Protein–RNA interactions for Protein: Q8TF05

PPP4R1, Serine/threonine-protein phosphatase 4 regulatory subunit 1, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1Q8TF05 SNORD116-19-201ENST00000384729 92 ntBASIC0.41□□□□□ -2.34
PPP4R1Q8TF05 MIR548M-201ENST00000408260 86 ntBASIC0.41□□□□□ -2.34
PPP4R1Q8TF05 RNU7-161P-201ENST00000517289 62 ntBASIC0.41□□□□□ -2.34
PPP4R1Q8TF05 MIR6828-201ENST00000636181 60 ntBASIC0.41□□□□□ -2.34
PPP4R1Q8TF05 RNU6-363P-201ENST00000362895 105 ntBASIC0.4□□□□□ -2.35
PPP4R1Q8TF05 RNU6-1229P-201ENST00000364295 107 ntBASIC0.4□□□□□ -2.35
PPP4R1Q8TF05 Y_RNA.258-201ENST00000364613 105 ntBASIC0.4□□□□□ -2.35
PPP4R1Q8TF05 Y_RNA.261-201ENST00000364631 102 ntBASIC0.4□□□□□ -2.35
PPP4R1Q8TF05 Y_RNA.346-201ENST00000365385 112 ntBASIC0.4□□□□□ -2.35
PPP4R1Q8TF05 MIR548H5-201ENST00000580314 60 ntBASIC0.4□□□□□ -2.35
PPP4R1Q8TF05 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.4□□□□□ -2.35
PPP4R1Q8TF05 RNU6-1313P-201ENST00000362622 102 ntBASIC0.39□□□□□ -2.35
PPP4R1Q8TF05 SNORD44.1-201ENST00000363202 61 ntBASIC0.39□□□□□ -2.35
PPP4R1Q8TF05 Y_RNA.115-201ENST00000363272 98 ntBASIC0.39□□□□□ -2.35
PPP4R1Q8TF05 RNY4P6-201ENST00000363667 96 ntBASIC0.39□□□□□ -2.35
PPP4R1Q8TF05 MIR548A1-201ENST00000385041 97 ntBASIC0.39□□□□□ -2.35
PPP4R1Q8TF05 RNU6-816P-201ENST00000390914 107 ntBASIC0.39□□□□□ -2.35
PPP4R1Q8TF05 RNU6-1268P-201ENST00000391214 107 ntBASIC0.39□□□□□ -2.35
PPP4R1Q8TF05 RNU6-1239P-201ENST00000391310 107 ntBASIC0.39□□□□□ -2.35
PPP4R1Q8TF05 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.39□□□□□ -2.35
PPP4R1Q8TF05 SNORD63B-201ENST00000411005 70 ntBASIC0.39□□□□□ -2.35
PPP4R1Q8TF05 SNORD71-201ENST00000411292 86 ntBASIC0.39□□□□□ -2.35
PPP4R1Q8TF05 AC069271.1-201ENST00000445577 156 ntBASIC0.39□□□□□ -2.35
PPP4R1Q8TF05 RNU7-195P-201ENST00000458793 62 ntBASIC0.39□□□□□ -2.35
PPP4R1Q8TF05 Y_RNA.649-201ENST00000459077 103 ntBASIC0.39□□□□□ -2.35
PPP4R1Q8TF05 RNU7-106P-201ENST00000459514 67 ntBASIC0.39□□□□□ -2.35
PPP4R1Q8TF05 RNU6-1333P-201ENST00000516162 93 ntBASIC0.39□□□□□ -2.35
PPP4R1Q8TF05 RNA5SP227-201ENST00000516184 113 ntBASIC0.39□□□□□ -2.35
PPP4R1Q8TF05 RNU6-850P-201ENST00000516934 103 ntBASIC0.39□□□□□ -2.35
PPP4R1Q8TF05 AC138869.1-201ENST00000568623 124 ntBASIC0.39□□□□□ -2.35
PPP4R1Q8TF05 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.39□□□□□ -2.35
PPP4R1Q8TF05 Y_RNA.155-201ENST00000363632 101 ntBASIC0.38□□□□□ -2.35
