Protein–RNA interactions for Protein: Q96EY7

PTCD3, Pentatricopeptide repeat domain-containing protein 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 689 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3Q96EY7 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
PTCD3Q96EY7 MIR1-1-201ENST00000362147 71 ntBASIC1.13□□□□□ -2.23
PTCD3Q96EY7 MIR100-201ENST00000385259 80 ntBASIC1.13□□□□□ -2.23
PTCD3Q96EY7 TRAJ51-201ENST00000504127 63 ntBASIC1.13□□□□□ -2.23
PTCD3Q96EY7 RNU6-977P-201ENST00000516411 103 ntBASIC1.13□□□□□ -2.23
PTCD3Q96EY7 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.12□□□□□ -2.23
PTCD3Q96EY7 Y_RNA.56-201ENST00000362798 112 ntBASIC1.12□□□□□ -2.23
PTCD3Q96EY7 SNORD36A-201ENST00000362874 73 ntBASIC1.12□□□□□ -2.23
PTCD3Q96EY7 RNU6-1134P-201ENST00000365156 101 ntBASIC1.12□□□□□ -2.23
PTCD3Q96EY7 RNU6-364P-201ENST00000384387 107 ntBASIC1.12□□□□□ -2.23
PTCD3Q96EY7 MIR618-201ENST00000385287 98 ntBASIC1.12□□□□□ -2.23
PTCD3Q96EY7 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.12□□□□□ -2.23
PTCD3Q96EY7 AC062037.1-201ENST00000605302 128 ntBASIC1.12□□□□□ -2.23
PTCD3Q96EY7 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
PTCD3Q96EY7 RNU6-402P-201ENST00000410678 103 ntBASIC1.11□□□□□ -2.23
PTCD3Q96EY7 SNORD63B-201ENST00000411005 70 ntBASIC1.11□□□□□ -2.23
PTCD3Q96EY7 RNU6ATAC17P-201ENST00000516074 71 ntBASIC1.11□□□□□ -2.23
PTCD3Q96EY7 RNU6-448P-201ENST00000517052 107 ntBASIC1.11□□□□□ -2.23
PTCD3Q96EY7 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
PTCD3Q96EY7 MIR101-2-201ENST00000362195 79 ntBASIC1.1□□□□□ -2.23
PTCD3Q96EY7 RNA5SP245-201ENST00000364239 121 ntBASIC1.1□□□□□ -2.23
PTCD3Q96EY7 RNU6-219P-201ENST00000364728 107 ntBASIC1.1□□□□□ -2.23
PTCD3Q96EY7 Y_RNA.388-201ENST00000383919 113 ntBASIC1.1□□□□□ -2.23
PTCD3Q96EY7 Y_RNA.536-201ENST00000384621 113 ntBASIC1.1□□□□□ -2.23
PTCD3Q96EY7 Y_RNA.609-201ENST00000410669 89 ntBASIC1.1□□□□□ -2.23
PTCD3Q96EY7 AC092628.1-201ENST00000436250 252 ntBASIC1.1□□□□□ -2.23
PTCD3Q96EY7 SNORD124-201ENST00000459577 104 ntBASIC1.1□□□□□ -2.23
PTCD3Q96EY7 RNU6-267P-201ENST00000516714 103 ntBASIC1.1□□□□□ -2.23
PTCD3Q96EY7 Y_RNA.697-201ENST00000516776 113 ntBASIC1.1□□□□□ -2.23
PTCD3Q96EY7 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.1□□□□□ -2.23
PTCD3Q96EY7 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.1□□□□□ -2.23
