Protein–RNA interactions for Protein: Q96B54

ZNF428, Zinc finger protein 428, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF428Q96B54 DEFB131E-201ENST00000532329 154 ntBASIC1.34□□□□□ -2.19
ZNF428Q96B54 MIR4698-201ENST00000577795 80 ntBASIC1.34□□□□□ -2.19
ZNF428Q96B54 MIR5582-201ENST00000579697 68 ntBASIC1.34□□□□□ -2.19
ZNF428Q96B54 MIR3973-201ENST00000579824 107 ntBASIC1.34□□□□□ -2.19
ZNF428Q96B54 MIR4491-201ENST00000581087 68 ntBASIC1.34□□□□□ -2.19
ZNF428Q96B54 AL353765.1-201ENST00000605514 183 ntBASIC1.34□□□□□ -2.19
ZNF428Q96B54 AL442128.1-201ENST00000615151 90 ntBASIC1.34□□□□□ -2.19
ZNF428Q96B54 Y_RNA.342-201ENST00000365352 113 ntBASIC1.33□□□□□ -2.2
ZNF428Q96B54 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
ZNF428Q96B54 RNU6-364P-201ENST00000384387 107 ntBASIC1.33□□□□□ -2.2
ZNF428Q96B54 MIR608-201ENST00000384820 100 ntBASIC1.33□□□□□ -2.2
ZNF428Q96B54 SNORD93-201ENST00000408813 74 ntBASIC1.33□□□□□ -2.2
ZNF428Q96B54 RNY4P30-201ENST00000410216 95 ntBASIC1.33□□□□□ -2.2
ZNF428Q96B54 BX276092.1-201ENST00000427368 251 ntBASIC1.33□□□□□ -2.2
ZNF428Q96B54 RNA5SP170-201ENST00000517150 101 ntBASIC1.33□□□□□ -2.2
ZNF428Q96B54 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
ZNF428Q96B54 RNA5SP62-201ENST00000363457 110 ntBASIC1.32□□□□□ -2.2
ZNF428Q96B54 MIR520F-201ENST00000384824 87 ntBASIC1.32□□□□□ -2.2
ZNF428Q96B54 MIR548J-201ENST00000408833 112 ntBASIC1.32□□□□□ -2.2
ZNF428Q96B54 RNU6-531P-201ENST00000516694 104 ntBASIC1.32□□□□□ -2.2
ZNF428Q96B54 AC008608.1-201ENST00000603910 127 ntBASIC1.32□□□□□ -2.2
ZNF428Q96B54 AC211469.2-201ENST00000605461 205 ntBASIC1.32□□□□□ -2.2
ZNF428Q96B54 MIR4679-1-201ENST00000637619 75 ntBASIC1.32□□□□□ -2.2
ZNF428Q96B54 MIR373-201ENST00000362273 69 ntBASIC1.31□□□□□ -2.2
ZNF428Q96B54 Y_RNA.290-201ENST00000364879 114 ntBASIC1.31□□□□□ -2.2
ZNF428Q96B54 RNU6-1335P-201ENST00000365426 107 ntBASIC1.31□□□□□ -2.2
ZNF428Q96B54 RNU6-1113P-201ENST00000384348 107 ntBASIC1.31□□□□□ -2.2
ZNF428Q96B54 MTATP8P2-201ENST00000435212 202 ntBASIC1.31□□□□□ -2.2
ZNF428Q96B54 RNU7-56P-201ENST00000458744 62 ntBASIC1.31□□□□□ -2.2
ZNF428Q96B54 Y_RNA.659-201ENST00000515994 113 ntBASIC1.31□□□□□ -2.2
ZNF428Q96B54 SCARNA23-201ENST00000516060 130 ntBASIC1.31□□□□□ -2.2
ZNF428Q96B54 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.31□□□□□ -2.2
ZNF428Q96B54 Y_RNA.78-201ENST00000362970 110 ntBASIC1.3□□□□□ -2.2
