Protein–RNA interactions for Protein: Q8N9H8

EXD3, Exonuclease mut-7 homolog, humanhuman

Predictions only

Length 876 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXD3Q8N9H8 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.78□□□□□ -2.28
EXD3Q8N9H8 Y_RNA.10-201ENST00000362371 110 ntBASIC0.77□□□□□ -2.29
EXD3Q8N9H8 RNU6-1107P-201ENST00000364817 104 ntBASIC0.77□□□□□ -2.29
EXD3Q8N9H8 MIR635-201ENST00000384830 98 ntBASIC0.77□□□□□ -2.29
EXD3Q8N9H8 MIR34C-201ENST00000384831 77 ntBASIC0.77□□□□□ -2.29
EXD3Q8N9H8 RNU6-679P-201ENST00000391003 106 ntBASIC0.77□□□□□ -2.29
EXD3Q8N9H8 MIR1302-5-201ENST00000408164 150 ntBASIC0.77□□□□□ -2.29
EXD3Q8N9H8 RNA5SP193-201ENST00000410353 107 ntBASIC0.77□□□□□ -2.29
EXD3Q8N9H8 RNA5SP222-201ENST00000411039 105 ntBASIC0.77□□□□□ -2.29
EXD3Q8N9H8 MIR4694-201ENST00000578534 80 ntBASIC0.77□□□□□ -2.29
EXD3Q8N9H8 MIR3612-201ENST00000579753 87 ntBASIC0.77□□□□□ -2.29
EXD3Q8N9H8 AL442128.1-201ENST00000615151 90 ntBASIC0.77□□□□□ -2.29
EXD3Q8N9H8 MIR6129-201ENST00000616087 109 ntBASIC0.77□□□□□ -2.29
EXD3Q8N9H8 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC0.77□□□□□ -2.29
EXD3Q8N9H8 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
EXD3Q8N9H8 RNA5SP257-201ENST00000363023 116 ntBASIC0.76□□□□□ -2.29
EXD3Q8N9H8 RNU4-36P-201ENST00000364294 144 ntBASIC0.76□□□□□ -2.29
EXD3Q8N9H8 Y_RNA.323-201ENST00000365157 109 ntBASIC0.76□□□□□ -2.29
EXD3Q8N9H8 RNU6-571P-201ENST00000384128 107 ntBASIC0.76□□□□□ -2.29
EXD3Q8N9H8 RNU6-1113P-201ENST00000384348 107 ntBASIC0.76□□□□□ -2.29
EXD3Q8N9H8 MIR605-201ENST00000385078 83 ntBASIC0.76□□□□□ -2.29
EXD3Q8N9H8 RNU6-1307P-201ENST00000391012 103 ntBASIC0.76□□□□□ -2.29
EXD3Q8N9H8 AC244098.3-201ENST00000424803 96 ntBASIC0.76□□□□□ -2.29
EXD3Q8N9H8 SPINT5P-201ENST00000448174 155 ntBASIC0.76□□□□□ -2.29
EXD3Q8N9H8 RNU6-90P-201ENST00000606352 106 ntBASIC0.76□□□□□ -2.29
EXD3Q8N9H8 MIR8087-201ENST00000612745 78 ntBASIC0.76□□□□□ -2.29
EXD3Q8N9H8 HSBP1P2-201ENST00000299671 229 ntBASIC0.75□□□□□ -2.29
EXD3Q8N9H8 RNY3P2-201ENST00000362918 102 ntBASIC0.75□□□□□ -2.29
EXD3Q8N9H8 RNU6-1290P-201ENST00000362957 109 ntBASIC0.75□□□□□ -2.29
EXD3Q8N9H8 RNU6-1014P-201ENST00000383940 103 ntBASIC0.75□□□□□ -2.29
EXD3Q8N9H8 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.75□□□□□ -2.29
EXD3Q8N9H8 RNU6-351P-201ENST00000516097 100 ntBASIC0.75□□□□□ -2.29
