Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 MIR6857-201ENST00000613267 93 ntBASIC1.12□□□□□ -2.23
UBE3BQ7Z3V4 RNU6-905P-201ENST00000384434 107 ntBASIC1.11□□□□□ -2.23
UBE3BQ7Z3V4 SPINT5P-201ENST00000448174 155 ntBASIC1.11□□□□□ -2.23
UBE3BQ7Z3V4 AC109327.2-201ENST00000448339 378 ntBASIC1.11□□□□□ -2.23
UBE3BQ7Z3V4 RNU7-102P-201ENST00000458948 62 ntBASIC1.11□□□□□ -2.23
UBE3BQ7Z3V4 RNU6-795P-201ENST00000516323 103 ntBASIC1.11□□□□□ -2.23
UBE3BQ7Z3V4 SNORA40.13-201ENST00000516379 120 ntBASIC1.11□□□□□ -2.23
UBE3BQ7Z3V4 AP003327.1-201ENST00000529684 127 ntBASIC1.11□□□□□ -2.23
UBE3BQ7Z3V4 MTND5P40-201ENST00000559945 246 ntBASIC1.11□□□□□ -2.23
UBE3BQ7Z3V4 MIR151B-201ENST00000584249 96 ntBASIC1.11□□□□□ -2.23
UBE3BQ7Z3V4 MIR2052-201ENST00000636055 55 ntBASIC1.11□□□□□ -2.23
UBE3BQ7Z3V4 RNU6-640P-201ENST00000363693 105 ntBASIC1.1□□□□□ -2.23
UBE3BQ7Z3V4 Y_RNA.567-201ENST00000384736 106 ntBASIC1.1□□□□□ -2.23
UBE3BQ7Z3V4 MIR520F-201ENST00000384824 87 ntBASIC1.1□□□□□ -2.23
UBE3BQ7Z3V4 MIR942-201ENST00000401111 86 ntBASIC1.1□□□□□ -2.23
UBE3BQ7Z3V4 MIR548Z-201ENST00000584743 97 ntBASIC1.1□□□□□ -2.23
UBE3BQ7Z3V4 AC013244.2-201ENST00000603396 103 ntBASIC1.1□□□□□ -2.23
UBE3BQ7Z3V4 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.1□□□□□ -2.23
UBE3BQ7Z3V4 Y_RNA.96-201ENST00000363092 109 ntBASIC1.09□□□□□ -2.23
UBE3BQ7Z3V4 RNU6-1244P-201ENST00000363614 108 ntBASIC1.09□□□□□ -2.23
UBE3BQ7Z3V4 RNU1-119P-201ENST00000391122 165 ntBASIC1.09□□□□□ -2.23
UBE3BQ7Z3V4 BX276092.1-201ENST00000427368 251 ntBASIC1.09□□□□□ -2.23
UBE3BQ7Z3V4 RNA5SP480-201ENST00000516840 109 ntBASIC1.09□□□□□ -2.23
UBE3BQ7Z3V4 RNU6-850P-201ENST00000516934 103 ntBASIC1.09□□□□□ -2.23
UBE3BQ7Z3V4 AC008608.1-201ENST00000603910 127 ntBASIC1.09□□□□□ -2.23
UBE3BQ7Z3V4 Y_RNA.56-201ENST00000362798 112 ntBASIC1.08□□□□□ -2.24
UBE3BQ7Z3V4 SNORD89-201ENST00000390981 114 ntBASIC1.08□□□□□ -2.24
UBE3BQ7Z3V4 RNA5SP255-201ENST00000516370 107 ntBASIC1.08□□□□□ -2.24
UBE3BQ7Z3V4 Y_RNA.467-201ENST00000384297 102 ntBASIC1.07□□□□□ -2.24
UBE3BQ7Z3V4 RNU6-813P-201ENST00000384691 107 ntBASIC1.07□□□□□ -2.24
UBE3BQ7Z3V4 SNORD105-201ENST00000386910 85 ntBASIC1.07□□□□□ -2.24
UBE3BQ7Z3V4 SNORD100-201ENST00000408573 76 ntBASIC1.07□□□□□ -2.24
UBE3BQ7Z3V4 Y_RNA.694-201ENST00000516677 117 ntBASIC1.06□□□□□ -2.24
