Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.57□□□□□ -2.32
HMGB4Q8WW32 RNU6-1006P-201ENST00000516998 103 ntBASIC0.57□□□□□ -2.32
HMGB4Q8WW32 RNA5SP47-201ENST00000517230 109 ntBASIC0.57□□□□□ -2.32
HMGB4Q8WW32 AL512310.12-203ENST00000640543 90 ntBASIC0.57□□□□□ -2.32
HMGB4Q8WW32 SNORA36.1-201ENST00000363424 132 ntBASIC0.56□□□□□ -2.32
HMGB4Q8WW32 Y_RNA.261-201ENST00000364631 102 ntBASIC0.56□□□□□ -2.32
HMGB4Q8WW32 RNU6-571P-201ENST00000384128 107 ntBASIC0.56□□□□□ -2.32
HMGB4Q8WW32 SNORA8.2-201ENST00000384372 139 ntBASIC0.56□□□□□ -2.32
HMGB4Q8WW32 SNORD38.2-201ENST00000384470 69 ntBASIC0.56□□□□□ -2.32
HMGB4Q8WW32 Y_RNA.549-201ENST00000384657 102 ntBASIC0.56□□□□□ -2.32
HMGB4Q8WW32 RNU6-733P-201ENST00000410759 104 ntBASIC0.56□□□□□ -2.32
HMGB4Q8WW32 TRAJ51-201ENST00000504127 63 ntBASIC0.56□□□□□ -2.32
HMGB4Q8WW32 AL670379.3-201ENST00000605040 251 ntBASIC0.56□□□□□ -2.32
HMGB4Q8WW32 AL365222.1-201ENST00000614661 98 ntBASIC0.56□□□□□ -2.32
HMGB4Q8WW32 AC132825.6-201ENST00000638861 357 ntBASIC0.56□□□□□ -2.32
HMGB4Q8WW32 RNU6-1229P-201ENST00000364295 107 ntBASIC0.55□□□□□ -2.32
HMGB4Q8WW32 Y_RNA.309-201ENST00000365046 111 ntBASIC0.55□□□□□ -2.32
HMGB4Q8WW32 MIR6828-201ENST00000636181 60 ntBASIC0.55□□□□□ -2.32
HMGB4Q8WW32 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.55□□□□□ -2.32
HMGB4Q8WW32 Y_RNA.30-201ENST00000362572 97 ntBASIC0.54□□□□□ -2.32
HMGB4Q8WW32 SNORA40.8-201ENST00000411034 126 ntBASIC0.54□□□□□ -2.32
HMGB4Q8WW32 SCARNA16.5-201ENST00000517114 183 ntBASIC0.54□□□□□ -2.32
HMGB4Q8WW32 AC244669.1-204ENST00000621564 178 ntBASIC0.54□□□□□ -2.32
HMGB4Q8WW32 MIR924-201ENST00000638017 53 ntBASIC0.54□□□□□ -2.32
HMGB4Q8WW32 RNU6-170P-201ENST00000362832 104 ntBASIC0.53□□□□□ -2.32
HMGB4Q8WW32 Y_RNA.115-201ENST00000363272 98 ntBASIC0.53□□□□□ -2.32
HMGB4Q8WW32 RNU6-1117P-201ENST00000384525 104 ntBASIC0.53□□□□□ -2.32
HMGB4Q8WW32 MIR92A1-201ENST00000385233 78 ntBASIC0.53□□□□□ -2.32
HMGB4Q8WW32 RNU6-850P-201ENST00000516934 103 ntBASIC0.53□□□□□ -2.32
HMGB4Q8WW32 uc_338.17-201ENST00000619633 179 ntBASIC0.53□□□□□ -2.32
HMGB4Q8WW32 SNORD118-201ENST00000363593 134 ntBASIC0.52□□□□□ -2.33
HMGB4Q8WW32 SNORD38.1-201ENST00000363863 68 ntBASIC0.52□□□□□ -2.33
HMGB4Q8WW32 Y_RNA.374-201ENST00000365606 101 ntBASIC0.52□□□□□ -2.33
HMGB4Q8WW32 RNU6-1201P-201ENST00000384227 107 ntBASIC0.52□□□□□ -2.33
