Protein–RNA interactions for Protein: Q6ZTQ4

CDHR3, Cadherin-related family member 3, humanhuman

Predictions only

Length 885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3Q6ZTQ4 TMSB4XP3-201ENST00000445144 114 ntBASIC0.38□□□□□ -2.35
CDHR3Q6ZTQ4 SNRPGP12-201ENST00000449481 213 ntBASIC0.38□□□□□ -2.35
CDHR3Q6ZTQ4 RNU7-106P-201ENST00000459514 67 ntBASIC0.38□□□□□ -2.35
CDHR3Q6ZTQ4 RNA5SP268-201ENST00000516828 124 ntBASIC0.38□□□□□ -2.35
CDHR3Q6ZTQ4 RNU7-161P-201ENST00000517289 62 ntBASIC0.38□□□□□ -2.35
CDHR3Q6ZTQ4 MIR3910-1-201ENST00000580936 111 ntBASIC0.38□□□□□ -2.35
CDHR3Q6ZTQ4 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.38□□□□□ -2.35
CDHR3Q6ZTQ4 AL162726.3-218ENST00000636401 95 ntBASIC0.38□□□□□ -2.35
CDHR3Q6ZTQ4 RNU6-1313P-201ENST00000362622 102 ntBASIC0.37□□□□□ -2.35
CDHR3Q6ZTQ4 Y_RNA.155-201ENST00000363632 101 ntBASIC0.37□□□□□ -2.35
CDHR3Q6ZTQ4 MIR518A1-201ENST00000385068 85 ntBASIC0.37□□□□□ -2.35
CDHR3Q6ZTQ4 SNORA40.8-201ENST00000411034 126 ntBASIC0.37□□□□□ -2.35
CDHR3Q6ZTQ4 AC244505.6-201ENST00000452829 130 ntBASIC0.37□□□□□ -2.35
CDHR3Q6ZTQ4 RNU7-195P-201ENST00000458793 62 ntBASIC0.37□□□□□ -2.35
CDHR3Q6ZTQ4 RNU6-850P-201ENST00000516934 103 ntBASIC0.37□□□□□ -2.35
CDHR3Q6ZTQ4 MIR1273G-201ENST00000577677 100 ntBASIC0.37□□□□□ -2.35
CDHR3Q6ZTQ4 MIR548H5-201ENST00000580314 60 ntBASIC0.37□□□□□ -2.35
CDHR3Q6ZTQ4 MIR6828-201ENST00000636181 60 ntBASIC0.37□□□□□ -2.35
CDHR3Q6ZTQ4 AC010487.4-201ENST00000637027 61 ntBASIC0.37□□□□□ -2.35
CDHR3Q6ZTQ4 AL512310.12-203ENST00000640543 90 ntBASIC0.37□□□□□ -2.35
CDHR3Q6ZTQ4 MIRLET7D-201ENST00000362263 87 ntBASIC0.36□□□□□ -2.35
CDHR3Q6ZTQ4 Y_RNA.85-201ENST00000363014 111 ntBASIC0.36□□□□□ -2.35
CDHR3Q6ZTQ4 Y_RNA.221-201ENST00000364248 96 ntBASIC0.36□□□□□ -2.35
CDHR3Q6ZTQ4 RNU6-409P-201ENST00000384114 104 ntBASIC0.36□□□□□ -2.35
CDHR3Q6ZTQ4 RNU6-1201P-201ENST00000384227 107 ntBASIC0.36□□□□□ -2.35
CDHR3Q6ZTQ4 MIR635-201ENST00000384830 98 ntBASIC0.36□□□□□ -2.35
CDHR3Q6ZTQ4 SNORD63B-201ENST00000411005 70 ntBASIC0.36□□□□□ -2.35
CDHR3Q6ZTQ4 AC069271.1-201ENST00000445577 156 ntBASIC0.36□□□□□ -2.35
CDHR3Q6ZTQ4 SCARNA16.5-201ENST00000517114 183 ntBASIC0.36□□□□□ -2.35
CDHR3Q6ZTQ4 MIR3613-201ENST00000579844 87 ntBASIC0.36□□□□□ -2.35
CDHR3Q6ZTQ4 MIR4639-201ENST00000584938 69 ntBASIC0.36□□□□□ -2.35
CDHR3Q6ZTQ4 SNORD44.1-201ENST00000363202 61 ntBASIC0.35□□□□□ -2.35
