Protein–RNA interactions for Protein: Q5W0Q7

USPL1, SUMO-specific isopeptidase USPL1, humanhuman

Predictions only

Length 1,092 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1Q5W0Q7 snoU13.21-201ENST00000459368 105 ntBASIC1.75□□□□□ -2.13
USPL1Q5W0Q7 MIR4771-2-201ENST00000577758 74 ntBASIC1.75□□□□□ -2.13
USPL1Q5W0Q7 MIR4771-1-201ENST00000582617 74 ntBASIC1.75□□□□□ -2.13
USPL1Q5W0Q7 MIR3202-2-201ENST00000635980 79 ntBASIC1.75□□□□□ -2.13
USPL1Q5W0Q7 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
USPL1Q5W0Q7 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
USPL1Q5W0Q7 Y_RNA.56-201ENST00000362798 112 ntBASIC1.74□□□□□ -2.13
USPL1Q5W0Q7 RNU6-1276P-201ENST00000365372 104 ntBASIC1.74□□□□□ -2.13
USPL1Q5W0Q7 RNU6-42P-201ENST00000384165 107 ntBASIC1.74□□□□□ -2.13
USPL1Q5W0Q7 MIR635-201ENST00000384830 98 ntBASIC1.74□□□□□ -2.13
USPL1Q5W0Q7 MIR519A1-201ENST00000385257 85 ntBASIC1.74□□□□□ -2.13
USPL1Q5W0Q7 RNU6-592P-201ENST00000411333 103 ntBASIC1.74□□□□□ -2.13
USPL1Q5W0Q7 AC023790.1-201ENST00000482174 347 ntBASIC1.74□□□□□ -2.13
USPL1Q5W0Q7 RNU6-267P-201ENST00000516714 103 ntBASIC1.74□□□□□ -2.13
USPL1Q5W0Q7 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.74□□□□□ -2.13
USPL1Q5W0Q7 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.73□□□□□ -2.13
USPL1Q5W0Q7 RNU6-243P-201ENST00000391140 107 ntBASIC1.73□□□□□ -2.13
USPL1Q5W0Q7 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.73□□□□□ -2.13
USPL1Q5W0Q7 RNU7-171P-201ENST00000459581 62 ntBASIC1.73□□□□□ -2.13
USPL1Q5W0Q7 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.73□□□□□ -2.13
USPL1Q5W0Q7 Y_RNA.685-201ENST00000516532 108 ntBASIC1.73□□□□□ -2.13
USPL1Q5W0Q7 AC023827.1-201ENST00000569247 97 ntBASIC1.73□□□□□ -2.13
USPL1Q5W0Q7 AL078603.1-201ENST00000603824 313 ntBASIC1.73□□□□□ -2.13
USPL1Q5W0Q7 Y_RNA.13-201ENST00000362403 112 ntBASIC1.72□□□□□ -2.13
USPL1Q5W0Q7 Y_RNA.42-201ENST00000362660 108 ntBASIC1.72□□□□□ -2.13
USPL1Q5W0Q7 SNORD36A-201ENST00000362874 73 ntBASIC1.72□□□□□ -2.13
USPL1Q5W0Q7 Y_RNA.540-201ENST00000384638 111 ntBASIC1.72□□□□□ -2.13
USPL1Q5W0Q7 SNORD100-201ENST00000408573 76 ntBASIC1.72□□□□□ -2.13
USPL1Q5W0Q7 RNU6-994P-201ENST00000410507 111 ntBASIC1.72□□□□□ -2.13
USPL1Q5W0Q7 AC004223.1-201ENST00000479840 271 ntBASIC1.72□□□□□ -2.13
USPL1Q5W0Q7 RNA5SP220-201ENST00000516298 104 ntBASIC1.72□□□□□ -2.13