ZNF428Q96B54 RNU4-38P-201ENST00000364472 129 ntBASIC1.3□□□□□ -2.2
ZNF428Q96B54 Y_RNA.377-201ENST00000365644 108 ntBASIC1.3□□□□□ -2.2
ZNF428Q96B54 RNU6-86P-201ENST00000606534 107 ntBASIC1.3□□□□□ -2.2
ZNF428Q96B54 AC103810.9-201ENST00000606688 112 ntBASIC1.3□□□□□ -2.2
ZNF428Q96B54 MIR8066-201ENST00000617280 78 ntBASIC1.3□□□□□ -2.2
ZNF428Q96B54 Y_RNA.13-201ENST00000362403 112 ntBASIC1.29□□□□□ -2.2
ZNF428Q96B54 Y_RNA.119-201ENST00000363301 96 ntBASIC1.29□□□□□ -2.2
ZNF428Q96B54 RNA5SP457-201ENST00000363657 124 ntBASIC1.29□□□□□ -2.2
ZNF428Q96B54 RNU4-36P-201ENST00000364294 144 ntBASIC1.29□□□□□ -2.2
ZNF428Q96B54 RNU6-865P-201ENST00000364772 107 ntBASIC1.29□□□□□ -2.2
ZNF428Q96B54 AC004941.2-201ENST00000427009 228 ntBASIC1.29□□□□□ -2.2
ZNF428Q96B54 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.29□□□□□ -2.2
ZNF428Q96B54 RNU7-156P-201ENST00000517214 74 ntBASIC1.29□□□□□ -2.2
ZNF428Q96B54 MIR4653-201ENST00000585107 83 ntBASIC1.29□□□□□ -2.2
ZNF428Q96B54 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.28□□□□□ -2.2
ZNF428Q96B54 Y_RNA.95-201ENST00000363079 95 ntBASIC1.28□□□□□ -2.2
ZNF428Q96B54 RNU6-403P-201ENST00000363163 104 ntBASIC1.28□□□□□ -2.2
ZNF428Q96B54 Y_RNA.107-201ENST00000363190 121 ntBASIC1.28□□□□□ -2.2
ZNF428Q96B54 Y_RNA.115-201ENST00000363272 98 ntBASIC1.28□□□□□ -2.2
ZNF428Q96B54 RNU6-1255P-201ENST00000363434 112 ntBASIC1.28□□□□□ -2.2
ZNF428Q96B54 Y_RNA.190-201ENST00000363964 101 ntBASIC1.28□□□□□ -2.2
ZNF428Q96B54 MIR193B-201ENST00000384907 83 ntBASIC1.28□□□□□ -2.2
ZNF428Q96B54 Y_RNA.601-201ENST00000410500 113 ntBASIC1.28□□□□□ -2.2
ZNF428Q96B54 RNU6-1018P-201ENST00000516577 106 ntBASIC1.28□□□□□ -2.2
ZNF428Q96B54 AC133485.1-201ENST00000567176 124 ntBASIC1.28□□□□□ -2.2
ZNF428Q96B54 MIR4500-201ENST00000579472 76 ntBASIC1.28□□□□□ -2.2
ZNF428Q96B54 U7.3-201ENST00000616123 62 ntBASIC1.28□□□□□ -2.2
ZNF428Q96B54 MALAT1.1-201ENST00000618249 95 ntBASIC1.28□□□□□ -2.2
ZNF428Q96B54 Y_RNA.98-201ENST00000363109 102 ntBASIC1.27□□□□□ -2.21
ZNF428Q96B54 RNU6-1187P-201ENST00000364771 110 ntBASIC1.27□□□□□ -2.21
ZNF428Q96B54 SNORA72.6-201ENST00000384520 129 ntBASIC1.27□□□□□ -2.21
ZNF428Q96B54 AC013244.2-201ENST00000603396 103 ntBASIC1.27□□□□□ -2.21
ZNF428Q96B54 RNU6-1244P-201ENST00000363614 108 ntBASIC1.26□□□□□ -2.21
ZNF428Q96B54 MIR573-201ENST00000384964 99 ntBASIC1.26□□□□□ -2.21