CDHR3Q6ZTQ4 RNA5SP325-201ENST00000363756 130 ntBASIC0.35□□□□□ -2.35
CDHR3Q6ZTQ4 RNU6-716P-201ENST00000365621 103 ntBASIC0.35□□□□□ -2.35
CDHR3Q6ZTQ4 VTRNA1-3-201ENST00000365645 89 ntBASIC0.35□□□□□ -2.35
CDHR3Q6ZTQ4 MIR516A2-201ENST00000384888 90 ntBASIC0.35□□□□□ -2.35
CDHR3Q6ZTQ4 MIR516A1-201ENST00000385033 90 ntBASIC0.35□□□□□ -2.35
CDHR3Q6ZTQ4 MIR577-201ENST00000385196 96 ntBASIC0.35□□□□□ -2.35
CDHR3Q6ZTQ4 MIR548A3-201ENST00000385297 97 ntBASIC0.35□□□□□ -2.35
CDHR3Q6ZTQ4 AL603908.1-201ENST00000406098 201 ntBASIC0.35□□□□□ -2.35
CDHR3Q6ZTQ4 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.35□□□□□ -2.35
CDHR3Q6ZTQ4 AC138869.1-201ENST00000568623 124 ntBASIC0.35□□□□□ -2.35
CDHR3Q6ZTQ4 U6.95-201ENST00000636931 70 ntBASIC0.35□□□□□ -2.35
CDHR3Q6ZTQ4 Y_RNA.35-201ENST00000362601 101 ntBASIC0.34□□□□□ -2.36
CDHR3Q6ZTQ4 RNU6-170P-201ENST00000362832 104 ntBASIC0.34□□□□□ -2.36
CDHR3Q6ZTQ4 RNU6-1229P-201ENST00000364295 107 ntBASIC0.34□□□□□ -2.36
CDHR3Q6ZTQ4 Y_RNA.507-201ENST00000384500 99 ntBASIC0.34□□□□□ -2.36
CDHR3Q6ZTQ4 MIR599-201ENST00000385069 95 ntBASIC0.34□□□□□ -2.36
CDHR3Q6ZTQ4 MIR548I2-201ENST00000408348 149 ntBASIC0.34□□□□□ -2.36
CDHR3Q6ZTQ4 RPL39P34-201ENST00000477141 156 ntBASIC0.34□□□□□ -2.36
CDHR3Q6ZTQ4 MIR4679-2-201ENST00000578358 77 ntBASIC0.34□□□□□ -2.36
CDHR3Q6ZTQ4 MIR4752-201ENST00000579672 72 ntBASIC0.34□□□□□ -2.36
CDHR3Q6ZTQ4 AC090625.1-201ENST00000357130 210 ntBASIC0.33□□□□□ -2.36
CDHR3Q6ZTQ4 RNA5SP403-201ENST00000363598 108 ntBASIC0.33□□□□□ -2.36
CDHR3Q6ZTQ4 RNU6-571P-201ENST00000384128 107 ntBASIC0.33□□□□□ -2.36
CDHR3Q6ZTQ4 Y_RNA.563-201ENST00000384707 108 ntBASIC0.33□□□□□ -2.36
CDHR3Q6ZTQ4 SPINT5P-201ENST00000448174 155 ntBASIC0.33□□□□□ -2.36
CDHR3Q6ZTQ4 RNU7-104P-201ENST00000459398 79 ntBASIC0.33□□□□□ -2.36
CDHR3Q6ZTQ4 RNA5SP227-201ENST00000516184 113 ntBASIC0.33□□□□□ -2.36
CDHR3Q6ZTQ4 AC068339.1-201ENST00000526965 141 ntBASIC0.33□□□□□ -2.36
CDHR3Q6ZTQ4 MTND5P40-201ENST00000559945 246 ntBASIC0.33□□□□□ -2.36
CDHR3Q6ZTQ4 MIR6755-201ENST00000619993 66 ntBASIC0.33□□□□□ -2.36
CDHR3Q6ZTQ4 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.33□□□□□ -2.36
CDHR3Q6ZTQ4 RNU6-726P-201ENST00000364680 107 ntBASIC0.32□□□□□ -2.36
CDHR3Q6ZTQ4 U8.6-201ENST00000364939 135 ntBASIC0.32□□□□□ -2.36
CDHR3Q6ZTQ4 RNU6-22P-201ENST00000384355 107 ntBASIC0.32□□□□□ -2.36
CDHR3Q6ZTQ4 MIR548G-201ENST00000408442 89 ntBASIC0.32□□□□□ -2.36
