Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 AC015818.7-201ENST00000428754 109 ntBASIC1.87□□□□□ -2.11
DEPDC4Q8N2C3 RNU7-153P-201ENST00000516455 62 ntBASIC1.87□□□□□ -2.11
DEPDC4Q8N2C3 MIR4804-201ENST00000581683 73 ntBASIC1.87□□□□□ -2.11
DEPDC4Q8N2C3 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.87□□□□□ -2.11
DEPDC4Q8N2C3 RNU6-624P-201ENST00000363411 107 ntBASIC1.86□□□□□ -2.11
DEPDC4Q8N2C3 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.86□□□□□ -2.11
DEPDC4Q8N2C3 MIR7111-201ENST00000619751 72 ntBASIC1.86□□□□□ -2.11
DEPDC4Q8N2C3 MIR1-1-201ENST00000362147 71 ntBASIC1.85□□□□□ -2.11
DEPDC4Q8N2C3 RNU6-315P-201ENST00000362666 107 ntBASIC1.85□□□□□ -2.11
DEPDC4Q8N2C3 RNU6-957P-201ENST00000363652 99 ntBASIC1.85□□□□□ -2.11
DEPDC4Q8N2C3 Y_RNA.226-201ENST00000364337 114 ntBASIC1.85□□□□□ -2.11
DEPDC4Q8N2C3 Y_RNA.244-201ENST00000364484 109 ntBASIC1.85□□□□□ -2.11
DEPDC4Q8N2C3 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.85□□□□□ -2.11
DEPDC4Q8N2C3 AC067940.1-201ENST00000458411 300 ntBASIC1.85□□□□□ -2.11
DEPDC4Q8N2C3 RNU6-977P-201ENST00000516411 103 ntBASIC1.85□□□□□ -2.11
DEPDC4Q8N2C3 AC019288.1-201ENST00000557918 224 ntBASIC1.85□□□□□ -2.11
DEPDC4Q8N2C3 MIR4796-201ENST00000580742 81 ntBASIC1.85□□□□□ -2.11
DEPDC4Q8N2C3 MIR3064-201ENST00000581130 66 ntBASIC1.85□□□□□ -2.11
DEPDC4Q8N2C3 AC104996.3-201ENST00000590718 94 ntBASIC1.85□□□□□ -2.11
DEPDC4Q8N2C3 SNORA26.9-201ENST00000391322 122 ntBASIC1.84□□□□□ -2.11
DEPDC4Q8N2C3 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
DEPDC4Q8N2C3 RNU7-56P-201ENST00000458744 62 ntBASIC1.84□□□□□ -2.11
DEPDC4Q8N2C3 RNU7-102P-201ENST00000458948 62 ntBASIC1.84□□□□□ -2.11
DEPDC4Q8N2C3 Y_RNA.94-201ENST00000363068 106 ntBASIC1.83□□□□□ -2.12
DEPDC4Q8N2C3 SNORA64-201ENST00000384674 134 ntBASIC1.83□□□□□ -2.12
DEPDC4Q8N2C3 MIR100-201ENST00000385259 80 ntBASIC1.83□□□□□ -2.12
DEPDC4Q8N2C3 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.83□□□□□ -2.12
DEPDC4Q8N2C3 MIR1827-201ENST00000408549 66 ntBASIC1.83□□□□□ -2.12
DEPDC4Q8N2C3 RNU6-557P-201ENST00000516842 110 ntBASIC1.83□□□□□ -2.12
DEPDC4Q8N2C3 RNU6-295P-201ENST00000516901 104 ntBASIC1.83□□□□□ -2.12
DEPDC4Q8N2C3 MIR4712-201ENST00000583750 82 ntBASIC1.83□□□□□ -2.12
DEPDC4Q8N2C3 RNU6-291P-201ENST00000384720 107 ntBASIC1.82□□□□□ -2.12
DEPDC4Q8N2C3 RNU6-535P-201ENST00000384722 107 ntBASIC1.82□□□□□ -2.12
