Protein–RNA interactions for Protein: Q86TS7

LINC00643, Putative UPF0730 protein encoded by LINC00643, humanhuman

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643Q86TS7 RNU6-518P-201ENST00000516056 96 ntBASIC-3.81□□□□□ -3.02
LINC00643Q86TS7 Y_RNA.169-201ENST00000363745 96 ntBASIC-3.82□□□□□ -3.02
LINC00643Q86TS7 Y_RNA.793-201ENST00000411222 111 ntBASIC-3.82□□□□□ -3.02
LINC00643Q86TS7 SNORD54-201ENST00000459159 67 ntBASIC-3.82□□□□□ -3.02
LINC00643Q86TS7 AC021443.1-201ENST00000604478 211 ntBASIC-3.82□□□□□ -3.02
LINC00643Q86TS7 SNORA63.2-201ENST00000362603 126 ntBASIC-3.83□□□□□ -3.02
LINC00643Q86TS7 RNU6-608P-201ENST00000383927 104 ntBASIC-3.83□□□□□ -3.02
LINC00643Q86TS7 RNU6-1177P-201ENST00000391058 104 ntBASIC-3.83□□□□□ -3.02
LINC00643Q86TS7 SNORA79-201ENST00000408376 140 ntBASIC-3.83□□□□□ -3.02
LINC00643Q86TS7 MTND1P1-201ENST00000445453 368 ntBASIC-3.83□□□□□ -3.02
LINC00643Q86TS7 RNU7-169P-201ENST00000459456 61 ntBASIC-3.83□□□□□ -3.02
LINC00643Q86TS7 RNU7-123P-201ENST00000515911 60 ntBASIC-3.83□□□□□ -3.02
LINC00643Q86TS7 AC018645.2-201ENST00000609151 472 ntBASIC-3.83□□□□□ -3.02
LINC00643Q86TS7 Y_RNA.182-201ENST00000363880 111 ntBASIC-3.84□□□□□ -3.02
LINC00643Q86TS7 RNU6-1016P-201ENST00000516689 94 ntBASIC-3.84□□□□□ -3.02
LINC00643Q86TS7 AC120024.2-201ENST00000576526 175 ntBASIC-3.84□□□□□ -3.02
LINC00643Q86TS7 Y_RNA.772-201ENST00000606692 102 ntBASIC-3.84□□□□□ -3.02
LINC00643Q86TS7 SNORD63-201ENST00000384262 68 ntBASIC-3.85□□□□□ -3.03
LINC00643Q86TS7 Y_RNA.560-201ENST00000384689 102 ntBASIC-3.85□□□□□ -3.03
LINC00643Q86TS7 RNY3P10-201ENST00000384764 102 ntBASIC-3.85□□□□□ -3.03
LINC00643Q86TS7 MIR628-201ENST00000385229 95 ntBASIC-3.85□□□□□ -3.03
LINC00643Q86TS7 RNU6-75P-201ENST00000515944 104 ntBASIC-3.85□□□□□ -3.03
LINC00643Q86TS7 AL138825.1-201ENST00000618587 192 ntBASIC-3.85□□□□□ -3.03
LINC00643Q86TS7 Y_RNA.176-201ENST00000363815 109 ntBASIC-3.86□□□□□ -3.03
LINC00643Q86TS7 Y_RNA.813-201ENST00000364639 102 ntBASIC-3.86□□□□□ -3.03
LINC00643Q86TS7 Y_RNA.286-201ENST00000364813 102 ntBASIC-3.86□□□□□ -3.03
LINC00643Q86TS7 Y_RNA.474-201ENST00000384341 102 ntBASIC-3.86□□□□□ -3.03
LINC00643Q86TS7 MT-TH-201ENST00000387441 69 ntBASIC-3.86□□□□□ -3.03
LINC00643Q86TS7 RNU6-307P-201ENST00000516743 106 ntBASIC-3.86□□□□□ -3.03
LINC00643Q86TS7 RNU6-566P-201ENST00000516790 107 ntBASIC-3.86□□□□□ -3.03
LINC00643Q86TS7 RNU6-1088P-201ENST00000516850 104 ntBASIC-3.86□□□□□ -3.03
LINC00643Q86TS7 RNU7-4P-201ENST00000516961 62 ntBASIC-3.86□□□□□ -3.03