PPP4R1Q8TF05 RNU6-716P-201ENST00000365621 103 ntBASIC0.38□□□□□ -2.35
PPP4R1Q8TF05 MIR599-201ENST00000385069 95 ntBASIC0.38□□□□□ -2.35
PPP4R1Q8TF05 RNU7-104P-201ENST00000459398 79 ntBASIC0.38□□□□□ -2.35
PPP4R1Q8TF05 RNU6-135P-201ENST00000516769 101 ntBASIC0.38□□□□□ -2.35
PPP4R1Q8TF05 AL162726.3-218ENST00000636401 95 ntBASIC0.38□□□□□ -2.35
PPP4R1Q8TF05 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
PPP4R1Q8TF05 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.37□□□□□ -2.35
PPP4R1Q8TF05 Y_RNA.221-201ENST00000364248 96 ntBASIC0.37□□□□□ -2.35
PPP4R1Q8TF05 MIR635-201ENST00000384830 98 ntBASIC0.37□□□□□ -2.35
PPP4R1Q8TF05 AC007012.1-201ENST00000567192 175 ntBASIC0.37□□□□□ -2.35
PPP4R1Q8TF05 MIR4752-201ENST00000579672 72 ntBASIC0.37□□□□□ -2.35
PPP4R1Q8TF05 MIR6755-201ENST00000619993 66 ntBASIC0.37□□□□□ -2.35
PPP4R1Q8TF05 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.37□□□□□ -2.35
PPP4R1Q8TF05 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.37□□□□□ -2.35
PPP4R1Q8TF05 AL512310.12-203ENST00000640543 90 ntBASIC0.37□□□□□ -2.35
PPP4R1Q8TF05 RNU6-170P-201ENST00000362832 104 ntBASIC0.36□□□□□ -2.35
PPP4R1Q8TF05 RNA5SP403-201ENST00000363598 108 ntBASIC0.36□□□□□ -2.35
PPP4R1Q8TF05 Y_RNA.353-201ENST00000365440 108 ntBASIC0.36□□□□□ -2.35
PPP4R1Q8TF05 RNU6-409P-201ENST00000384114 104 ntBASIC0.36□□□□□ -2.35
PPP4R1Q8TF05 RNU6-571P-201ENST00000384128 107 ntBASIC0.36□□□□□ -2.35
PPP4R1Q8TF05 RNU6-1201P-201ENST00000384227 107 ntBASIC0.36□□□□□ -2.35
PPP4R1Q8TF05 RNU6-959P-201ENST00000384671 107 ntBASIC0.36□□□□□ -2.35
PPP4R1Q8TF05 AC097635.1-201ENST00000450678 155 ntBASIC0.36□□□□□ -2.35
PPP4R1Q8TF05 AL109933.3-201ENST00000619095 188 ntBASIC0.36□□□□□ -2.35
PPP4R1Q8TF05 Y_RNA.85-201ENST00000363014 111 ntBASIC0.35□□□□□ -2.35
PPP4R1Q8TF05 MIR516A2-201ENST00000384888 90 ntBASIC0.35□□□□□ -2.35
PPP4R1Q8TF05 MIR516A1-201ENST00000385033 90 ntBASIC0.35□□□□□ -2.35
PPP4R1Q8TF05 RNU1-29P-201ENST00000606574 126 ntBASIC0.35□□□□□ -2.35
PPP4R1Q8TF05 AL365222.1-201ENST00000614661 98 ntBASIC0.35□□□□□ -2.35
PPP4R1Q8TF05 AC091304.10-201ENST00000641554 121 ntBASIC0.35□□□□□ -2.35
PPP4R1Q8TF05 Y_RNA.507-201ENST00000384500 99 ntBASIC0.34□□□□□ -2.36
PPP4R1Q8TF05 MIR548I2-201ENST00000408348 149 ntBASIC0.34□□□□□ -2.36
PPP4R1Q8TF05 Y_RNA.35-201ENST00000362601 101 ntBASIC0.33□□□□□ -2.36
PPP4R1Q8TF05 RNU6-726P-201ENST00000364680 107 ntBASIC0.33□□□□□ -2.36