DEPDC4Q8N2C3 MIR518E-201ENST00000385252 88 ntBASIC1.82□□□□□ -2.12
DEPDC4Q8N2C3 RNU6-129P-201ENST00000391022 107 ntBASIC1.82□□□□□ -2.12
DEPDC4Q8N2C3 RNU1-119P-201ENST00000391122 165 ntBASIC1.82□□□□□ -2.12
DEPDC4Q8N2C3 RNU6-1053P-201ENST00000515930 101 ntBASIC1.82□□□□□ -2.12
DEPDC4Q8N2C3 MIR4498-201ENST00000577599 66 ntBASIC1.82□□□□□ -2.12
DEPDC4Q8N2C3 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.82□□□□□ -2.12
DEPDC4Q8N2C3 SNORA25-201ENST00000384384 134 ntBASIC1.81□□□□□ -2.12
DEPDC4Q8N2C3 Y_RNA.491-201ENST00000384417 107 ntBASIC1.81□□□□□ -2.12
DEPDC4Q8N2C3 AC002429.1-201ENST00000437672 148 ntBASIC1.81□□□□□ -2.12
DEPDC4Q8N2C3 MIR4781-201ENST00000585250 76 ntBASIC1.81□□□□□ -2.12
DEPDC4Q8N2C3 TRDV1-202ENST00000621643 102 ntBASIC1.81□□□□□ -2.12
DEPDC4Q8N2C3 RNU6-132P-201ENST00000383863 107 ntBASIC1.8□□□□□ -2.12
DEPDC4Q8N2C3 MIR599-201ENST00000385069 95 ntBASIC1.8□□□□□ -2.12
DEPDC4Q8N2C3 RNA5SP292-201ENST00000390974 118 ntBASIC1.8□□□□□ -2.12
DEPDC4Q8N2C3 MIR1287-201ENST00000408492 90 ntBASIC1.8□□□□□ -2.12
DEPDC4Q8N2C3 AC244505.6-201ENST00000452829 130 ntBASIC1.8□□□□□ -2.12
DEPDC4Q8N2C3 Y_RNA.660-201ENST00000516002 120 ntBASIC1.8□□□□□ -2.12
DEPDC4Q8N2C3 SNORA18.5-201ENST00000516616 101 ntBASIC1.8□□□□□ -2.12
DEPDC4Q8N2C3 AC008608.1-201ENST00000603910 127 ntBASIC1.8□□□□□ -2.12
DEPDC4Q8N2C3 MIR222-201ENST00000384992 110 ntBASIC1.79□□□□□ -2.12
DEPDC4Q8N2C3 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
DEPDC4Q8N2C3 FGF7P7-201ENST00000514120 227 ntBASIC1.79□□□□□ -2.12
DEPDC4Q8N2C3 MIR3122-201ENST00000577243 73 ntBASIC1.79□□□□□ -2.12
DEPDC4Q8N2C3 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.79□□□□□ -2.12
DEPDC4Q8N2C3 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
DEPDC4Q8N2C3 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
DEPDC4Q8N2C3 MTRNR2L2-201ENST00000604882 87 ntBASIC1.78□□□□□ -2.12
DEPDC4Q8N2C3 MIR4662A-201ENST00000637499 67 ntBASIC1.78□□□□□ -2.12
DEPDC4Q8N2C3 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
DEPDC4Q8N2C3 RNU1-17P-201ENST00000363022 152 ntBASIC1.77□□□□□ -2.13
DEPDC4Q8N2C3 Y_RNA.174-201ENST00000363781 105 ntBASIC1.77□□□□□ -2.13
DEPDC4Q8N2C3 RNU6-1265P-201ENST00000516342 103 ntBASIC1.77□□□□□ -2.13
DEPDC4Q8N2C3 MIR5089-201ENST00000580047 84 ntBASIC1.77□□□□□ -2.13
DEPDC4Q8N2C3 AL136317.1-201ENST00000612653 226 ntBASIC1.77□□□□□ -2.13
