Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 RNU6-158P-201ENST00000517104 100 ntBASIC0.94□□□□□ -2.26
ATG4AQ8WYN0 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.94□□□□□ -2.26
ATG4AQ8WYN0 MIR96-201ENST00000362288 78 ntBASIC0.93□□□□□ -2.26
ATG4AQ8WYN0 Y_RNA.118-201ENST00000363300 101 ntBASIC0.93□□□□□ -2.26
ATG4AQ8WYN0 RNU6-535P-201ENST00000384722 107 ntBASIC0.93□□□□□ -2.26
ATG4AQ8WYN0 MIR573-201ENST00000384964 99 ntBASIC0.93□□□□□ -2.26
ATG4AQ8WYN0 MIR4777-201ENST00000583710 86 ntBASIC0.93□□□□□ -2.26
ATG4AQ8WYN0 RNU6-1244P-201ENST00000363614 108 ntBASIC0.92□□□□□ -2.26
ATG4AQ8WYN0 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
ATG4AQ8WYN0 SNORD99-201ENST00000408612 74 ntBASIC0.92□□□□□ -2.26
ATG4AQ8WYN0 AL078603.1-201ENST00000603824 313 ntBASIC0.92□□□□□ -2.26
ATG4AQ8WYN0 AP001318.4-201ENST00000616637 121 ntBASIC0.92□□□□□ -2.26
ATG4AQ8WYN0 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.92□□□□□ -2.26
ATG4AQ8WYN0 Y_RNA.96-201ENST00000363092 109 ntBASIC0.91□□□□□ -2.26
ATG4AQ8WYN0 Y_RNA.342-201ENST00000365352 113 ntBASIC0.91□□□□□ -2.26
ATG4AQ8WYN0 Y_RNA.355-201ENST00000365462 98 ntBASIC0.91□□□□□ -2.26
ATG4AQ8WYN0 Y_RNA.467-201ENST00000384297 102 ntBASIC0.91□□□□□ -2.26
ATG4AQ8WYN0 MIR635-201ENST00000384830 98 ntBASIC0.91□□□□□ -2.26
ATG4AQ8WYN0 AC002350.1-201ENST00000490759 375 ntBASIC0.91□□□□□ -2.26
ATG4AQ8WYN0 RNU6-168P-201ENST00000516189 101 ntBASIC0.91□□□□□ -2.26
ATG4AQ8WYN0 MIR548Z-201ENST00000584743 97 ntBASIC0.91□□□□□ -2.26
ATG4AQ8WYN0 RNU6-86P-201ENST00000606534 107 ntBASIC0.91□□□□□ -2.26
ATG4AQ8WYN0 Y_RNA.57-201ENST00000362806 113 ntBASIC0.9□□□□□ -2.27
ATG4AQ8WYN0 Y_RNA.174-201ENST00000363781 105 ntBASIC0.9□□□□□ -2.27
ATG4AQ8WYN0 RNU6-813P-201ENST00000384691 107 ntBASIC0.9□□□□□ -2.27
ATG4AQ8WYN0 RNA5SP89-201ENST00000410300 108 ntBASIC0.9□□□□□ -2.27
ATG4AQ8WYN0 SNORA40.13-201ENST00000516379 120 ntBASIC0.9□□□□□ -2.27
ATG4AQ8WYN0 AL353765.1-201ENST00000605514 183 ntBASIC0.9□□□□□ -2.27
ATG4AQ8WYN0 uc_338.16-201ENST00000621804 95 ntBASIC0.9□□□□□ -2.27
ATG4AQ8WYN0 Y_RNA.32-201ENST00000362589 110 ntBASIC0.89□□□□□ -2.27
ATG4AQ8WYN0 RNU6-1125P-201ENST00000363601 107 ntBASIC0.89□□□□□ -2.27
ATG4AQ8WYN0 RNU1-93P-201ENST00000364704 169 ntBASIC0.89□□□□□ -2.27
ATG4AQ8WYN0 Y_RNA.348-201ENST00000365403 103 ntBASIC0.89□□□□□ -2.27
