Protein–RNA interactions for Protein: Q86UV5

USP48, Ubiquitin carboxyl-terminal hydrolase 48, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP48Q86UV5 RNU6-787P-201ENST00000384032 107 ntBASIC1.66□□□□□ -2.14
USP48Q86UV5 RNU6-1124P-201ENST00000384169 107 ntBASIC1.66□□□□□ -2.14
USP48Q86UV5 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
USP48Q86UV5 RNU6-979P-201ENST00000383896 107 ntBASIC1.65□□□□□ -2.15
USP48Q86UV5 SNORD38.2-201ENST00000384470 69 ntBASIC1.65□□□□□ -2.15
USP48Q86UV5 MIR1255A-201ENST00000408338 113 ntBASIC1.65□□□□□ -2.15
USP48Q86UV5 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.65□□□□□ -2.15
USP48Q86UV5 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
USP48Q86UV5 Y_RNA.609-201ENST00000410669 89 ntBASIC1.64□□□□□ -2.15
USP48Q86UV5 BX276092.1-201ENST00000427368 251 ntBASIC1.64□□□□□ -2.15
USP48Q86UV5 SNORA25.16-201ENST00000516741 121 ntBASIC1.64□□□□□ -2.15
USP48Q86UV5 RNU6-850P-201ENST00000516934 103 ntBASIC1.64□□□□□ -2.15
USP48Q86UV5 Y_RNA.219-201ENST00000364232 113 ntBASIC1.63□□□□□ -2.15
USP48Q86UV5 RNU1-36P-201ENST00000365130 165 ntBASIC1.63□□□□□ -2.15
USP48Q86UV5 RNU6-934P-201ENST00000365154 107 ntBASIC1.63□□□□□ -2.15
USP48Q86UV5 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.63□□□□□ -2.15
USP48Q86UV5 RNU6-994P-201ENST00000410507 111 ntBASIC1.63□□□□□ -2.15
USP48Q86UV5 SNORD83.1-201ENST00000411362 77 ntBASIC1.63□□□□□ -2.15
USP48Q86UV5 AC002429.1-201ENST00000437672 148 ntBASIC1.63□□□□□ -2.15
USP48Q86UV5 RNU6-638P-201ENST00000516582 104 ntBASIC1.63□□□□□ -2.15
USP48Q86UV5 AC027335.2-201ENST00000624030 375 ntBASIC1.63□□□□□ -2.15
USP48Q86UV5 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
USP48Q86UV5 RNU6-1125P-201ENST00000363601 107 ntBASIC1.62□□□□□ -2.15
USP48Q86UV5 SNORD115-27-201ENST00000364430 82 ntBASIC1.62□□□□□ -2.15
USP48Q86UV5 RNU6-1276P-201ENST00000365372 104 ntBASIC1.62□□□□□ -2.15
USP48Q86UV5 RNU6-531P-201ENST00000516694 104 ntBASIC1.62□□□□□ -2.15
USP48Q86UV5 MIR5588-201ENST00000581890 63 ntBASIC1.62□□□□□ -2.15
USP48Q86UV5 AC023934.1-201ENST00000574529 2389 ntBASIC1.61□□□□□ -2.15
USP48Q86UV5 RNU6-633P-201ENST00000362612 103 ntBASIC1.61□□□□□ -2.15
USP48Q86UV5 Y_RNA.313-201ENST00000365095 103 ntBASIC1.61□□□□□ -2.15
USP48Q86UV5 RNU6-480P-201ENST00000384332 107 ntBASIC1.61□□□□□ -2.15
USP48Q86UV5 MIR1257-201ENST00000408490 117 ntBASIC1.61□□□□□ -2.15
USP48Q86UV5 AC015818.7-201ENST00000428754 109 ntBASIC1.61□□□□□ -2.15
USP48Q86UV5 AC087499.7-201ENST00000441958 109 ntBASIC1.61□□□□□ -2.15
USP48Q86UV5 Y_RNA.685-201ENST00000516532 108 ntBASIC1.61□□□□□ -2.15
USP48Q86UV5 RNA5SP395-201ENST00000516567 118 ntBASIC1.61□□□□□ -2.15
USP48Q86UV5 AC019288.1-201ENST00000557918 224 ntBASIC1.61□□□□□ -2.15
USP48Q86UV5 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.61□□□□□ -2.15
USP48Q86UV5 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
USP48Q86UV5 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
USP48Q86UV5 Y_RNA.36-201ENST00000362602 112 ntBASIC1.6□□□□□ -2.15
USP48Q86UV5 SNORA25.8-201ENST00000364831 128 ntBASIC1.6□□□□□ -2.15
USP48Q86UV5 SNORD93-201ENST00000408813 74 ntBASIC1.6□□□□□ -2.15
USP48Q86UV5 RNU7-185P-201ENST00000459215 60 ntBASIC1.6□□□□□ -2.15
USP48Q86UV5 AC004223.1-201ENST00000479840 271 ntBASIC1.6□□□□□ -2.15
USP48Q86UV5 AC068338.1-201ENST00000565567 176 ntBASIC1.6□□□□□ -2.15
USP48Q86UV5 MIR4771-2-201ENST00000577758 74 ntBASIC1.6□□□□□ -2.15
USP48Q86UV5 MIR4771-1-201ENST00000582617 74 ntBASIC1.6□□□□□ -2.15
USP48Q86UV5 RNU6-509P-201ENST00000363519 107 ntBASIC1.59□□□□□ -2.15