CDHR3Q6ZTQ4 RNU6-1018P-201ENST00000516577 106 ntBASIC0.32□□□□□ -2.36
CDHR3Q6ZTQ4 RNU6-135P-201ENST00000516769 101 ntBASIC0.32□□□□□ -2.36
CDHR3Q6ZTQ4 AL670379.3-201ENST00000605040 251 ntBASIC0.32□□□□□ -2.36
CDHR3Q6ZTQ4 AL442128.1-201ENST00000615151 90 ntBASIC0.32□□□□□ -2.36
CDHR3Q6ZTQ4 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
CDHR3Q6ZTQ4 SNORD38.1-201ENST00000363863 68 ntBASIC0.31□□□□□ -2.36
CDHR3Q6ZTQ4 Y_RNA.342-201ENST00000365352 113 ntBASIC0.31□□□□□ -2.36
CDHR3Q6ZTQ4 MIR1912-201ENST00000410389 80 ntBASIC0.31□□□□□ -2.36
CDHR3Q6ZTQ4 SNORD71-201ENST00000411292 86 ntBASIC0.31□□□□□ -2.36
CDHR3Q6ZTQ4 AL161932.1-201ENST00000437408 146 ntBASIC0.31□□□□□ -2.36
CDHR3Q6ZTQ4 AC097635.1-201ENST00000450678 155 ntBASIC0.31□□□□□ -2.36
CDHR3Q6ZTQ4 Y_RNA.809-201ENST00000516058 95 ntBASIC0.31□□□□□ -2.36
CDHR3Q6ZTQ4 RNU1-29P-201ENST00000606574 126 ntBASIC0.31□□□□□ -2.36
CDHR3Q6ZTQ4 AC132825.6-201ENST00000638861 357 ntBASIC0.31□□□□□ -2.36
CDHR3Q6ZTQ4 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC0.31□□□□□ -2.36
CDHR3Q6ZTQ4 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.31□□□□□ -2.36
CDHR3Q6ZTQ4 AC091304.10-201ENST00000641554 121 ntBASIC0.31□□□□□ -2.36
CDHR3Q6ZTQ4 Y_RNA.173-201ENST00000363776 113 ntBASIC0.3□□□□□ -2.36
CDHR3Q6ZTQ4 RNU6-524P-201ENST00000384270 107 ntBASIC0.3□□□□□ -2.36
CDHR3Q6ZTQ4 MIR519A1-201ENST00000385257 85 ntBASIC0.3□□□□□ -2.36
CDHR3Q6ZTQ4 RNU6-1168P-201ENST00000390831 104 ntBASIC0.3□□□□□ -2.36
CDHR3Q6ZTQ4 AC008267.6-201ENST00000441664 139 ntBASIC0.3□□□□□ -2.36
CDHR3Q6ZTQ4 RNU6-863P-201ENST00000515989 104 ntBASIC0.3□□□□□ -2.36
CDHR3Q6ZTQ4 RNA5SP134-201ENST00000516492 96 ntBASIC0.3□□□□□ -2.36
CDHR3Q6ZTQ4 MIR5009-201ENST00000578736 100 ntBASIC0.3□□□□□ -2.36
CDHR3Q6ZTQ4 RNU7-10P-201ENST00000607194 63 ntBASIC0.3□□□□□ -2.36
CDHR3Q6ZTQ4 RNU6-832P-201ENST00000363319 107 ntBASIC0.29□□□□□ -2.36
CDHR3Q6ZTQ4 RNU6-1099P-201ENST00000363533 107 ntBASIC0.29□□□□□ -2.36
CDHR3Q6ZTQ4 RNU6-1163P-201ENST00000364516 107 ntBASIC0.29□□□□□ -2.36
CDHR3Q6ZTQ4 Y_RNA.309-201ENST00000365046 111 ntBASIC0.29□□□□□ -2.36
CDHR3Q6ZTQ4 SNORD116-21-201ENST00000384507 92 ntBASIC0.29□□□□□ -2.36
CDHR3Q6ZTQ4 RNU6-1232P-201ENST00000516299 86 ntBASIC0.29□□□□□ -2.36
CDHR3Q6ZTQ4 RNU6-90P-201ENST00000606352 106 ntBASIC0.29□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 180.5 ms