Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 AC008267.6-201ENST00000441664 139 ntBASIC0.39□□□□□ -2.35
RTL3Q8N8U3 Y_RNA.649-201ENST00000459077 103 ntBASIC0.39□□□□□ -2.35
RTL3Q8N8U3 SCARNA16.5-201ENST00000517114 183 ntBASIC0.39□□□□□ -2.35
RTL3Q8N8U3 AC007012.1-201ENST00000567192 175 ntBASIC0.39□□□□□ -2.35
RTL3Q8N8U3 AC138869.1-201ENST00000568623 124 ntBASIC0.39□□□□□ -2.35
RTL3Q8N8U3 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.39□□□□□ -2.35
RTL3Q8N8U3 AC092634.7-201ENST00000621022 103 ntBASIC0.39□□□□□ -2.35
RTL3Q8N8U3 MIR924-201ENST00000638017 53 ntBASIC0.39□□□□□ -2.35
RTL3Q8N8U3 SNORD118-201ENST00000363593 134 ntBASIC0.38□□□□□ -2.35
RTL3Q8N8U3 Y_RNA.377-201ENST00000365644 108 ntBASIC0.38□□□□□ -2.35
RTL3Q8N8U3 RNU6-409P-201ENST00000384114 104 ntBASIC0.38□□□□□ -2.35
RTL3Q8N8U3 Y_RNA.507-201ENST00000384500 99 ntBASIC0.38□□□□□ -2.35
RTL3Q8N8U3 BX276092.1-201ENST00000427368 251 ntBASIC0.38□□□□□ -2.35
RTL3Q8N8U3 TRAJ51-201ENST00000504127 63 ntBASIC0.38□□□□□ -2.35
RTL3Q8N8U3 AC132825.6-201ENST00000638861 357 ntBASIC0.38□□□□□ -2.35
RTL3Q8N8U3 Y_RNA.309-201ENST00000365046 111 ntBASIC0.37□□□□□ -2.35
RTL3Q8N8U3 RNU6-1201P-201ENST00000384227 107 ntBASIC0.37□□□□□ -2.35
RTL3Q8N8U3 Y_RNA.549-201ENST00000384657 102 ntBASIC0.37□□□□□ -2.35
RTL3Q8N8U3 Y_RNA.567-201ENST00000384736 106 ntBASIC0.37□□□□□ -2.35
RTL3Q8N8U3 MIR518A1-201ENST00000385068 85 ntBASIC0.37□□□□□ -2.35
RTL3Q8N8U3 RNU6-816P-201ENST00000390914 107 ntBASIC0.37□□□□□ -2.35
RTL3Q8N8U3 RNU6-1268P-201ENST00000391214 107 ntBASIC0.37□□□□□ -2.35
RTL3Q8N8U3 RNU6-1239P-201ENST00000391310 107 ntBASIC0.37□□□□□ -2.35
RTL3Q8N8U3 SNORA7.5-201ENST00000410672 110 ntBASIC0.37□□□□□ -2.35
RTL3Q8N8U3 SNORA40.8-201ENST00000411034 126 ntBASIC0.37□□□□□ -2.35
RTL3Q8N8U3 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.37□□□□□ -2.35
RTL3Q8N8U3 AC097635.1-201ENST00000450678 155 ntBASIC0.37□□□□□ -2.35
RTL3Q8N8U3 SNORA68.3-201ENST00000515906 83 ntBASIC0.37□□□□□ -2.35
RTL3Q8N8U3 AL670379.3-201ENST00000605040 251 ntBASIC0.37□□□□□ -2.35
RTL3Q8N8U3 AC243829.6-201ENST00000612652 106 ntBASIC0.37□□□□□ -2.35
RTL3Q8N8U3 RNU6-170P-201ENST00000362832 104 ntBASIC0.36□□□□□ -2.35
RTL3Q8N8U3 SNORD38.1-201ENST00000363863 68 ntBASIC0.36□□□□□ -2.35
RTL3Q8N8U3 Y_RNA.261-201ENST00000364631 102 ntBASIC0.36□□□□□ -2.35