USPL1Q5W0Q7 SNORD92-201ENST00000585078 85 ntBASIC1.72□□□□□ -2.13
USPL1Q5W0Q7 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
USPL1Q5W0Q7 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
USPL1Q5W0Q7 Y_RNA.73-201ENST00000362910 113 ntBASIC1.71□□□□□ -2.14
USPL1Q5W0Q7 MIR519C-201ENST00000385053 87 ntBASIC1.71□□□□□ -2.14
USPL1Q5W0Q7 MIR938-201ENST00000401216 83 ntBASIC1.71□□□□□ -2.14
USPL1Q5W0Q7 SNORD4B-201ENST00000459083 72 ntBASIC1.71□□□□□ -2.14
USPL1Q5W0Q7 RNU7-40P-201ENST00000516397 64 ntBASIC1.71□□□□□ -2.14
USPL1Q5W0Q7 RNU7-156P-201ENST00000517214 74 ntBASIC1.71□□□□□ -2.14
USPL1Q5W0Q7 MIR4676-201ENST00000583078 72 ntBASIC1.71□□□□□ -2.14
USPL1Q5W0Q7 AC013244.2-201ENST00000603396 103 ntBASIC1.71□□□□□ -2.14
USPL1Q5W0Q7 MIR6734-201ENST00000621166 68 ntBASIC1.71□□□□□ -2.14
USPL1Q5W0Q7 MIR1245B-201ENST00000636115 69 ntBASIC1.71□□□□□ -2.14
USPL1Q5W0Q7 MIR516A2-201ENST00000384888 90 ntBASIC1.7□□□□□ -2.14
USPL1Q5W0Q7 MIR516A1-201ENST00000385033 90 ntBASIC1.7□□□□□ -2.14
USPL1Q5W0Q7 SNORD63B-201ENST00000411005 70 ntBASIC1.7□□□□□ -2.14
USPL1Q5W0Q7 AC087499.7-201ENST00000441958 109 ntBASIC1.7□□□□□ -2.14
USPL1Q5W0Q7 RNA5SP61-201ENST00000516453 100 ntBASIC1.7□□□□□ -2.14
USPL1Q5W0Q7 MIR3660-201ENST00000584845 100 ntBASIC1.7□□□□□ -2.14
USPL1Q5W0Q7 MIR548BB-201ENST00000626714 66 ntBASIC1.7□□□□□ -2.14
USPL1Q5W0Q7 RNU6-364P-201ENST00000384387 107 ntBASIC1.69□□□□□ -2.14
USPL1Q5W0Q7 Y_RNA.536-201ENST00000384621 113 ntBASIC1.69□□□□□ -2.14
USPL1Q5W0Q7 SNORD78.1-201ENST00000390866 65 ntBASIC1.69□□□□□ -2.14
USPL1Q5W0Q7 Y_RNA.611-201ENST00000410682 108 ntBASIC1.69□□□□□ -2.14
USPL1Q5W0Q7 AC067940.1-201ENST00000458411 300 ntBASIC1.69□□□□□ -2.14
USPL1Q5W0Q7 RNU1-93P-201ENST00000364704 169 ntBASIC1.68□□□□□ -2.14
USPL1Q5W0Q7 RNU6-1275P-201ENST00000391087 107 ntBASIC1.68□□□□□ -2.14
USPL1Q5W0Q7 SNORA40.6-201ENST00000391153 128 ntBASIC1.68□□□□□ -2.14
USPL1Q5W0Q7 MIR1236-201ENST00000408340 102 ntBASIC1.68□□□□□ -2.14
USPL1Q5W0Q7 AC027335.2-201ENST00000624030 375 ntBASIC1.68□□□□□ -2.14
USPL1Q5W0Q7 AC006160.2-201ENST00000637708 154 ntBASIC1.68□□□□□ -2.14
USPL1Q5W0Q7 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.68□□□□□ -2.14
USPL1Q5W0Q7 MIR1-1-201ENST00000362147 71 ntBASIC1.67□□□□□ -2.14
USPL1Q5W0Q7 SNORD114-27-201ENST00000363766 70 ntBASIC1.67□□□□□ -2.14
USPL1Q5W0Q7 SNORD115-37-201ENST00000363768 82 ntBASIC1.67□□□□□ -2.14