ATG4AQ8WYN0 RNU6-480P-201ENST00000384332 107 ntBASIC0.89□□□□□ -2.27
ATG4AQ8WYN0 MIR519A1-201ENST00000385257 85 ntBASIC0.89□□□□□ -2.27
ATG4AQ8WYN0 SNORD63B-201ENST00000411005 70 ntBASIC0.89□□□□□ -2.27
ATG4AQ8WYN0 AC244098.3-201ENST00000424803 96 ntBASIC0.89□□□□□ -2.27
ATG4AQ8WYN0 MTATP8P2-201ENST00000435212 202 ntBASIC0.89□□□□□ -2.27
ATG4AQ8WYN0 AC092628.1-201ENST00000436250 252 ntBASIC0.89□□□□□ -2.27
ATG4AQ8WYN0 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.89□□□□□ -2.27
ATG4AQ8WYN0 TRAJ51-201ENST00000504127 63 ntBASIC0.89□□□□□ -2.27
ATG4AQ8WYN0 Y_RNA.677-201ENST00000516401 85 ntBASIC0.89□□□□□ -2.27
ATG4AQ8WYN0 Y_RNA.705-201ENST00000516862 110 ntBASIC0.89□□□□□ -2.27
ATG4AQ8WYN0 AC138907.6-201ENST00000568401 126 ntBASIC0.89□□□□□ -2.27
ATG4AQ8WYN0 AC138869.1-201ENST00000568623 124 ntBASIC0.89□□□□□ -2.27
ATG4AQ8WYN0 MIR4698-201ENST00000577795 80 ntBASIC0.89□□□□□ -2.27
ATG4AQ8WYN0 MIR2052-201ENST00000636055 55 ntBASIC0.89□□□□□ -2.27
ATG4AQ8WYN0 RNA5SP117-201ENST00000365294 118 ntBASIC0.88□□□□□ -2.27
ATG4AQ8WYN0 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.88□□□□□ -2.27
ATG4AQ8WYN0 SNORA31.14-201ENST00000516728 116 ntBASIC0.88□□□□□ -2.27
ATG4AQ8WYN0 AC011195.1-201ENST00000578177 177 ntBASIC0.88□□□□□ -2.27
ATG4AQ8WYN0 MIR3612-201ENST00000579753 87 ntBASIC0.88□□□□□ -2.27
ATG4AQ8WYN0 SNORD114-2-201ENST00000363953 78 ntBASIC0.87□□□□□ -2.27
ATG4AQ8WYN0 RNA5SP245-201ENST00000364239 121 ntBASIC0.87□□□□□ -2.27
ATG4AQ8WYN0 RNU6-1187P-201ENST00000364771 110 ntBASIC0.87□□□□□ -2.27
ATG4AQ8WYN0 MIR532-201ENST00000385025 91 ntBASIC0.87□□□□□ -2.27
ATG4AQ8WYN0 RNU6-644P-201ENST00000391155 98 ntBASIC0.87□□□□□ -2.27
ATG4AQ8WYN0 RNU6-972P-201ENST00000391208 107 ntBASIC0.87□□□□□ -2.27
ATG4AQ8WYN0 AC097635.1-201ENST00000450678 155 ntBASIC0.87□□□□□ -2.27
ATG4AQ8WYN0 snoU13.18-201ENST00000459483 104 ntBASIC0.87□□□□□ -2.27
ATG4AQ8WYN0 RNU7-61P-201ENST00000515897 61 ntBASIC0.87□□□□□ -2.27
ATG4AQ8WYN0 RNA5SP220-201ENST00000516298 104 ntBASIC0.87□□□□□ -2.27
ATG4AQ8WYN0 MIR7111-201ENST00000619751 72 ntBASIC0.87□□□□□ -2.27
ATG4AQ8WYN0 MIR6734-201ENST00000621166 68 ntBASIC0.87□□□□□ -2.27
ATG4AQ8WYN0 RNU6-905P-201ENST00000384434 107 ntBASIC0.86□□□□□ -2.27
ATG4AQ8WYN0 MIR520E-201ENST00000384867 87 ntBASIC0.86□□□□□ -2.27
ATG4AQ8WYN0 MIR516A2-201ENST00000384888 90 ntBASIC0.86□□□□□ -2.27