USP48Q86UV5 RNU6-571P-201ENST00000384128 107 ntBASIC1.59□□□□□ -2.15
USP48Q86UV5 MIR598-201ENST00000384868 97 ntBASIC1.59□□□□□ -2.15
USP48Q86UV5 RNU7-106P-201ENST00000459514 67 ntBASIC1.59□□□□□ -2.15
USP48Q86UV5 RNU7-171P-201ENST00000459581 62 ntBASIC1.59□□□□□ -2.15
USP48Q86UV5 RNU6-1223P-201ENST00000517124 104 ntBASIC1.59□□□□□ -2.15
USP48Q86UV5 MIR8066-201ENST00000617280 78 ntBASIC1.59□□□□□ -2.15
USP48Q86UV5 MIR548BB-201ENST00000626714 66 ntBASIC1.59□□□□□ -2.15
USP48Q86UV5 AC006160.2-201ENST00000637708 154 ntBASIC1.59□□□□□ -2.15
USP48Q86UV5 MIR548J-201ENST00000408833 112 ntBASIC1.58□□□□□ -2.16
USP48Q86UV5 Y_RNA.611-201ENST00000410682 108 ntBASIC1.58□□□□□ -2.16
USP48Q86UV5 RPS26P5-201ENST00000418544 335 ntBASIC1.58□□□□□ -2.16
USP48Q86UV5 AL161932.1-201ENST00000437408 146 ntBASIC1.58□□□□□ -2.16
USP48Q86UV5 AC067940.1-201ENST00000458411 300 ntBASIC1.58□□□□□ -2.16
USP48Q86UV5 RNU7-85P-201ENST00000458851 63 ntBASIC1.58□□□□□ -2.16
USP48Q86UV5 RNU7-40P-201ENST00000516397 64 ntBASIC1.58□□□□□ -2.16
USP48Q86UV5 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.58□□□□□ -2.16
USP48Q86UV5 MIR6788-201ENST00000618842 66 ntBASIC1.58□□□□□ -2.16
USP48Q86UV5 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.58□□□□□ -2.16
USP48Q86UV5 MIR26B-201ENST00000362251 77 ntBASIC1.57□□□□□ -2.16
USP48Q86UV5 RNU6-369P-201ENST00000362515 102 ntBASIC1.57□□□□□ -2.16
USP48Q86UV5 Y_RNA.57-201ENST00000362806 113 ntBASIC1.57□□□□□ -2.16
USP48Q86UV5 SNORD36A-201ENST00000362874 73 ntBASIC1.57□□□□□ -2.16
USP48Q86UV5 Y_RNA.437-201ENST00000384113 113 ntBASIC1.57□□□□□ -2.16
USP48Q86UV5 RNU6-242P-201ENST00000384359 107 ntBASIC1.57□□□□□ -2.16
USP48Q86UV5 MIR19B1-201ENST00000384829 87 ntBASIC1.57□□□□□ -2.16
USP48Q86UV5 MIR758-201ENST00000390227 88 ntBASIC1.57□□□□□ -2.16
USP48Q86UV5 SNORA40.6-201ENST00000391153 128 ntBASIC1.57□□□□□ -2.16
USP48Q86UV5 MIR3660-201ENST00000584845 100 ntBASIC1.57□□□□□ -2.16
USP48Q86UV5 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.57□□□□□ -2.16
USP48Q86UV5 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.57□□□□□ -2.16
USP48Q86UV5 MIR516A2-201ENST00000384888 90 ntBASIC1.56□□□□□ -2.16
USP48Q86UV5 MIR516A1-201ENST00000385033 90 ntBASIC1.56□□□□□ -2.16
USP48Q86UV5 SNORD4B-201ENST00000459083 72 ntBASIC1.56□□□□□ -2.16
USP48Q86UV5 MIR4666B-201ENST00000578142 81 ntBASIC1.56□□□□□ -2.16
USP48Q86UV5 AC013244.2-201ENST00000603396 103 ntBASIC1.56□□□□□ -2.16
USP48Q86UV5 MIR6767-201ENST00000637302 66 ntBASIC1.56□□□□□ -2.16
USP48Q86UV5 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.56□□□□□ -2.16
USP48Q86UV5 Y_RNA.205-201ENST00000364128 113 ntBASIC1.55□□□□□ -2.16
USP48Q86UV5 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.55□□□□□ -2.16
USP48Q86UV5 RNA5SP436-201ENST00000516020 115 ntBASIC1.55□□□□□ -2.16
USP48Q86UV5 MIR151B-201ENST00000584249 96 ntBASIC1.55□□□□□ -2.16
USP48Q86UV5 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.55□□□□□ -2.16
USP48Q86UV5 MIR1-1-201ENST00000362147 71 ntBASIC1.54□□□□□ -2.16
USP48Q86UV5 Y_RNA.13-201ENST00000362403 112 ntBASIC1.54□□□□□ -2.16
USP48Q86UV5 RNU6-403P-201ENST00000363163 104 ntBASIC1.54□□□□□ -2.16
USP48Q86UV5 RNU6-524P-201ENST00000384270 107 ntBASIC1.54□□□□□ -2.16
USP48Q86UV5 MIR125B2-201ENST00000385128 89 ntBASIC1.54□□□□□ -2.16
USP48Q86UV5 MIR100-201ENST00000385259 80 ntBASIC1.54□□□□□ -2.16
USP48Q86UV5 RNU4-58P-201ENST00000363192 141 ntBASIC1.53□□□□□ -2.16
USP48Q86UV5 MIR618-201ENST00000385287 98 ntBASIC1.53□□□□□ -2.16
USP48Q86UV5 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms