Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC1.01□□□□□ -2.25
SNED1Q8TER0 MIR4500-201ENST00000579472 76 ntBASIC1.01□□□□□ -2.25
SNED1Q8TER0 AC012676.2-201ENST00000619258 186 ntBASIC1.01□□□□□ -2.25
SNED1Q8TER0 MIR6516-201ENST00000630554 81 ntBASIC1.01□□□□□ -2.25
SNED1Q8TER0 AC010487.4-201ENST00000637027 61 ntBASIC1.01□□□□□ -2.25
SNED1Q8TER0 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
SNED1Q8TER0 RNU6-573P-201ENST00000383938 106 ntBASIC1□□□□□ -2.25
SNED1Q8TER0 MT-TN-201ENST00000387400 73 ntBASIC1□□□□□ -2.25
SNED1Q8TER0 MIR1185-1-201ENST00000408598 86 ntBASIC1□□□□□ -2.25
SNED1Q8TER0 RNU7-62P-201ENST00000458856 62 ntBASIC1□□□□□ -2.25
SNED1Q8TER0 RNU6ATAC17P-201ENST00000516074 71 ntBASIC1□□□□□ -2.25
SNED1Q8TER0 RNA5SP404-201ENST00000517118 132 ntBASIC1□□□□□ -2.25
SNED1Q8TER0 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1□□□□□ -2.25
SNED1Q8TER0 AP003716.2-201ENST00000528260 108 ntBASIC1□□□□□ -2.25
SNED1Q8TER0 MIR8087-201ENST00000612745 78 ntBASIC1□□□□□ -2.25
SNED1Q8TER0 MIR30D-201ENST00000362283 70 ntBASIC0.99□□□□□ -2.25
SNED1Q8TER0 SNORD116-10-201ENST00000363791 102 ntBASIC0.99□□□□□ -2.25
SNED1Q8TER0 RNY1P2-201ENST00000364820 117 ntBASIC0.99□□□□□ -2.25
SNED1Q8TER0 MIR563-201ENST00000385080 79 ntBASIC0.99□□□□□ -2.25
SNED1Q8TER0 RNU6-1165P-201ENST00000410119 107 ntBASIC0.99□□□□□ -2.25
SNED1Q8TER0 RNA5SP193-201ENST00000410353 107 ntBASIC0.99□□□□□ -2.25
SNED1Q8TER0 RN7SKP12-201ENST00000516275 143 ntBASIC0.99□□□□□ -2.25
SNED1Q8TER0 SEPT14P17-201ENST00000617978 177 ntBASIC0.99□□□□□ -2.25
SNED1Q8TER0 MIR330-201ENST00000362196 94 ntBASIC0.98□□□□□ -2.25
SNED1Q8TER0 RNU6-1125P-201ENST00000363601 107 ntBASIC0.98□□□□□ -2.25
SNED1Q8TER0 Y_RNA.173-201ENST00000363776 113 ntBASIC0.98□□□□□ -2.25
SNED1Q8TER0 RNU6-654P-201ENST00000364373 107 ntBASIC0.98□□□□□ -2.25
SNED1Q8TER0 RNU6-480P-201ENST00000384332 107 ntBASIC0.98□□□□□ -2.25
SNED1Q8TER0 SNORA25-201ENST00000384384 134 ntBASIC0.98□□□□□ -2.25
SNED1Q8TER0 MIR181B2-201ENST00000385004 89 ntBASIC0.98□□□□□ -2.25
SNED1Q8TER0 MIR936-201ENST00000401264 98 ntBASIC0.98□□□□□ -2.25
SNED1Q8TER0 Y_RNA.593-201ENST00000410292 98 ntBASIC0.98□□□□□ -2.25
SNED1Q8TER0 RNA5SP95-201ENST00000410319 137 ntBASIC0.98□□□□□ -2.25
SNED1Q8TER0 Y_RNA.119-201ENST00000363301 96 ntBASIC0.98□□□□□ -2.25