USPL1Q5W0Q7 MIR7-2-201ENST00000384970 110 ntBASIC1.67□□□□□ -2.14
USPL1Q5W0Q7 RNU6-466P-201ENST00000391224 103 ntBASIC1.67□□□□□ -2.14
USPL1Q5W0Q7 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.67□□□□□ -2.14
USPL1Q5W0Q7 Y_RNA.607-201ENST00000410597 98 ntBASIC1.67□□□□□ -2.14
USPL1Q5W0Q7 Y_RNA.697-201ENST00000516776 113 ntBASIC1.67□□□□□ -2.14
USPL1Q5W0Q7 MIR4666B-201ENST00000578142 81 ntBASIC1.67□□□□□ -2.14
USPL1Q5W0Q7 MIR520E-201ENST00000384867 87 ntBASIC1.66□□□□□ -2.14
USPL1Q5W0Q7 RNU6-977P-201ENST00000516411 103 ntBASIC1.66□□□□□ -2.14
USPL1Q5W0Q7 AC138907.6-201ENST00000568401 126 ntBASIC1.66□□□□□ -2.14
USPL1Q5W0Q7 AC138869.1-201ENST00000568623 124 ntBASIC1.66□□□□□ -2.14
USPL1Q5W0Q7 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.66□□□□□ -2.14
USPL1Q5W0Q7 RNU6-1260P-201ENST00000362944 107 ntBASIC1.65□□□□□ -2.15
USPL1Q5W0Q7 SNORA25-201ENST00000384384 134 ntBASIC1.65□□□□□ -2.15
USPL1Q5W0Q7 MIR222-201ENST00000384992 110 ntBASIC1.65□□□□□ -2.15
USPL1Q5W0Q7 AC092628.1-201ENST00000436250 252 ntBASIC1.65□□□□□ -2.15
USPL1Q5W0Q7 RNU7-106P-201ENST00000459514 67 ntBASIC1.65□□□□□ -2.15
USPL1Q5W0Q7 AC093729.1-201ENST00000513074 128 ntBASIC1.65□□□□□ -2.15
USPL1Q5W0Q7 RNU6-65P-201ENST00000516332 98 ntBASIC1.65□□□□□ -2.15
USPL1Q5W0Q7 MIR4804-201ENST00000581683 73 ntBASIC1.65□□□□□ -2.15
USPL1Q5W0Q7 RNU6-369P-201ENST00000362515 102 ntBASIC1.64□□□□□ -2.15
USPL1Q5W0Q7 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
USPL1Q5W0Q7 MIR100-201ENST00000385259 80 ntBASIC1.64□□□□□ -2.15
USPL1Q5W0Q7 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
USPL1Q5W0Q7 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
USPL1Q5W0Q7 MIR1827-201ENST00000408549 66 ntBASIC1.64□□□□□ -2.15
USPL1Q5W0Q7 AC097635.1-201ENST00000450678 155 ntBASIC1.64□□□□□ -2.15
USPL1Q5W0Q7 RNU7-85P-201ENST00000458851 63 ntBASIC1.64□□□□□ -2.15
USPL1Q5W0Q7 TRAJ51-201ENST00000504127 63 ntBASIC1.64□□□□□ -2.15
USPL1Q5W0Q7 MIR4536-1-201ENST00000583537 88 ntBASIC1.64□□□□□ -2.15
USPL1Q5W0Q7 AC022709.1-201ENST00000615967 87 ntBASIC1.64□□□□□ -2.15
USPL1Q5W0Q7 Y_RNA.283-201ENST00000364798 112 ntBASIC1.63□□□□□ -2.15
USPL1Q5W0Q7 RNU6-997P-201ENST00000384725 107 ntBASIC1.63□□□□□ -2.15
USPL1Q5W0Q7 AC002429.1-201ENST00000437672 148 ntBASIC1.63□□□□□ -2.15
USPL1Q5W0Q7 Y_RNA.809-201ENST00000516058 95 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms