Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 SNORD114-24-201ENST00000365029 72 ntBASIC1.17□□□□□ -2.22
HIPK4Q8NE63 RNU6-535P-201ENST00000384722 107 ntBASIC1.17□□□□□ -2.22
HIPK4Q8NE63 SNORD105-201ENST00000386910 85 ntBASIC1.17□□□□□ -2.22
HIPK4Q8NE63 RNU6-1254P-201ENST00000391266 104 ntBASIC1.17□□□□□ -2.22
HIPK4Q8NE63 RNA5SP458-201ENST00000516188 119 ntBASIC1.17□□□□□ -2.22
HIPK4Q8NE63 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.17□□□□□ -2.22
HIPK4Q8NE63 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.17□□□□□ -2.22
HIPK4Q8NE63 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.17□□□□□ -2.22
HIPK4Q8NE63 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.17□□□□□ -2.22
HIPK4Q8NE63 SNORA40.6-201ENST00000391153 128 ntBASIC1.16□□□□□ -2.22
HIPK4Q8NE63 RNU7-195P-201ENST00000458793 62 ntBASIC1.16□□□□□ -2.22
HIPK4Q8NE63 MIR4421-201ENST00000578133 69 ntBASIC1.16□□□□□ -2.22
HIPK4Q8NE63 MIR3660-201ENST00000584845 100 ntBASIC1.16□□□□□ -2.22
HIPK4Q8NE63 SNORA7.1-201ENST00000363750 139 ntBASIC1.15□□□□□ -2.23
HIPK4Q8NE63 Y_RNA.558-201ENST00000384685 113 ntBASIC1.15□□□□□ -2.23
HIPK4Q8NE63 RNU7-95P-201ENST00000459222 64 ntBASIC1.15□□□□□ -2.23
HIPK4Q8NE63 RNA5SP255-201ENST00000516370 107 ntBASIC1.15□□□□□ -2.23
HIPK4Q8NE63 uc_338.16-201ENST00000621804 95 ntBASIC1.15□□□□□ -2.23
HIPK4Q8NE63 Y_RNA.32-201ENST00000362589 110 ntBASIC1.14□□□□□ -2.23
HIPK4Q8NE63 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.14□□□□□ -2.23
HIPK4Q8NE63 RNU6-1134P-201ENST00000365156 101 ntBASIC1.13□□□□□ -2.23
HIPK4Q8NE63 RNU6-243P-201ENST00000391140 107 ntBASIC1.13□□□□□ -2.23
HIPK4Q8NE63 Y_RNA.593-201ENST00000410292 98 ntBASIC1.13□□□□□ -2.23
HIPK4Q8NE63 Y_RNA.609-201ENST00000410669 89 ntBASIC1.13□□□□□ -2.23
HIPK4Q8NE63 Y_RNA.648-201ENST00000459455 110 ntBASIC1.13□□□□□ -2.23
HIPK4Q8NE63 OR2A41P-201ENST00000473586 105 ntBASIC1.13□□□□□ -2.23
HIPK4Q8NE63 SNORA31.14-201ENST00000516728 116 ntBASIC1.13□□□□□ -2.23
HIPK4Q8NE63 AC138907.6-201ENST00000568401 126 ntBASIC1.13□□□□□ -2.23
HIPK4Q8NE63 AC138869.1-201ENST00000568623 124 ntBASIC1.13□□□□□ -2.23
HIPK4Q8NE63 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.13□□□□□ -2.23
HIPK4Q8NE63 RNU6-1260P-201ENST00000362944 107 ntBASIC1.12□□□□□ -2.23
HIPK4Q8NE63 AP1B1P2-201ENST00000416196 106 ntBASIC1.12□□□□□ -2.23
HIPK4Q8NE63 AC097635.1-201ENST00000450678 155 ntBASIC1.12□□□□□ -2.23