HMGB4Q8WW32 RNU6-22P-201ENST00000384355 107 ntBASIC0.52□□□□□ -2.33
HMGB4Q8WW32 MIR518A1-201ENST00000385068 85 ntBASIC0.52□□□□□ -2.33
HMGB4Q8WW32 MIR519A1-201ENST00000385257 85 ntBASIC0.52□□□□□ -2.33
HMGB4Q8WW32 AC097635.1-201ENST00000450678 155 ntBASIC0.52□□□□□ -2.33
HMGB4Q8WW32 RNA5SP268-201ENST00000516828 124 ntBASIC0.52□□□□□ -2.33
HMGB4Q8WW32 RNA5SP330-201ENST00000517096 96 ntBASIC0.52□□□□□ -2.33
HMGB4Q8WW32 MTND5P40-201ENST00000559945 246 ntBASIC0.52□□□□□ -2.33
HMGB4Q8WW32 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.51□□□□□ -2.33
HMGB4Q8WW32 SNORD115-24-201ENST00000363528 82 ntBASIC0.51□□□□□ -2.33
HMGB4Q8WW32 Y_RNA.247-201ENST00000364500 92 ntBASIC0.51□□□□□ -2.33
HMGB4Q8WW32 Y_RNA.258-201ENST00000364613 105 ntBASIC0.51□□□□□ -2.33
HMGB4Q8WW32 SNORD113-1-201ENST00000365321 69 ntBASIC0.51□□□□□ -2.33
HMGB4Q8WW32 RNU6-1168P-201ENST00000390831 104 ntBASIC0.51□□□□□ -2.33
HMGB4Q8WW32 SNORD63B-201ENST00000411005 70 ntBASIC0.51□□□□□ -2.33
HMGB4Q8WW32 SNORD71-201ENST00000411292 86 ntBASIC0.51□□□□□ -2.33
HMGB4Q8WW32 AC114737.2-201ENST00000421583 173 ntBASIC0.51□□□□□ -2.33
HMGB4Q8WW32 RNU6-62P-201ENST00000516526 102 ntBASIC0.51□□□□□ -2.33
HMGB4Q8WW32 AC068339.1-201ENST00000526965 141 ntBASIC0.51□□□□□ -2.33
HMGB4Q8WW32 SNORA25.18-201ENST00000607153 114 ntBASIC0.51□□□□□ -2.33
HMGB4Q8WW32 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.51□□□□□ -2.33
HMGB4Q8WW32 Y_RNA.49-201ENST00000362714 112 ntBASIC0.5□□□□□ -2.33
HMGB4Q8WW32 RNU6-716P-201ENST00000365621 103 ntBASIC0.5□□□□□ -2.33
HMGB4Q8WW32 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.5□□□□□ -2.33
HMGB4Q8WW32 AL157398.1-201ENST00000452981 186 ntBASIC0.5□□□□□ -2.33
HMGB4Q8WW32 SNORA68.3-201ENST00000515906 83 ntBASIC0.5□□□□□ -2.33
HMGB4Q8WW32 AC243829.6-201ENST00000612652 106 ntBASIC0.5□□□□□ -2.33
HMGB4Q8WW32 MIR8087-201ENST00000612745 78 ntBASIC0.5□□□□□ -2.33
HMGB4Q8WW32 AL442128.1-201ENST00000615151 90 ntBASIC0.5□□□□□ -2.33
HMGB4Q8WW32 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.5□□□□□ -2.33
HMGB4Q8WW32 Y_RNA.35-201ENST00000362601 101 ntBASIC0.49□□□□□ -2.33
HMGB4Q8WW32 RNA5SP457-201ENST00000363657 124 ntBASIC0.49□□□□□ -2.33
HMGB4Q8WW32 RNA5SP205-201ENST00000364653 136 ntBASIC0.49□□□□□ -2.33
HMGB4Q8WW32 Y_RNA.281-201ENST00000364774 94 ntBASIC0.49□□□□□ -2.33