UBE3BQ7Z3V4 Y_RNA.705-201ENST00000516862 110 ntBASIC1.06□□□□□ -2.24
UBE3BQ7Z3V4 RNU6-1223P-201ENST00000517124 104 ntBASIC1.06□□□□□ -2.24
UBE3BQ7Z3V4 MIR548H5-201ENST00000580314 60 ntBASIC1.06□□□□□ -2.24
UBE3BQ7Z3V4 AC025627.3-201ENST00000582078 182 ntBASIC1.06□□□□□ -2.24
UBE3BQ7Z3V4 RNU6-86P-201ENST00000606534 107 ntBASIC1.06□□□□□ -2.24
UBE3BQ7Z3V4 RNU7-10P-201ENST00000607194 63 ntBASIC1.06□□□□□ -2.24
UBE3BQ7Z3V4 AC022709.1-201ENST00000615967 87 ntBASIC1.06□□□□□ -2.24
UBE3BQ7Z3V4 MIR101-2-201ENST00000362195 79 ntBASIC1.05□□□□□ -2.24
UBE3BQ7Z3V4 Y_RNA.342-201ENST00000365352 113 ntBASIC1.05□□□□□ -2.24
UBE3BQ7Z3V4 Y_RNA.536-201ENST00000384621 113 ntBASIC1.05□□□□□ -2.24
UBE3BQ7Z3V4 MIR520H-201ENST00000385126 88 ntBASIC1.05□□□□□ -2.24
UBE3BQ7Z3V4 RNU6-644P-201ENST00000391155 98 ntBASIC1.05□□□□□ -2.24
UBE3BQ7Z3V4 RNU6-972P-201ENST00000391208 107 ntBASIC1.05□□□□□ -2.24
UBE3BQ7Z3V4 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.05□□□□□ -2.24
UBE3BQ7Z3V4 Y_RNA.697-201ENST00000516776 113 ntBASIC1.05□□□□□ -2.24
UBE3BQ7Z3V4 RNU6-448P-201ENST00000517052 107 ntBASIC1.05□□□□□ -2.24
UBE3BQ7Z3V4 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.05□□□□□ -2.24
UBE3BQ7Z3V4 CYP3A137P-201ENST00000562436 69 ntBASIC1.05□□□□□ -2.24
UBE3BQ7Z3V4 MIR6515-201ENST00000619843 57 ntBASIC1.05□□□□□ -2.24
UBE3BQ7Z3V4 RNU6-1125P-201ENST00000363601 107 ntBASIC1.04□□□□□ -2.24
UBE3BQ7Z3V4 RNU6-480P-201ENST00000384332 107 ntBASIC1.04□□□□□ -2.24
UBE3BQ7Z3V4 MIR519A1-201ENST00000385257 85 ntBASIC1.04□□□□□ -2.24
UBE3BQ7Z3V4 RNU6-887P-201ENST00000410660 100 ntBASIC1.04□□□□□ -2.24
UBE3BQ7Z3V4 RNU7-61P-201ENST00000515897 61 ntBASIC1.04□□□□□ -2.24
UBE3BQ7Z3V4 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.04□□□□□ -2.24
UBE3BQ7Z3V4 RNU6-1298P-201ENST00000362456 101 ntBASIC1.03□□□□□ -2.24
UBE3BQ7Z3V4 RNU6-1335P-201ENST00000365426 107 ntBASIC1.03□□□□□ -2.24
UBE3BQ7Z3V4 RNU6-291P-201ENST00000384720 107 ntBASIC1.03□□□□□ -2.24
UBE3BQ7Z3V4 RNU6ATAC27P-201ENST00000408289 119 ntBASIC1.03□□□□□ -2.24
UBE3BQ7Z3V4 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.03□□□□□ -2.24
UBE3BQ7Z3V4 MIR4661-201ENST00000582720 75 ntBASIC1.03□□□□□ -2.24
UBE3BQ7Z3V4 RNU6-535P-201ENST00000384722 107 ntBASIC1.02□□□□□ -2.25
UBE3BQ7Z3V4 MIR635-201ENST00000384830 98 ntBASIC1.02□□□□□ -2.25