ZNF428Q96B54 MIR548G-201ENST00000408442 89 ntBASIC1.26□□□□□ -2.21
ZNF428Q96B54 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.26□□□□□ -2.21
ZNF428Q96B54 AC103810.7-201ENST00000607821 91 ntBASIC1.26□□□□□ -2.21
ZNF428Q96B54 Y_RNA.818-201ENST00000618813 71 ntBASIC1.26□□□□□ -2.21
ZNF428Q96B54 AC025521.1-201ENST00000621624 286 ntBASIC1.26□□□□□ -2.21
ZNF428Q96B54 AP001362.1-201ENST00000625165 124 ntBASIC1.26□□□□□ -2.21
ZNF428Q96B54 MIR1273G-201ENST00000577677 100 ntBASIC1.25□□□□□ -2.21
ZNF428Q96B54 Y_RNA.42-201ENST00000362660 108 ntBASIC1.24□□□□□ -2.21
ZNF428Q96B54 Y_RNA.173-201ENST00000363776 113 ntBASIC1.24□□□□□ -2.21
ZNF428Q96B54 RNA5SP245-201ENST00000364239 121 ntBASIC1.24□□□□□ -2.21
ZNF428Q96B54 Y_RNA.544-201ENST00000384650 113 ntBASIC1.24□□□□□ -2.21
ZNF428Q96B54 MIR520H-201ENST00000385126 88 ntBASIC1.24□□□□□ -2.21
ZNF428Q96B54 SPINT5P-201ENST00000448174 155 ntBASIC1.24□□□□□ -2.21
ZNF428Q96B54 SNORA40.13-201ENST00000516379 120 ntBASIC1.24□□□□□ -2.21
ZNF428Q96B54 RNU6-135P-201ENST00000516769 101 ntBASIC1.24□□□□□ -2.21
ZNF428Q96B54 MTND5P40-201ENST00000559945 246 ntBASIC1.24□□□□□ -2.21
ZNF428Q96B54 HSBP1P2-201ENST00000299671 229 ntBASIC1.23□□□□□ -2.21
ZNF428Q96B54 SNORD38.1-201ENST00000363863 68 ntBASIC1.23□□□□□ -2.21
ZNF428Q96B54 MIR532-201ENST00000385025 91 ntBASIC1.23□□□□□ -2.21
ZNF428Q96B54 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.23□□□□□ -2.21
ZNF428Q96B54 SNORD99-201ENST00000408612 74 ntBASIC1.23□□□□□ -2.21
ZNF428Q96B54 SNRPGP12-201ENST00000449481 213 ntBASIC1.23□□□□□ -2.21
ZNF428Q96B54 RNU7-106P-201ENST00000459514 67 ntBASIC1.23□□□□□ -2.21
ZNF428Q96B54 RNU6-762P-201ENST00000517107 102 ntBASIC1.23□□□□□ -2.21
ZNF428Q96B54 MIR6082-201ENST00000613604 109 ntBASIC1.23□□□□□ -2.21
ZNF428Q96B54 Y_RNA.10-201ENST00000362371 110 ntBASIC1.22□□□□□ -2.21
ZNF428Q96B54 Y_RNA.43-201ENST00000362670 111 ntBASIC1.22□□□□□ -2.21
ZNF428Q96B54 Y_RNA.93-201ENST00000363066 109 ntBASIC1.22□□□□□ -2.21
ZNF428Q96B54 RNU4-58P-201ENST00000363192 141 ntBASIC1.22□□□□□ -2.21
ZNF428Q96B54 RNU6-35P-201ENST00000384530 107 ntBASIC1.22□□□□□ -2.21
ZNF428Q96B54 MIR181B2-201ENST00000385004 89 ntBASIC1.22□□□□□ -2.21
ZNF428Q96B54 SNORD100-201ENST00000408573 76 ntBASIC1.22□□□□□ -2.21
ZNF428Q96B54 AC098934.3-201ENST00000430450 190 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 201.5 ms