PTCD3Q96EY7 RMST_2.1-201ENST00000617263 136 ntBASIC1.1□□□□□ -2.23
PTCD3Q96EY7 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
PTCD3Q96EY7 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
PTCD3Q96EY7 SNORD116-22-201ENST00000384430 92 ntBASIC1.09□□□□□ -2.23
PTCD3Q96EY7 RNU6-291P-201ENST00000384720 107 ntBASIC1.09□□□□□ -2.23
PTCD3Q96EY7 MIR520F-201ENST00000384824 87 ntBASIC1.09□□□□□ -2.23
PTCD3Q96EY7 MIR635-201ENST00000384830 98 ntBASIC1.09□□□□□ -2.23
PTCD3Q96EY7 RNU6-1254P-201ENST00000391266 104 ntBASIC1.09□□□□□ -2.23
PTCD3Q96EY7 MIR1302-4-201ENST00000408701 150 ntBASIC1.09□□□□□ -2.23
PTCD3Q96EY7 RNY4P29-201ENST00000410801 97 ntBASIC1.09□□□□□ -2.23
PTCD3Q96EY7 RNA5SP404-201ENST00000517118 132 ntBASIC1.09□□□□□ -2.23
PTCD3Q96EY7 MIR548H5-201ENST00000580314 60 ntBASIC1.09□□□□□ -2.23
PTCD3Q96EY7 MIR6078-201ENST00000611069 100 ntBASIC1.09□□□□□ -2.23
PTCD3Q96EY7 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
PTCD3Q96EY7 RNU6-675P-201ENST00000384236 104 ntBASIC1.08□□□□□ -2.24
PTCD3Q96EY7 MIR450A2-201ENST00000385022 100 ntBASIC1.08□□□□□ -2.24
PTCD3Q96EY7 SNORD89-201ENST00000390981 114 ntBASIC1.08□□□□□ -2.24
PTCD3Q96EY7 RNU1-119P-201ENST00000391122 165 ntBASIC1.08□□□□□ -2.24
PTCD3Q96EY7 Y_RNA.620-201ENST00000411009 88 ntBASIC1.08□□□□□ -2.24
PTCD3Q96EY7 AC067940.1-201ENST00000458411 300 ntBASIC1.08□□□□□ -2.24
PTCD3Q96EY7 RNU7-195P-201ENST00000458793 62 ntBASIC1.08□□□□□ -2.24
PTCD3Q96EY7 MIR4668-201ENST00000582284 70 ntBASIC1.08□□□□□ -2.24
PTCD3Q96EY7 AC103810.9-201ENST00000606688 112 ntBASIC1.08□□□□□ -2.24
PTCD3Q96EY7 RNU1-124P-201ENST00000363861 145 ntBASIC1.07□□□□□ -2.24
PTCD3Q96EY7 RNU6-497P-201ENST00000365316 104 ntBASIC1.07□□□□□ -2.24
PTCD3Q96EY7 RNY1P4-201ENST00000384595 115 ntBASIC1.07□□□□□ -2.24
PTCD3Q96EY7 RNU6-535P-201ENST00000384722 107 ntBASIC1.07□□□□□ -2.24
PTCD3Q96EY7 MIR519A1-201ENST00000385257 85 ntBASIC1.07□□□□□ -2.24
PTCD3Q96EY7 RNU7-85P-201ENST00000458851 63 ntBASIC1.07□□□□□ -2.24
PTCD3Q96EY7 snoU13.11-201ENST00000459219 104 ntBASIC1.07□□□□□ -2.24
PTCD3Q96EY7 OR2A41P-201ENST00000473586 105 ntBASIC1.07□□□□□ -2.24
PTCD3Q96EY7 RNU6-1110P-201ENST00000516462 101 ntBASIC1.07□□□□□ -2.24
PTCD3Q96EY7 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.07□□□□□ -2.24
PTCD3Q96EY7 SNORD4B-201ENST00000459083 72 ntBASIC1.06□□□□□ -2.24
PTCD3Q96EY7 U7.7-201ENST00000459276 60 ntBASIC1.06□□□□□ -2.24