SNED1Q8TER0 RNA5SP133-201ENST00000363368 119 ntBASIC0.98□□□□□ -2.25
SNED1Q8TER0 Y_RNA.168-201ENST00000363740 102 ntBASIC0.98□□□□□ -2.25
SNED1Q8TER0 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.98□□□□□ -2.25
SNED1Q8TER0 RNU6-613P-201ENST00000410412 108 ntBASIC0.98□□□□□ -2.25
SNED1Q8TER0 RNU6-592P-201ENST00000411333 103 ntBASIC0.98□□□□□ -2.25
SNED1Q8TER0 OR2A41P-201ENST00000473586 105 ntBASIC0.98□□□□□ -2.25
SNED1Q8TER0 AC138749.4-201ENST00000563970 127 ntBASIC0.98□□□□□ -2.25
SNED1Q8TER0 AC090897.1-201ENST00000580909 226 ntBASIC0.98□□□□□ -2.25
SNED1Q8TER0 U6.109-201ENST00000636749 87 ntBASIC0.98□□□□□ -2.25
SNED1Q8TER0 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
SNED1Q8TER0 RNU6-1244P-201ENST00000363614 108 ntBASIC0.97□□□□□ -2.25
SNED1Q8TER0 RNU1-124P-201ENST00000363861 145 ntBASIC0.97□□□□□ -2.25
SNED1Q8TER0 Y_RNA.330-201ENST00000365230 109 ntBASIC0.97□□□□□ -2.25
SNED1Q8TER0 SNORD93-201ENST00000408813 74 ntBASIC0.97□□□□□ -2.25
SNED1Q8TER0 RNU6-402P-201ENST00000410678 103 ntBASIC0.97□□□□□ -2.25
SNED1Q8TER0 RNU6-165P-201ENST00000517170 99 ntBASIC0.97□□□□□ -2.25
SNED1Q8TER0 SNORD114-2-201ENST00000363953 78 ntBASIC0.96□□□□□ -2.26
SNED1Q8TER0 RNU6-580P-201ENST00000365159 107 ntBASIC0.96□□□□□ -2.26
SNED1Q8TER0 RNU6-35P-201ENST00000384530 107 ntBASIC0.96□□□□□ -2.26
SNED1Q8TER0 RNU6-1152P-201ENST00000384576 107 ntBASIC0.96□□□□□ -2.26
SNED1Q8TER0 SNORA2B-201ENST00000384583 137 ntBASIC0.96□□□□□ -2.26
SNED1Q8TER0 MT-TF-201ENST00000387314 71 ntBASIC0.96□□□□□ -2.26
SNED1Q8TER0 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.96□□□□□ -2.26
SNED1Q8TER0 RNU6-1054P-201ENST00000411293 104 ntBASIC0.96□□□□□ -2.26
SNED1Q8TER0 MIR18B-201ENST00000454574 71 ntBASIC0.96□□□□□ -2.26
SNED1Q8TER0 AC048334.1-201ENST00000477975 159 ntBASIC0.96□□□□□ -2.26
SNED1Q8TER0 AC022137.1-201ENST00000483735 151 ntBASIC0.96□□□□□ -2.26
SNED1Q8TER0 RNU6-267P-201ENST00000516714 103 ntBASIC0.96□□□□□ -2.26
SNED1Q8TER0 MIR4491-201ENST00000581087 68 ntBASIC0.96□□□□□ -2.26
SNED1Q8TER0 MIR4668-201ENST00000582284 70 ntBASIC0.96□□□□□ -2.26
SNED1Q8TER0 uc_338.6-201ENST00000613544 171 ntBASIC0.96□□□□□ -2.26
SNED1Q8TER0 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.96□□□□□ -2.26
SNED1Q8TER0 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC0.96□□□□□ -2.26