EXD3Q8N9H8 AC141557.1-201ENST00000540982 400 ntBASIC0.75□□□□□ -2.29
EXD3Q8N9H8 AC138869.1-201ENST00000568623 124 ntBASIC0.75□□□□□ -2.29
EXD3Q8N9H8 MIR6835-201ENST00000621552 64 ntBASIC0.75□□□□□ -2.29
EXD3Q8N9H8 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
EXD3Q8N9H8 SNORD114-2-201ENST00000363953 78 ntBASIC0.74□□□□□ -2.29
EXD3Q8N9H8 RNU6-1325P-201ENST00000364905 105 ntBASIC0.74□□□□□ -2.29
EXD3Q8N9H8 Y_RNA.377-201ENST00000365644 108 ntBASIC0.74□□□□□ -2.29
EXD3Q8N9H8 RNU6-1201P-201ENST00000384227 107 ntBASIC0.74□□□□□ -2.29
EXD3Q8N9H8 MIR508-201ENST00000384857 115 ntBASIC0.74□□□□□ -2.29
EXD3Q8N9H8 MIR146A-201ENST00000385201 99 ntBASIC0.74□□□□□ -2.29
EXD3Q8N9H8 PSMC1P5-201ENST00000512850 177 ntBASIC0.74□□□□□ -2.29
EXD3Q8N9H8 RNU6-291P-201ENST00000384720 107 ntBASIC0.73□□□□□ -2.29
EXD3Q8N9H8 MIR548G-201ENST00000408442 89 ntBASIC0.73□□□□□ -2.29
EXD3Q8N9H8 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.73□□□□□ -2.29
EXD3Q8N9H8 Y_RNA.709-201ENST00000516952 92 ntBASIC0.73□□□□□ -2.29
EXD3Q8N9H8 MIR4711-201ENST00000578274 70 ntBASIC0.73□□□□□ -2.29
EXD3Q8N9H8 MIR4653-201ENST00000585107 83 ntBASIC0.73□□□□□ -2.29
EXD3Q8N9H8 uc_338.16-201ENST00000621804 95 ntBASIC0.73□□□□□ -2.29
EXD3Q8N9H8 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.73□□□□□ -2.29
EXD3Q8N9H8 MIR6866-201ENST00000638146 69 ntBASIC0.73□□□□□ -2.29
EXD3Q8N9H8 RNU6-832P-201ENST00000363319 107 ntBASIC0.72□□□□□ -2.29
EXD3Q8N9H8 RNU6-1229P-201ENST00000364295 107 ntBASIC0.72□□□□□ -2.29
EXD3Q8N9H8 SNORA36.2-201ENST00000384004 127 ntBASIC0.72□□□□□ -2.29
EXD3Q8N9H8 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.72□□□□□ -2.29
EXD3Q8N9H8 BX276092.1-201ENST00000427368 251 ntBASIC0.72□□□□□ -2.29
EXD3Q8N9H8 RNU6-589P-201ENST00000516485 107 ntBASIC0.72□□□□□ -2.29
EXD3Q8N9H8 RNA5SP395-201ENST00000516567 118 ntBASIC0.72□□□□□ -2.29
EXD3Q8N9H8 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.72□□□□□ -2.29
EXD3Q8N9H8 MIR330-201ENST00000362196 94 ntBASIC0.71□□□□□ -2.3
EXD3Q8N9H8 MIR18A-201ENST00000362310 71 ntBASIC0.71□□□□□ -2.3
EXD3Q8N9H8 RNU6-170P-201ENST00000362832 104 ntBASIC0.71□□□□□ -2.3
EXD3Q8N9H8 SNORD45B-201ENST00000364617 72 ntBASIC0.71□□□□□ -2.3
EXD3Q8N9H8 RNU6-716P-201ENST00000365621 103 ntBASIC0.71□□□□□ -2.3
EXD3Q8N9H8 MIR577-201ENST00000385196 96 ntBASIC0.71□□□□□ -2.3