ATG4AQ8WYN0 MIR181B2-201ENST00000385004 89 ntBASIC0.86□□□□□ -2.27
ATG4AQ8WYN0 MIR516A1-201ENST00000385033 90 ntBASIC0.86□□□□□ -2.27
ATG4AQ8WYN0 RNU6-887P-201ENST00000410660 100 ntBASIC0.86□□□□□ -2.27
ATG4AQ8WYN0 RPS29P1-201ENST00000465274 159 ntBASIC0.86□□□□□ -2.27
ATG4AQ8WYN0 MIR3973-201ENST00000579824 107 ntBASIC0.86□□□□□ -2.27
ATG4AQ8WYN0 AC103810.7-201ENST00000607821 91 ntBASIC0.86□□□□□ -2.27
ATG4AQ8WYN0 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.86□□□□□ -2.27
ATG4AQ8WYN0 MIR6767-201ENST00000637302 66 ntBASIC0.86□□□□□ -2.27
ATG4AQ8WYN0 RNU6-640P-201ENST00000363693 105 ntBASIC0.85□□□□□ -2.27
ATG4AQ8WYN0 RNU6-42P-201ENST00000384165 107 ntBASIC0.85□□□□□ -2.27
ATG4AQ8WYN0 MIR608-201ENST00000384820 100 ntBASIC0.85□□□□□ -2.27
ATG4AQ8WYN0 RNU6-1254P-201ENST00000391266 104 ntBASIC0.85□□□□□ -2.27
ATG4AQ8WYN0 AC244505.6-201ENST00000452829 130 ntBASIC0.85□□□□□ -2.27
ATG4AQ8WYN0 RNU7-106P-201ENST00000459514 67 ntBASIC0.85□□□□□ -2.27
ATG4AQ8WYN0 RNU6-135P-201ENST00000516769 101 ntBASIC0.85□□□□□ -2.27
ATG4AQ8WYN0 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.85□□□□□ -2.27
ATG4AQ8WYN0 RNU4-45P-201ENST00000365469 141 ntBASIC0.84□□□□□ -2.27
ATG4AQ8WYN0 RNU7-195P-201ENST00000458793 62 ntBASIC0.84□□□□□ -2.27
ATG4AQ8WYN0 Y_RNA.809-201ENST00000516058 95 ntBASIC0.84□□□□□ -2.27
ATG4AQ8WYN0 RNU6-351P-201ENST00000516097 100 ntBASIC0.84□□□□□ -2.27
ATG4AQ8WYN0 RNU6-469P-201ENST00000516253 101 ntBASIC0.84□□□□□ -2.27
ATG4AQ8WYN0 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC0.84□□□□□ -2.27
ATG4AQ8WYN0 RNU6-1260P-201ENST00000362944 107 ntBASIC0.83□□□□□ -2.28
ATG4AQ8WYN0 RNU6-243P-201ENST00000391140 107 ntBASIC0.83□□□□□ -2.28
ATG4AQ8WYN0 RPL39P28-201ENST00000465655 155 ntBASIC0.83□□□□□ -2.28
ATG4AQ8WYN0 AC025521.1-201ENST00000621624 286 ntBASIC0.83□□□□□ -2.28
ATG4AQ8WYN0 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.82□□□□□ -2.28
ATG4AQ8WYN0 MIR18A-201ENST00000362310 71 ntBASIC0.82□□□□□ -2.28
ATG4AQ8WYN0 SNORD36A-201ENST00000362874 73 ntBASIC0.82□□□□□ -2.28
ATG4AQ8WYN0 MIR599-201ENST00000385069 95 ntBASIC0.82□□□□□ -2.28
ATG4AQ8WYN0 MIR644A-201ENST00000385262 94 ntBASIC0.82□□□□□ -2.28
ATG4AQ8WYN0 ACA64.5-201ENST00000516207 127 ntBASIC0.82□□□□□ -2.28
ATG4AQ8WYN0 AL513043.2-201ENST00000573941 143 ntBASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 206.8 ms