PTCD3Q96EY7 AP003327.1-201ENST00000529684 127 ntBASIC1.06□□□□□ -2.24
PTCD3Q96EY7 RNU7-10P-201ENST00000607194 63 ntBASIC1.06□□□□□ -2.24
PTCD3Q96EY7 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.06□□□□□ -2.24
PTCD3Q96EY7 MIR494-201ENST00000349529 81 ntBASIC1.05□□□□□ -2.24
PTCD3Q96EY7 RNU6-1335P-201ENST00000365426 107 ntBASIC1.05□□□□□ -2.24
PTCD3Q96EY7 SNORA26.2-201ENST00000390922 122 ntBASIC1.05□□□□□ -2.24
PTCD3Q96EY7 RNU6-243P-201ENST00000391140 107 ntBASIC1.05□□□□□ -2.24
PTCD3Q96EY7 FABP5P4-201ENST00000437203 171 ntBASIC1.05□□□□□ -2.24
PTCD3Q96EY7 Y_RNA.648-201ENST00000459455 110 ntBASIC1.05□□□□□ -2.24
PTCD3Q96EY7 RN7SKP12-201ENST00000516275 143 ntBASIC1.05□□□□□ -2.24
PTCD3Q96EY7 SNORA72.7-201ENST00000516349 94 ntBASIC1.05□□□□□ -2.24
PTCD3Q96EY7 snoMBII-202.2-201ENST00000517263 86 ntBASIC1.05□□□□□ -2.24
PTCD3Q96EY7 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.05□□□□□ -2.24
PTCD3Q96EY7 Y_RNA.73-201ENST00000362910 113 ntBASIC1.04□□□□□ -2.24
PTCD3Q96EY7 RNU6-1260P-201ENST00000362944 107 ntBASIC1.04□□□□□ -2.24
PTCD3Q96EY7 Y_RNA.191-201ENST00000363972 113 ntBASIC1.04□□□□□ -2.24
PTCD3Q96EY7 RNU6-820P-201ENST00000384273 107 ntBASIC1.04□□□□□ -2.24
PTCD3Q96EY7 MIR200A-201ENST00000384875 90 ntBASIC1.04□□□□□ -2.24
PTCD3Q96EY7 MIR520H-201ENST00000385126 88 ntBASIC1.04□□□□□ -2.24
PTCD3Q96EY7 MIR1276-201ENST00000408707 83 ntBASIC1.04□□□□□ -2.24
PTCD3Q96EY7 AL161932.1-201ENST00000437408 146 ntBASIC1.04□□□□□ -2.24
PTCD3Q96EY7 MIR6504-201ENST00000613520 61 ntBASIC1.04□□□□□ -2.24
PTCD3Q96EY7 uc_338.16-201ENST00000621804 95 ntBASIC1.04□□□□□ -2.24
PTCD3Q96EY7 Y_RNA.32-201ENST00000362589 110 ntBASIC1.03□□□□□ -2.24
PTCD3Q96EY7 RNU6-633P-201ENST00000362612 103 ntBASIC1.03□□□□□ -2.24
PTCD3Q96EY7 SNORD115-27-201ENST00000364430 82 ntBASIC1.03□□□□□ -2.24
PTCD3Q96EY7 Y_RNA.508-201ENST00000384502 114 ntBASIC1.03□□□□□ -2.24
PTCD3Q96EY7 MIR942-201ENST00000401111 86 ntBASIC1.03□□□□□ -2.24
PTCD3Q96EY7 RNU6-519P-201ENST00000410590 108 ntBASIC1.03□□□□□ -2.24
PTCD3Q96EY7 RNU6-75P-201ENST00000515944 104 ntBASIC1.03□□□□□ -2.24
PTCD3Q96EY7 Y_RNA.809-201ENST00000516058 95 ntBASIC1.03□□□□□ -2.24
PTCD3Q96EY7 SNORA31.14-201ENST00000516728 116 ntBASIC1.03□□□□□ -2.24
PTCD3Q96EY7 AC138907.6-201ENST00000568401 126 ntBASIC1.03□□□□□ -2.24
PTCD3Q96EY7 AC138869.1-201ENST00000568623 124 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 178.5 ms