DEPDC4Q8N2C3 ZNF355P-201ENST00000427301 3216 ntBASIC1.77□□□□□ -2.13
DEPDC4Q8N2C3 SNORA63.2-201ENST00000362603 126 ntBASIC1.76□□□□□ -2.13
DEPDC4Q8N2C3 MIR520F-201ENST00000384824 87 ntBASIC1.76□□□□□ -2.13
DEPDC4Q8N2C3 MIR19B1-201ENST00000384829 87 ntBASIC1.76□□□□□ -2.13
DEPDC4Q8N2C3 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.76□□□□□ -2.13
DEPDC4Q8N2C3 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
DEPDC4Q8N2C3 SNORA25.9-201ENST00000365087 128 ntBASIC1.75□□□□□ -2.13
DEPDC4Q8N2C3 MIR583-201ENST00000384846 75 ntBASIC1.75□□□□□ -2.13
DEPDC4Q8N2C3 RNA5SP182-201ENST00000516064 82 ntBASIC1.75□□□□□ -2.13
DEPDC4Q8N2C3 RNU6-1110P-201ENST00000516462 101 ntBASIC1.75□□□□□ -2.13
DEPDC4Q8N2C3 Y_RNA.783-201ENST00000613546 102 ntBASIC1.75□□□□□ -2.13
DEPDC4Q8N2C3 RMST_2.1-201ENST00000617263 136 ntBASIC1.75□□□□□ -2.13
DEPDC4Q8N2C3 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.75□□□□□ -2.13
DEPDC4Q8N2C3 MIRLET7F1-201ENST00000362202 87 ntBASIC1.74□□□□□ -2.13
DEPDC4Q8N2C3 RNA5SP327-201ENST00000362494 101 ntBASIC1.74□□□□□ -2.13
DEPDC4Q8N2C3 RNA5SP245-201ENST00000364239 121 ntBASIC1.74□□□□□ -2.13
DEPDC4Q8N2C3 Y_RNA.221-201ENST00000364248 96 ntBASIC1.74□□□□□ -2.13
DEPDC4Q8N2C3 Y_RNA.239-201ENST00000364444 113 ntBASIC1.74□□□□□ -2.13
DEPDC4Q8N2C3 RNU6-1296P-201ENST00000383879 107 ntBASIC1.74□□□□□ -2.13
DEPDC4Q8N2C3 Y_RNA.596-201ENST00000410462 109 ntBASIC1.74□□□□□ -2.13
DEPDC4Q8N2C3 FABP5P4-201ENST00000437203 171 ntBASIC1.74□□□□□ -2.13
DEPDC4Q8N2C3 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.73□□□□□ -2.13
DEPDC4Q8N2C3 RNU6-664P-201ENST00000362381 107 ntBASIC1.73□□□□□ -2.13
DEPDC4Q8N2C3 RNU6-478P-201ENST00000363904 110 ntBASIC1.73□□□□□ -2.13
DEPDC4Q8N2C3 SNORA16.1-201ENST00000364597 132 ntBASIC1.73□□□□□ -2.13
DEPDC4Q8N2C3 RNU6-686P-201ENST00000364839 107 ntBASIC1.73□□□□□ -2.13
DEPDC4Q8N2C3 RNA5SP363-201ENST00000365072 115 ntBASIC1.73□□□□□ -2.13
DEPDC4Q8N2C3 SNORD101-201ENST00000384027 73 ntBASIC1.73□□□□□ -2.13
DEPDC4Q8N2C3 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
DEPDC4Q8N2C3 AL606490.4-201ENST00000423117 127 ntBASIC1.73□□□□□ -2.13
DEPDC4Q8N2C3 MIR6845-201ENST00000613182 61 ntBASIC1.73□□□□□ -2.13
DEPDC4Q8N2C3 uc_338.16-201ENST00000621804 95 ntBASIC1.73□□□□□ -2.13
DEPDC4Q8N2C3 RNU6-1094P-201ENST00000362416 104 ntBASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 183.5 ms