000391130 148 ntBASIC-0.21□□□□□ -2.44
ZNF560Q96MR9 RNU6-1234P-201ENST00000516877 103 ntBASIC-0.21□□□□□ -2.44
ZNF560Q96MR9 RNU7-188P-201ENST00000517063 64 ntBASIC-0.21□□□□□ -2.44
ZNF560Q96MR9 U7.6-201ENST00000610841 64 ntBASIC-0.21□□□□□ -2.44
ZNF560Q96MR9 MIR6507-201ENST00000613630 70 ntBASIC-0.21□□□□□ -2.44
ZNF560Q96MR9 AC021753.1-201ENST00000635724 168 ntBASIC-0.21□□□□□ -2.44
ZNF560Q96MR9 MIR655-201ENST00000362159 97 ntBASIC-0.22□□□□□ -2.44
ZNF560Q96MR9 Y_RNA.144-201ENST00000363521 113 ntBASIC-0.22□□□□□ -2.44
ZNF560Q96MR9 RNU6-151P-201ENST00000364158 107 ntBASIC-0.22□□□□□ -2.44
ZNF560Q96MR9 Y_RNA.342-201ENST00000365352 113 ntBASIC-0.22□□□□□ -2.44
ZNF560Q96MR9 RNU6-1318P-201ENST00000365389 103 ntBASIC-0.22□□□□□ -2.44
ZNF560Q96MR9 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-0.22□□□□□ -2.44
ZNF560Q96MR9 SNORA7.5-201ENST00000410672 110 ntBASIC-0.22□□□□□ -2.44
ZNF560Q96MR9 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.22□□□□□ -2.44
ZNF560Q96MR9 MIR2113-201ENST00000459007 91 ntBASIC-0.22□□□□□ -2.44
ZNF560Q96MR9 RNU7-120P-201ENST00000459334 63 ntBASIC-0.22□□□□□ -2.44
ZNF560Q96MR9 RNA5SP272-201ENST00000516095 111 ntBASIC-0.22□□□□□ -2.44
ZNF560Q96MR9 RNU6-781P-201ENST00000516377 101 ntBASIC-0.22□□□□□ -2.44
ZNF560Q96MR9 RNU6-388P-201ENST00000517012 105 ntBASIC-0.22□□□□□ -2.44
ZNF560Q96MR9 RNU6-389P-201ENST00000517048 105 ntBASIC-0.22□□□□□ -2.44
ZNF560Q96MR9 CR383656.4-201ENST00000546909 122 ntBASIC-0.22□□□□□ -2.44
ZNF560Q96MR9 AC084368.1-201ENST00000620935 65 ntBASIC-0.22□□□□□ -2.44
ZNF560Q96MR9 Y_RNA.114-201ENST00000363265 113 ntBASIC-0.23□□□□□ -2.45
ZNF560Q96MR9 RNU6-509P-201ENST00000363519 107 ntBASIC-0.23□□□□□ -2.45
ZNF560Q96MR9 U8.6-201ENST00000364939 135 ntBASIC-0.23□□□□□ -2.45
ZNF560Q96MR9 SNORD114-12-201ENST00000365400 75 ntBASIC-0.23□□□□□ -2.45
ZNF560Q96MR9 SNORD18B-201ENST00000365659 72 ntBASIC-0.23□□□□□ -2.45
ZNF560Q96MR9 RNU6-463P-201ENST00000384340 107 ntBASIC-0.23□□□□□ -2.45
ZNF560Q96MR9 SNORD4A-201ENST00000459174 72 ntBASIC-0.23□□□□□ -2.45
ZNF560Q96MR9 RN7SKP19-201ENST00000516016 252 ntBASIC-0.23□□□□□ -2.45
ZNF560Q96MR9 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.23□□□□□ -2.45
ZNF560Q96MR9 RNU6-175P-201ENST00000516896 107 ntBASIC-0.23□□□□□ -2.45
ZNF560Q96MR9 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-0.23□□□□□ -2.45
ZNF560Q96MR9 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.23□□□□□ -2.45
ZNF560Q96MR9 YWHAEP2-201ENST00000580066 112 ntBASIC-0.23□□□□□ -2.45
ZNF560Q96MR9 TRDV1-202ENST00000621643 102 ntBASIC-0.23□□□□□ -2.45
ZNF560Q96MR9 MIR148A-201ENST00000362215 68 ntBASIC-0.24□□□□□ -2.45
ZNF560Q96MR9 SNORD36A-201ENST00000362874 73 ntBASIC-0.24□□□□□ -2.45
ZNF560Q96MR9 RNU6-957P-201ENST00000363652 99 ntBASIC-0.24□□□□□ -2.45
ZNF560Q96MR9 RNA5SP205-201ENST00000364653 136 ntBASIC-0.24□□□□□ -2.45
ZNF560Q96MR9 Y_RNA.344-201ENST00000365381 112 ntBASIC-0.24□□□□□ -2.45
ZNF560Q96MR9 SNORD116-18-201ENST00000383961 92 ntBASIC-0.24□□□□□ -2.45
ZNF560Q96MR9 RNU6-804P-201ENST00000384286 107 ntBASIC-0.24□□□□□ -2.45
ZNF560Q96MR9 MIR329-2-201ENST00000385029 84 ntBASIC-0.24□□□□□ -2.45
ZNF560Q96MR9 MIR1263-201ENST00000408324 86 ntBASIC-0.24□□□□□ -2.45
ZNF560Q96MR9 RNU6-287P-201ENST00000516230 98 ntBASIC-0.24□□□□□ -2.45
ZNF560Q96MR9 Y_RNA.778-201ENST00000620203 90 ntBASIC-0.24□□□□□ -2.45
ZNF560Q96MR9 RNU6-1163P-201ENST00000364516 107 ntBASIC-0.25□□□□□ -2.45
ZNF560Q96MR9 RNU6-200P-201ENST00000364743 107 ntBASIC-0.25□□□□□ -2.45
ZNF560Q96MR9 SNORD49B-201ENST00000365172 72 ntBASIC-0.25□□□□□ -2.45
ZNF560Q96MR9 MIR539-201ENST00000365690 78 ntBASIC-0.25□□□□□ -2.45
ZNF560Q96MR9 Y_RNA.401-201ENST00000383965 117 ntBASIC-0.25□□□□□ -2.45
ZNF560Q96MR9 Y_RNA.420-201ENST00000384043 110 ntBASIC-0.25□□□□□ -2.45
ZNF560Q96MR9 RNU6-811P-201ENST00000384069 107 ntBASIC-0.25□□□□□ -2.45
ZNF560Q96MR9 MIR617-201ENST00000385030 97 ntBASIC-0.25□□□□□ -2.45
ZNF560Q96MR9 AC109327.2-201ENST00000448339 378 ntBASIC-0.25□□□□□ -2.45
ZNF560Q96MR9 MTND5P41-201ENST00000517498 206 ntBASIC-0.25□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 10.1 ms