EXD3Q8N9H8 MIR1197-201ENST00000408818 88 ntBASIC0.71□□□□□ -2.3
EXD3Q8N9H8 Y_RNA.659-201ENST00000515994 113 ntBASIC0.71□□□□□ -2.3
EXD3Q8N9H8 RNA5SP476-201ENST00000516613 103 ntBASIC0.71□□□□□ -2.3
EXD3Q8N9H8 Y_RNA.342-201ENST00000365352 113 ntBASIC0.7□□□□□ -2.3
EXD3Q8N9H8 SNRPGP12-201ENST00000449481 213 ntBASIC0.7□□□□□ -2.3
EXD3Q8N9H8 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.7□□□□□ -2.3
EXD3Q8N9H8 SNORA31.14-201ENST00000516728 116 ntBASIC0.7□□□□□ -2.3
EXD3Q8N9H8 Y_RNA.78-201ENST00000362970 110 ntBASIC0.69□□□□□ -2.3
EXD3Q8N9H8 RNA5SP62-201ENST00000363457 110 ntBASIC0.69□□□□□ -2.3
EXD3Q8N9H8 RNU6-1099P-201ENST00000363533 107 ntBASIC0.69□□□□□ -2.3
EXD3Q8N9H8 RNU6-1125P-201ENST00000363601 107 ntBASIC0.69□□□□□ -2.3
EXD3Q8N9H8 Y_RNA.163-201ENST00000363702 113 ntBASIC0.69□□□□□ -2.3
EXD3Q8N9H8 RNU6-480P-201ENST00000384332 107 ntBASIC0.69□□□□□ -2.3
EXD3Q8N9H8 AC092628.1-201ENST00000436250 252 ntBASIC0.69□□□□□ -2.3
EXD3Q8N9H8 RNU6-850P-201ENST00000516934 103 ntBASIC0.69□□□□□ -2.3
EXD3Q8N9H8 MIR3678-201ENST00000578455 94 ntBASIC0.69□□□□□ -2.3
EXD3Q8N9H8 MIR4439-201ENST00000583746 80 ntBASIC0.69□□□□□ -2.3
EXD3Q8N9H8 Y_RNA.32-201ENST00000362589 110 ntBASIC0.68□□□□□ -2.3
EXD3Q8N9H8 Y_RNA.96-201ENST00000363092 109 ntBASIC0.68□□□□□ -2.3
EXD3Q8N9H8 Y_RNA.601-201ENST00000410500 113 ntBASIC0.68□□□□□ -2.3
EXD3Q8N9H8 AL353813.1-201ENST00000440700 253 ntBASIC0.68□□□□□ -2.3
EXD3Q8N9H8 RNU6-919P-201ENST00000516731 104 ntBASIC0.68□□□□□ -2.3
EXD3Q8N9H8 RNU6-1006P-201ENST00000516998 103 ntBASIC0.68□□□□□ -2.3
EXD3Q8N9H8 Y_RNA.567-201ENST00000384736 106 ntBASIC0.67□□□□□ -2.3
EXD3Q8N9H8 MIR140-201ENST00000385282 100 ntBASIC0.67□□□□□ -2.3
EXD3Q8N9H8 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.67□□□□□ -2.3
EXD3Q8N9H8 RNA5SP347-201ENST00000362445 119 ntBASIC0.66□□□□□ -2.3
EXD3Q8N9H8 MIR644A-201ENST00000385262 94 ntBASIC0.66□□□□□ -2.3
EXD3Q8N9H8 SNORD63B-201ENST00000411005 70 ntBASIC0.66□□□□□ -2.3
EXD3Q8N9H8 AL606490.4-201ENST00000423117 127 ntBASIC0.66□□□□□ -2.3
EXD3Q8N9H8 AC098934.3-201ENST00000430450 190 ntBASIC0.66□□□□□ -2.3
EXD3Q8N9H8 AC097635.1-201ENST00000450678 155 ntBASIC0.66□□□□□ -2.3
EXD3Q8N9H8 MIR4639-201ENST00000584938 69 ntBASIC0.66□□□□□ -2.3
EXD3Q8N9H8 Y_RNA.57-201ENST00000362806 113 ntBASIC0.65□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 221.5 ms