PPP4R1Q8TF05 RNU6-81P-201ENST00000365608 104 ntBASIC0.33□□□□□ -2.36
PPP4R1Q8TF05 MIR577-201ENST00000385196 96 ntBASIC0.33□□□□□ -2.36
PPP4R1Q8TF05 MIR548A3-201ENST00000385297 97 ntBASIC0.33□□□□□ -2.36
PPP4R1Q8TF05 TMSB4XP3-201ENST00000445144 114 ntBASIC0.33□□□□□ -2.36
PPP4R1Q8TF05 RNU6-863P-201ENST00000515989 104 ntBASIC0.33□□□□□ -2.36
PPP4R1Q8TF05 Y_RNA.809-201ENST00000516058 95 ntBASIC0.33□□□□□ -2.36
PPP4R1Q8TF05 SNORA62.5-201ENST00000516634 120 ntBASIC0.33□□□□□ -2.36
PPP4R1Q8TF05 MTND5P40-201ENST00000559945 246 ntBASIC0.33□□□□□ -2.36
PPP4R1Q8TF05 RNU7-10P-201ENST00000607194 63 ntBASIC0.33□□□□□ -2.36
PPP4R1Q8TF05 U6.95-201ENST00000636931 70 ntBASIC0.33□□□□□ -2.36
PPP4R1Q8TF05 Y_RNA.374-201ENST00000365606 101 ntBASIC0.32□□□□□ -2.36
PPP4R1Q8TF05 RNU6-524P-201ENST00000384270 107 ntBASIC0.32□□□□□ -2.36
PPP4R1Q8TF05 MIR519A1-201ENST00000385257 85 ntBASIC0.32□□□□□ -2.36
PPP4R1Q8TF05 MIR548G-201ENST00000408442 89 ntBASIC0.32□□□□□ -2.36
PPP4R1Q8TF05 SPINT5P-201ENST00000448174 155 ntBASIC0.32□□□□□ -2.36
PPP4R1Q8TF05 RPL39P34-201ENST00000477141 156 ntBASIC0.32□□□□□ -2.36
PPP4R1Q8TF05 MIR4679-2-201ENST00000578358 77 ntBASIC0.32□□□□□ -2.36
PPP4R1Q8TF05 MIR3613-201ENST00000579844 87 ntBASIC0.32□□□□□ -2.36
PPP4R1Q8TF05 Y_RNA.30-201ENST00000362572 97 ntBASIC0.31□□□□□ -2.36
PPP4R1Q8TF05 SNORD38.1-201ENST00000363863 68 ntBASIC0.31□□□□□ -2.36
PPP4R1Q8TF05 Y_RNA.342-201ENST00000365352 113 ntBASIC0.31□□□□□ -2.36
PPP4R1Q8TF05 RNU6-1126P-201ENST00000384002 107 ntBASIC0.31□□□□□ -2.36
PPP4R1Q8TF05 Y_RNA.423-201ENST00000384057 113 ntBASIC0.31□□□□□ -2.36
PPP4R1Q8TF05 RNU6-815P-201ENST00000384080 113 ntBASIC0.31□□□□□ -2.36
PPP4R1Q8TF05 MIR1197-201ENST00000408818 88 ntBASIC0.31□□□□□ -2.36
PPP4R1Q8TF05 MIR1912-201ENST00000410389 80 ntBASIC0.31□□□□□ -2.36
PPP4R1Q8TF05 RNU6-1018P-201ENST00000516577 106 ntBASIC0.31□□□□□ -2.36
PPP4R1Q8TF05 MIR3910-1-201ENST00000580936 111 ntBASIC0.31□□□□□ -2.36
PPP4R1Q8TF05 AC023932.2-201ENST00000603176 175 ntBASIC0.31□□□□□ -2.36
PPP4R1Q8TF05 AL670379.3-201ENST00000605040 251 ntBASIC0.31□□□□□ -2.36
PPP4R1Q8TF05 AL442128.1-201ENST00000615151 90 ntBASIC0.31□□□□□ -2.36
PPP4R1Q8TF05 U8.6-201ENST00000364939 135 ntBASIC0.3□□□□□ -2.36
PPP4R1Q8TF05 SNORD38.2-201ENST00000384470 69 ntBASIC0.3□□□□□ -2.36
PPP4R1Q8TF05 RNU2-59P-201ENST00000410482 191 ntBASIC0.3□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 208.3 ms