HIPK4Q8NE63 snoU13.11-201ENST00000459219 104 ntBASIC1.12□□□□□ -2.23
HIPK4Q8NE63 AC002350.1-201ENST00000490759 375 ntBASIC1.12□□□□□ -2.23
HIPK4Q8NE63 RNU6-237P-201ENST00000515985 71 ntBASIC1.12□□□□□ -2.23
HIPK4Q8NE63 Y_RNA.809-201ENST00000516058 95 ntBASIC1.12□□□□□ -2.23
HIPK4Q8NE63 RNU6-762P-201ENST00000517107 102 ntBASIC1.12□□□□□ -2.23
HIPK4Q8NE63 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.12□□□□□ -2.23
HIPK4Q8NE63 Y_RNA.17-201ENST00000362433 111 ntBASIC1.11□□□□□ -2.23
HIPK4Q8NE63 SNORD73B-201ENST00000364394 72 ntBASIC1.11□□□□□ -2.23
HIPK4Q8NE63 AC244505.6-201ENST00000452829 130 ntBASIC1.11□□□□□ -2.23
HIPK4Q8NE63 RNU7-85P-201ENST00000458851 63 ntBASIC1.11□□□□□ -2.23
HIPK4Q8NE63 AC025627.3-201ENST00000582078 182 ntBASIC1.11□□□□□ -2.23
HIPK4Q8NE63 AL353770.2-201ENST00000620024 78 ntBASIC1.11□□□□□ -2.23
HIPK4Q8NE63 RNU6-219P-201ENST00000364728 107 ntBASIC1.1□□□□□ -2.23
HIPK4Q8NE63 SNORD116-22-201ENST00000384430 92 ntBASIC1.1□□□□□ -2.23
HIPK4Q8NE63 MIR573-201ENST00000384964 99 ntBASIC1.1□□□□□ -2.23
HIPK4Q8NE63 MIR599-201ENST00000385069 95 ntBASIC1.1□□□□□ -2.23
HIPK4Q8NE63 RNU6-402P-201ENST00000410678 103 ntBASIC1.1□□□□□ -2.23
HIPK4Q8NE63 MIR4668-201ENST00000582284 70 ntBASIC1.1□□□□□ -2.23
HIPK4Q8NE63 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.1□□□□□ -2.23
HIPK4Q8NE63 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
HIPK4Q8NE63 Y_RNA.174-201ENST00000363781 105 ntBASIC1.09□□□□□ -2.23
HIPK4Q8NE63 RNU6-675P-201ENST00000384236 104 ntBASIC1.09□□□□□ -2.23
HIPK4Q8NE63 SNORD4B-201ENST00000459083 72 ntBASIC1.09□□□□□ -2.23
HIPK4Q8NE63 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.09□□□□□ -2.24
HIPK4Q8NE63 RNU6-957P-201ENST00000363652 99 ntBASIC1.08□□□□□ -2.24
HIPK4Q8NE63 Y_RNA.283-201ENST00000364798 112 ntBASIC1.08□□□□□ -2.24
HIPK4Q8NE63 RNY1P4-201ENST00000384595 115 ntBASIC1.08□□□□□ -2.24
HIPK4Q8NE63 RNU6-519P-201ENST00000410590 108 ntBASIC1.08□□□□□ -2.24
HIPK4Q8NE63 Y_RNA.620-201ENST00000411009 88 ntBASIC1.08□□□□□ -2.24
HIPK4Q8NE63 AL161932.1-201ENST00000437408 146 ntBASIC1.08□□□□□ -2.24
HIPK4Q8NE63 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.08□□□□□ -2.24
HIPK4Q8NE63 RNU6-267P-201ENST00000516714 103 ntBASIC1.08□□□□□ -2.24
HIPK4Q8NE63 MIR3124-201ENST00000582636 67 ntBASIC1.08□□□□□ -2.24
HIPK4Q8NE63 MIR6078-201ENST00000611069 100 ntBASIC1.08□□□□□ -2.24