UBE3BQ7Z3V4 TRAJ51-201ENST00000504127 63 ntBASIC1.02□□□□□ -2.25
UBE3BQ7Z3V4 AC103810.7-201ENST00000607821 91 ntBASIC1.02□□□□□ -2.25
UBE3BQ7Z3V4 Y_RNA.57-201ENST00000362806 113 ntBASIC1.01□□□□□ -2.25
UBE3BQ7Z3V4 MIR181B2-201ENST00000385004 89 ntBASIC1.01□□□□□ -2.25
UBE3BQ7Z3V4 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
UBE3BQ7Z3V4 SNORD63B-201ENST00000411005 70 ntBASIC1.01□□□□□ -2.25
UBE3BQ7Z3V4 AC092628.1-201ENST00000436250 252 ntBASIC1.01□□□□□ -2.25
UBE3BQ7Z3V4 AC002350.1-201ENST00000490759 375 ntBASIC1.01□□□□□ -2.25
UBE3BQ7Z3V4 uc_338.16-201ENST00000621804 95 ntBASIC1.01□□□□□ -2.25
UBE3BQ7Z3V4 Y_RNA.174-201ENST00000363781 105 ntBASIC1□□□□□ -2.25
UBE3BQ7Z3V4 MIR488-201ENST00000365739 83 ntBASIC1□□□□□ -2.25
UBE3BQ7Z3V4 SNORD58A-201ENST00000383875 65 ntBASIC1□□□□□ -2.25
UBE3BQ7Z3V4 MIR573-201ENST00000384964 99 ntBASIC1□□□□□ -2.25
UBE3BQ7Z3V4 MIR5000-201ENST00000577717 103 ntBASIC1□□□□□ -2.25
UBE3BQ7Z3V4 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1□□□□□ -2.25
UBE3BQ7Z3V4 U7.3-201ENST00000616123 62 ntBASIC1□□□□□ -2.25
UBE3BQ7Z3V4 MALAT1.1-201ENST00000618249 95 ntBASIC1□□□□□ -2.25
UBE3BQ7Z3V4 Y_RNA.36-201ENST00000362602 112 ntBASIC0.99□□□□□ -2.25
UBE3BQ7Z3V4 SNORD36A-201ENST00000362874 73 ntBASIC0.99□□□□□ -2.25
UBE3BQ7Z3V4 SNORD114-2-201ENST00000363953 78 ntBASIC0.99□□□□□ -2.25
UBE3BQ7Z3V4 Y_RNA.290-201ENST00000364879 114 ntBASIC0.99□□□□□ -2.25
UBE3BQ7Z3V4 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
UBE3BQ7Z3V4 RNU7-106P-201ENST00000459514 67 ntBASIC0.99□□□□□ -2.25
UBE3BQ7Z3V4 AC138907.6-201ENST00000568401 126 ntBASIC0.99□□□□□ -2.25
UBE3BQ7Z3V4 AC138869.1-201ENST00000568623 124 ntBASIC0.99□□□□□ -2.25
UBE3BQ7Z3V4 SNORD116-10-201ENST00000363791 102 ntBASIC0.98□□□□□ -2.25
UBE3BQ7Z3V4 RNU6-1187P-201ENST00000364771 110 ntBASIC0.98□□□□□ -2.25
UBE3BQ7Z3V4 MIR598-201ENST00000384868 97 ntBASIC0.98□□□□□ -2.25
UBE3BQ7Z3V4 MIR516A2-201ENST00000384888 90 ntBASIC0.98□□□□□ -2.25
UBE3BQ7Z3V4 MIR516A1-201ENST00000385033 90 ntBASIC0.98□□□□□ -2.25
UBE3BQ7Z3V4 RNU6-1254P-201ENST00000391266 104 ntBASIC0.98□□□□□ -2.25
UBE3BQ7Z3V4 AC097635.1-201ENST00000450678 155 ntBASIC0.98□□□□□ -2.25
UBE3BQ7Z3V4 AC244505.6-201ENST00000452829 130 ntBASIC0.98□□□□□ -2.25
UBE3BQ7Z3V4 RNA5SP436-201ENST00000516020 115 ntBASIC0.98□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 181.4 ms