LINC00643Q86TS7 AC138907.4-201ENST00000570107 226 ntBASIC-3.86□□□□□ -3.03
LINC00643Q86TS7 SNORA75-201ENST00000384158 137 ntBASIC-3.87□□□□□ -3.03
LINC00643Q86TS7 Y_RNA.605-201ENST00000410577 105 ntBASIC-3.87□□□□□ -3.03
LINC00643Q86TS7 RNU6-521P-201ENST00000516663 105 ntBASIC-3.87□□□□□ -3.03
LINC00643Q86TS7 RNU6-90P-201ENST00000606352 106 ntBASIC-3.87□□□□□ -3.03
LINC00643Q86TS7 U2.1-201ENST00000618978 145 ntBASIC-3.87□□□□□ -3.03
LINC00643Q86TS7 AL627230.5-201ENST00000619807 58 ntBASIC-3.87□□□□□ -3.03
LINC00643Q86TS7 MIRLET7F1-201ENST00000362202 87 ntBASIC-3.88□□□□□ -3.03
LINC00643Q86TS7 Y_RNA.80-201ENST00000362996 102 ntBASIC-3.88□□□□□ -3.03
LINC00643Q86TS7 Y_RNA.481-201ENST00000384373 102 ntBASIC-3.88□□□□□ -3.03
LINC00643Q86TS7 Y_RNA.501-201ENST00000384467 103 ntBASIC-3.88□□□□□ -3.03
LINC00643Q86TS7 Y_RNA.526-201ENST00000384572 110 ntBASIC-3.88□□□□□ -3.03
LINC00643Q86TS7 RNU2-38P-201ENST00000410856 79 ntBASIC-3.88□□□□□ -3.03
LINC00643Q86TS7 Y_RNA.708-201ENST00000516950 96 ntBASIC-3.88□□□□□ -3.03
LINC00643Q86TS7 AC048344.4-201ENST00000619744 527 ntBASIC-3.88□□□□□ -3.03
LINC00643Q86TS7 MIR548G-201ENST00000408442 89 ntBASIC-3.89□□□□□ -3.03
LINC00643Q86TS7 RNU2-72P-201ENST00000411175 163 ntBASIC-3.89□□□□□ -3.03
LINC00643Q86TS7 AL731563.1-201ENST00000442202 214 ntBASIC-3.89□□□□□ -3.03
LINC00643Q86TS7 SNORD116-25-201ENST00000516517 92 ntBASIC-3.89□□□□□ -3.03
LINC00643Q86TS7 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC-3.89□□□□□ -3.03
LINC00643Q86TS7 MIR3140-201ENST00000583685 90 ntBASIC-3.89□□□□□ -3.03
LINC00643Q86TS7 AL606534.2-204ENST00000635008 178 ntBASIC-3.89□□□□□ -3.03
LINC00643Q86TS7 RNY3P11-201ENST00000364153 102 ntBASIC-3.9□□□□□ -3.03
LINC00643Q86TS7 RNU6-1306P-201ENST00000365219 99 ntBASIC-3.9□□□□□ -3.03
LINC00643Q86TS7 Y_RNA.344-201ENST00000365381 112 ntBASIC-3.9□□□□□ -3.03
LINC00643Q86TS7 RNU6-937P-201ENST00000384325 106 ntBASIC-3.9□□□□□ -3.03
LINC00643Q86TS7 AL021921.1-201ENST00000442774 93 ntBASIC-3.9□□□□□ -3.03
LINC00643Q86TS7 MTND3P22-201ENST00000510932 243 ntBASIC-3.9□□□□□ -3.03
LINC00643Q86TS7 MIR4509-3-201ENST00000578671 94 ntBASIC-3.9□□□□□ -3.03
LINC00643Q86TS7 MIR4509-2-201ENST00000583920 94 ntBASIC-3.9□□□□□ -3.03
LINC00643Q86TS7 AC119751.7-201ENST00000600494 245 ntBASIC-3.9□□□□□ -3.03
LINC00643Q86TS7 SNORD113-5-201ENST00000607261 78 ntBASIC-3.9□□□□□ -3.03
LINC00643Q86TS7 Y_RNA.804-201ENST00000615262 101 ntBASIC-3.9□□□□□ -3.03
LINC00643Q86TS7 MIR4509-1-201ENST00000618224 94 ntBASIC-3.9□□□□□ -3.03
LINC00643Q86TS7 RNU6-978P-201ENST00000364371 103 ntBASIC-3.91□□□□□ -3.04