SNED1Q8TER0 HSBP1P2-201ENST00000299671 229 ntBASIC0.95□□□□□ -2.26
SNED1Q8TER0 RNU6-403P-201ENST00000363163 104 ntBASIC0.95□□□□□ -2.26
SNED1Q8TER0 Y_RNA.609-201ENST00000410669 89 ntBASIC0.95□□□□□ -2.26
SNED1Q8TER0 BX276092.1-201ENST00000427368 251 ntBASIC0.95□□□□□ -2.26
SNED1Q8TER0 SNORA70.22-201ENST00000517160 124 ntBASIC0.95□□□□□ -2.26
SNED1Q8TER0 AL513043.2-201ENST00000573941 143 ntBASIC0.95□□□□□ -2.26
SNED1Q8TER0 MIR4711-201ENST00000578274 70 ntBASIC0.95□□□□□ -2.26
SNED1Q8TER0 MIR8066-201ENST00000617280 78 ntBASIC0.95□□□□□ -2.26
SNED1Q8TER0 AC027335.2-201ENST00000624030 375 ntBASIC0.95□□□□□ -2.26
SNED1Q8TER0 MIR1245B-201ENST00000636115 69 ntBASIC0.95□□□□□ -2.26
SNED1Q8TER0 AC008163.1-202ENST00000636004 2889 ntBASIC0.94□□□□□ -2.26
SNED1Q8TER0 MIR377-201ENST00000362145 69 ntBASIC0.94□□□□□ -2.26
SNED1Q8TER0 Y_RNA.73-201ENST00000362910 113 ntBASIC0.94□□□□□ -2.26
SNED1Q8TER0 SNORD113.3-201ENST00000364630 78 ntBASIC0.94□□□□□ -2.26
SNED1Q8TER0 RNU6-675P-201ENST00000384236 104 ntBASIC0.94□□□□□ -2.26
SNED1Q8TER0 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
SNED1Q8TER0 Y_RNA.620-201ENST00000411009 88 ntBASIC0.94□□□□□ -2.26
SNED1Q8TER0 RNU6-850P-201ENST00000516934 103 ntBASIC0.94□□□□□ -2.26
SNED1Q8TER0 AC025521.1-201ENST00000621624 286 ntBASIC0.94□□□□□ -2.26
SNED1Q8TER0 MIR6086-201ENST00000638065 55 ntBASIC0.94□□□□□ -2.26
SNED1Q8TER0 AC023934.1-201ENST00000574529 2389 ntBASIC0.93□□□□□ -2.26
SNED1Q8TER0 Y_RNA.57-201ENST00000362806 113 ntBASIC0.93□□□□□ -2.26
SNED1Q8TER0 RNU1-36P-201ENST00000365130 165 ntBASIC0.93□□□□□ -2.26
SNED1Q8TER0 RNU6-934P-201ENST00000365154 107 ntBASIC0.93□□□□□ -2.26
SNED1Q8TER0 RNU6-497P-201ENST00000365316 104 ntBASIC0.93□□□□□ -2.26
SNED1Q8TER0 RNU6-242P-201ENST00000384359 107 ntBASIC0.93□□□□□ -2.26
SNED1Q8TER0 RNU4-83P-201ENST00000410863 133 ntBASIC0.93□□□□□ -2.26
SNED1Q8TER0 SNORA31.2-201ENST00000516019 134 ntBASIC0.93□□□□□ -2.26
SNED1Q8TER0 RNU6-351P-201ENST00000516097 100 ntBASIC0.93□□□□□ -2.26
SNED1Q8TER0 RNU6-531P-201ENST00000516694 104 ntBASIC0.93□□□□□ -2.26
SNED1Q8TER0 AC020891.4-201ENST00000605745 93 ntBASIC0.93□□□□□ -2.26
SNED1Q8TER0 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
SNED1Q8TER0 RNU4-58P-201ENST00000363192 141 ntBASIC0.92□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 240.9 ms