RTL3Q8N8U3 Y_RNA.281-201ENST00000364774 94 ntBASIC0.36□□□□□ -2.35
RTL3Q8N8U3 SNORA50A-201ENST00000384225 134 ntBASIC0.36□□□□□ -2.35
RTL3Q8N8U3 RNU6-22P-201ENST00000384355 107 ntBASIC0.36□□□□□ -2.35
RTL3Q8N8U3 MIR635-201ENST00000384830 98 ntBASIC0.36□□□□□ -2.35
RTL3Q8N8U3 MIR548A3-201ENST00000385297 97 ntBASIC0.36□□□□□ -2.35
RTL3Q8N8U3 RNU6-1168P-201ENST00000390831 104 ntBASIC0.36□□□□□ -2.35
RTL3Q8N8U3 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.36□□□□□ -2.35
RTL3Q8N8U3 AL365222.1-201ENST00000614661 98 ntBASIC0.36□□□□□ -2.35
RTL3Q8N8U3 AC244669.1-204ENST00000621564 178 ntBASIC0.36□□□□□ -2.35
RTL3Q8N8U3 Y_RNA.35-201ENST00000362601 101 ntBASIC0.35□□□□□ -2.35
RTL3Q8N8U3 RNA5SP403-201ENST00000363598 108 ntBASIC0.35□□□□□ -2.35
RTL3Q8N8U3 Y_RNA.247-201ENST00000364500 92 ntBASIC0.35□□□□□ -2.35
RTL3Q8N8U3 RNA5SP205-201ENST00000364653 136 ntBASIC0.35□□□□□ -2.35
RTL3Q8N8U3 SNORD38.2-201ENST00000384470 69 ntBASIC0.35□□□□□ -2.35
RTL3Q8N8U3 RNU6-1117P-201ENST00000384525 104 ntBASIC0.35□□□□□ -2.35
RTL3Q8N8U3 MIR548A1-201ENST00000385041 97 ntBASIC0.35□□□□□ -2.35
RTL3Q8N8U3 SNORD63B-201ENST00000411005 70 ntBASIC0.35□□□□□ -2.35
RTL3Q8N8U3 RNA5SP268-201ENST00000516828 124 ntBASIC0.35□□□□□ -2.35
RTL3Q8N8U3 RNU6-850P-201ENST00000516934 103 ntBASIC0.35□□□□□ -2.35
RTL3Q8N8U3 MIR4694-201ENST00000578534 80 ntBASIC0.35□□□□□ -2.35
RTL3Q8N8U3 AL442128.1-201ENST00000615151 90 ntBASIC0.35□□□□□ -2.35
RTL3Q8N8U3 AC090625.1-201ENST00000357130 210 ntBASIC0.34□□□□□ -2.36
RTL3Q8N8U3 MIRLET7D-201ENST00000362263 87 ntBASIC0.34□□□□□ -2.36
RTL3Q8N8U3 RNU6-1260P-201ENST00000362944 107 ntBASIC0.34□□□□□ -2.36
RTL3Q8N8U3 Y_RNA.155-201ENST00000363632 101 ntBASIC0.34□□□□□ -2.36
RTL3Q8N8U3 RNA5SP457-201ENST00000363657 124 ntBASIC0.34□□□□□ -2.36
RTL3Q8N8U3 Y_RNA.173-201ENST00000363776 113 ntBASIC0.34□□□□□ -2.36
RTL3Q8N8U3 RNU6-1229P-201ENST00000364295 107 ntBASIC0.34□□□□□ -2.36
RTL3Q8N8U3 Y_RNA.342-201ENST00000365352 113 ntBASIC0.34□□□□□ -2.36
RTL3Q8N8U3 VTRNA1-3-201ENST00000365645 89 ntBASIC0.34□□□□□ -2.36
RTL3Q8N8U3 MIR577-201ENST00000385196 96 ntBASIC0.34□□□□□ -2.36
RTL3Q8N8U3 RNU6-479P-201ENST00000516348 105 ntBASIC0.34□□□□□ -2.36
RTL3Q8N8U3 RNU6-406P-201ENST00000516470 107 ntBASIC0.34□□□□□ -2.36
RTL3Q8N8U3 RNA5SP134-201ENST00000516492 96 ntBASIC0.34□□□□□ -2.36