LINC00643Q86TS7 RNU6-563P-201ENST00000364872 108 ntBASIC-3.91□□□□□ -3.04
LINC00643Q86TS7 RNU6-240P-201ENST00000516098 97 ntBASIC-3.91□□□□□ -3.04
LINC00643Q86TS7 RNU6-911P-201ENST00000516523 104 ntBASIC-3.91□□□□□ -3.04
LINC00643Q86TS7 MIR4748-201ENST00000578076 82 ntBASIC-3.91□□□□□ -3.04
LINC00643Q86TS7 Y_RNA.781-201ENST00000620301 103 ntBASIC-3.91□□□□□ -3.04
LINC00643Q86TS7 Y_RNA.152-201ENST00000363578 100 ntBASIC-3.92□□□□□ -3.04
LINC00643Q86TS7 Y_RNA.400-201ENST00000383963 111 ntBASIC-3.92□□□□□ -3.04
LINC00643Q86TS7 AL132765.2-201ENST00000610812 351 ntBASIC-3.92□□□□□ -3.04
LINC00643Q86TS7 Y_RNA.222-201ENST00000364264 102 ntBASIC-3.93□□□□□ -3.04
LINC00643Q86TS7 RNU6-593P-201ENST00000364716 112 ntBASIC-3.93□□□□□ -3.04
LINC00643Q86TS7 SNORA24B-201ENST00000384176 131 ntBASIC-3.93□□□□□ -3.04
LINC00643Q86TS7 RNU6-630P-201ENST00000391258 106 ntBASIC-3.93□□□□□ -3.04
LINC00643Q86TS7 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-3.93□□□□□ -3.04
LINC00643Q86TS7 RNU6-65P-201ENST00000516332 98 ntBASIC-3.93□□□□□ -3.04
LINC00643Q86TS7 AC006254.2-201ENST00000603259 279 ntBASIC-3.93□□□□□ -3.04
LINC00643Q86TS7 PISRT1.1-201ENST00000616930 107 ntBASIC-3.93□□□□□ -3.04
LINC00643Q86TS7 Y_RNA.83-201ENST00000363005 113 ntBASIC-3.94□□□□□ -3.04
LINC00643Q86TS7 RNU6-478P-201ENST00000363904 110 ntBASIC-3.94□□□□□ -3.04
LINC00643Q86TS7 Y_RNA.296-201ENST00000364930 108 ntBASIC-3.94□□□□□ -3.04
LINC00643Q86TS7 Y_RNA.404-201ENST00000383978 102 ntBASIC-3.94□□□□□ -3.04
LINC00643Q86TS7 MIR521-2-201ENST00000384818 87 ntBASIC-3.94□□□□□ -3.04
LINC00643Q86TS7 MIR203A-201ENST00000384836 110 ntBASIC-3.94□□□□□ -3.04
LINC00643Q86TS7 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC-3.94□□□□□ -3.04
LINC00643Q86TS7 Y_RNA.409-201ENST00000383990 98 ntBASIC-3.95□□□□□ -3.04
LINC00643Q86TS7 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-3.95□□□□□ -3.04
LINC00643Q86TS7 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC-3.95□□□□□ -3.04
LINC00643Q86TS7 MIR548AG1-201ENST00000579932 66 ntBASIC-3.95□□□□□ -3.04
LINC00643Q86TS7 AC040904.1-201ENST00000590850 223 ntBASIC-3.95□□□□□ -3.04
LINC00643Q86TS7 RNU4-24P-201ENST00000364565 139 ntBASIC-3.96□□□□□ -3.04
LINC00643Q86TS7 Y_RNA.298-201ENST00000364960 107 ntBASIC-3.96□□□□□ -3.04
LINC00643Q86TS7 RNU6-1013P-201ENST00000384180 107 ntBASIC-3.96□□□□□ -3.04
LINC00643Q86TS7 MIR513B-201ENST00000385136 84 ntBASIC-3.96□□□□□ -3.04
LINC00643Q86TS7 SEPT14P3-201ENST00000439401 183 ntBASIC-3.96□□□□□ -3.04
Retrieved 100 of 98,524 protein–RNA pairs in 177.7 ms