HMGB4Q8WW32 Y_RNA.342-201ENST00000365352 113 ntBASIC0.49□□□□□ -2.33
HMGB4Q8WW32 Y_RNA.377-201ENST00000365644 108 ntBASIC0.49□□□□□ -2.33
HMGB4Q8WW32 RNU6-880P-201ENST00000384526 107 ntBASIC0.49□□□□□ -2.33
HMGB4Q8WW32 MIR599-201ENST00000385069 95 ntBASIC0.49□□□□□ -2.33
HMGB4Q8WW32 MIR548G-201ENST00000408442 89 ntBASIC0.49□□□□□ -2.33
HMGB4Q8WW32 MIR4694-201ENST00000578534 80 ntBASIC0.49□□□□□ -2.33
HMGB4Q8WW32 MIR5009-201ENST00000578736 100 ntBASIC0.49□□□□□ -2.33
HMGB4Q8WW32 RNU6-90P-201ENST00000606352 106 ntBASIC0.49□□□□□ -2.33
HMGB4Q8WW32 MIR7107-201ENST00000611489 80 ntBASIC0.49□□□□□ -2.33
HMGB4Q8WW32 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.49□□□□□ -2.33
HMGB4Q8WW32 AC091304.10-201ENST00000641554 121 ntBASIC0.49□□□□□ -2.33
HMGB4Q8WW32 U8.6-201ENST00000364939 135 ntBASIC0.48□□□□□ -2.33
HMGB4Q8WW32 SNORD116-21-201ENST00000384507 92 ntBASIC0.48□□□□□ -2.33
HMGB4Q8WW32 MIR577-201ENST00000385196 96 ntBASIC0.48□□□□□ -2.33
HMGB4Q8WW32 SPINT5P-201ENST00000448174 155 ntBASIC0.48□□□□□ -2.33
HMGB4Q8WW32 RNU7-195P-201ENST00000458793 62 ntBASIC0.48□□□□□ -2.33
HMGB4Q8WW32 RNA5SP227-201ENST00000516184 113 ntBASIC0.48□□□□□ -2.33
HMGB4Q8WW32 RNU6-479P-201ENST00000516348 105 ntBASIC0.48□□□□□ -2.33
HMGB4Q8WW32 RNU7-161P-201ENST00000517289 62 ntBASIC0.48□□□□□ -2.33
HMGB4Q8WW32 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.48□□□□□ -2.33
HMGB4Q8WW32 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
HMGB4Q8WW32 MIRLET7D-201ENST00000362263 87 ntBASIC0.47□□□□□ -2.33
HMGB4Q8WW32 RNA5SP403-201ENST00000363598 108 ntBASIC0.47□□□□□ -2.33
HMGB4Q8WW32 Y_RNA.173-201ENST00000363776 113 ntBASIC0.47□□□□□ -2.33
HMGB4Q8WW32 RNU7-106P-201ENST00000459514 67 ntBASIC0.47□□□□□ -2.33
HMGB4Q8WW32 Y_RNA.809-201ENST00000516058 95 ntBASIC0.47□□□□□ -2.33
HMGB4Q8WW32 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.47□□□□□ -2.33
HMGB4Q8WW32 MIR330-201ENST00000362196 94 ntBASIC0.46□□□□□ -2.34
HMGB4Q8WW32 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC0.46□□□□□ -2.34
HMGB4Q8WW32 RNU6-1260P-201ENST00000362944 107 ntBASIC0.45□□□□□ -2.34
HMGB4Q8WW32 SNORD44.1-201ENST00000363202 61 ntBASIC0.45□□□□□ -2.34
HMGB4Q8WW32 VTRNA1-3-201ENST00000365645 89 ntBASIC0.45□□□□□ -2.34
HMGB4Q8WW32 RNU6-1144P-201ENST00000384247 104 ntBASIC0.45□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 277 ms