HIPK4Q8NE63 RNY1P10-201ENST00000363268 113 ntBASIC1.07□□□□□ -2.24
HIPK4Q8NE63 AL606490.4-201ENST00000423117 127 ntBASIC1.07□□□□□ -2.24
HIPK4Q8NE63 RNU6-75P-201ENST00000515944 104 ntBASIC1.07□□□□□ -2.24
HIPK4Q8NE63 RNU6ATAC17P-201ENST00000516074 71 ntBASIC1.07□□□□□ -2.24
HIPK4Q8NE63 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.07□□□□□ -2.24
HIPK4Q8NE63 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.07□□□□□ -2.24
HIPK4Q8NE63 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.07□□□□□ -2.24
HIPK4Q8NE63 RNU6-497P-201ENST00000365316 104 ntBASIC1.06□□□□□ -2.24
HIPK4Q8NE63 RNU6-524P-201ENST00000384270 107 ntBASIC1.06□□□□□ -2.24
HIPK4Q8NE63 RNU6-466P-201ENST00000391224 103 ntBASIC1.06□□□□□ -2.24
HIPK4Q8NE63 SNORD99-201ENST00000408612 74 ntBASIC1.06□□□□□ -2.24
HIPK4Q8NE63 MIR3612-201ENST00000579753 87 ntBASIC1.06□□□□□ -2.24
HIPK4Q8NE63 AC062037.1-201ENST00000605302 128 ntBASIC1.06□□□□□ -2.24
HIPK4Q8NE63 snoU13.31-201ENST00000607291 104 ntBASIC1.06□□□□□ -2.24
HIPK4Q8NE63 RNA5SP117-201ENST00000365294 118 ntBASIC1.05□□□□□ -2.24
HIPK4Q8NE63 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
HIPK4Q8NE63 MIR450A2-201ENST00000385022 100 ntBASIC1.05□□□□□ -2.24
HIPK4Q8NE63 MIR644A-201ENST00000385262 94 ntBASIC1.05□□□□□ -2.24
HIPK4Q8NE63 AC244098.3-201ENST00000424803 96 ntBASIC1.05□□□□□ -2.24
HIPK4Q8NE63 RNU6-1265P-201ENST00000516342 103 ntBASIC1.05□□□□□ -2.24
HIPK4Q8NE63 TRDV1-202ENST00000621643 102 ntBASIC1.05□□□□□ -2.24
HIPK4Q8NE63 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.04□□□□□ -2.24
HIPK4Q8NE63 MIR494-201ENST00000349529 81 ntBASIC1.03□□□□□ -2.24
HIPK4Q8NE63 RNU6-633P-201ENST00000362612 103 ntBASIC1.03□□□□□ -2.24
HIPK4Q8NE63 Y_RNA.221-201ENST00000364248 96 ntBASIC1.03□□□□□ -2.24
HIPK4Q8NE63 SNORD115-27-201ENST00000364430 82 ntBASIC1.03□□□□□ -2.24
HIPK4Q8NE63 MIR1302-4-201ENST00000408701 150 ntBASIC1.03□□□□□ -2.24
HIPK4Q8NE63 AC011195.1-201ENST00000578177 177 ntBASIC1.03□□□□□ -2.24
HIPK4Q8NE63 Y_RNA.4-201ENST00000362333 112 ntBASIC1.02□□□□□ -2.25
HIPK4Q8NE63 Y_RNA.191-201ENST00000363972 113 ntBASIC1.02□□□□□ -2.25
HIPK4Q8NE63 Y_RNA.327-201ENST00000365201 102 ntBASIC1.02□□□□□ -2.25
HIPK4Q8NE63 RNY4P29-201ENST00000410801 97 ntBASIC1.02□□□□□ -2.25
HIPK4Q8NE63 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.02□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 319.3 ms