RTL3Q8N8U3 RNU7-161P-201ENST00000517289 62 ntBASIC0.34□□□□□ -2.36
RTL3Q8N8U3 AC068339.1-201ENST00000526965 141 ntBASIC0.34□□□□□ -2.36
RTL3Q8N8U3 MIR7107-201ENST00000611489 80 ntBASIC0.34□□□□□ -2.36
RTL3Q8N8U3 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC0.34□□□□□ -2.36
RTL3Q8N8U3 AL512310.12-203ENST00000640543 90 ntBASIC0.34□□□□□ -2.36
RTL3Q8N8U3 AC091304.10-201ENST00000641554 121 ntBASIC0.34□□□□□ -2.36
RTL3Q8N8U3 SNORD115-24-201ENST00000363528 82 ntBASIC0.33□□□□□ -2.36
RTL3Q8N8U3 U8.6-201ENST00000364939 135 ntBASIC0.33□□□□□ -2.36
RTL3Q8N8U3 Y_RNA.323-201ENST00000365157 109 ntBASIC0.33□□□□□ -2.36
RTL3Q8N8U3 MIR548G-201ENST00000408442 89 ntBASIC0.33□□□□□ -2.36
RTL3Q8N8U3 SNORA25.18-201ENST00000607153 114 ntBASIC0.33□□□□□ -2.36
RTL3Q8N8U3 RNU6-834P-201ENST00000362367 110 ntBASIC0.32□□□□□ -2.36
RTL3Q8N8U3 SNORD44.1-201ENST00000363202 61 ntBASIC0.32□□□□□ -2.36
RTL3Q8N8U3 RNU6-726P-201ENST00000364680 107 ntBASIC0.32□□□□□ -2.36
RTL3Q8N8U3 RNU6-1126P-201ENST00000384002 107 ntBASIC0.32□□□□□ -2.36
RTL3Q8N8U3 RNU6-880P-201ENST00000384526 107 ntBASIC0.32□□□□□ -2.36
RTL3Q8N8U3 MIR599-201ENST00000385069 95 ntBASIC0.32□□□□□ -2.36
RTL3Q8N8U3 SNORD71-201ENST00000411292 86 ntBASIC0.32□□□□□ -2.36
RTL3Q8N8U3 RNU7-106P-201ENST00000459514 67 ntBASIC0.32□□□□□ -2.36
RTL3Q8N8U3 RNU6-863P-201ENST00000515989 104 ntBASIC0.32□□□□□ -2.36
RTL3Q8N8U3 RNU6-62P-201ENST00000516526 102 ntBASIC0.32□□□□□ -2.36
RTL3Q8N8U3 MIR5009-201ENST00000578736 100 ntBASIC0.32□□□□□ -2.36
RTL3Q8N8U3 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.32□□□□□ -2.36
RTL3Q8N8U3 MIR330-201ENST00000362196 94 ntBASIC0.31□□□□□ -2.36
RTL3Q8N8U3 Y_RNA.49-201ENST00000362714 112 ntBASIC0.31□□□□□ -2.36
RTL3Q8N8U3 RNY3P2-201ENST00000362918 102 ntBASIC0.31□□□□□ -2.36
RTL3Q8N8U3 RNU6-1144P-201ENST00000384247 104 ntBASIC0.31□□□□□ -2.36
RTL3Q8N8U3 SNORD116-21-201ENST00000384507 92 ntBASIC0.31□□□□□ -2.36
RTL3Q8N8U3 SNORD41.1-201ENST00000391000 69 ntBASIC0.31□□□□□ -2.36
RTL3Q8N8U3 RNU7-195P-201ENST00000458793 62 ntBASIC0.31□□□□□ -2.36
RTL3Q8N8U3 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.31□□□□□ -2.36
RTL3Q8N8U3 RNU6-1265P-201ENST00000516342 103 ntBASIC0.31□□□□□ -2.36
RTL3Q8N8U3 RNU6-90P-201ENST00000606352 106 ntBASIC0.31□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 173.9 ms