Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC-1.75□□□□□ -2.69
VPS13DQ5THJ4 AC021443.1-201ENST00000604478 211 ntBASIC-1.75□□□□□ -2.69
VPS13DQ5THJ4 RNU6-108P-201ENST00000365558 107 ntBASIC-1.75□□□□□ -2.69
VPS13DQ5THJ4 Y_RNA.629-201ENST00000411368 105 ntBASIC-1.75□□□□□ -2.69
VPS13DQ5THJ4 AL590623.1-201ENST00000427864 105 ntBASIC-1.75□□□□□ -2.69
VPS13DQ5THJ4 AC013734.1-201ENST00000619329 111 ntBASIC-1.75□□□□□ -2.69
VPS13DQ5THJ4 Y_RNA.672-201ENST00000516289 104 ntBASIC-1.76□□□□□ -2.69
VPS13DQ5THJ4 RNA5SP153-201ENST00000516498 76 ntBASIC-1.76□□□□□ -2.69
VPS13DQ5THJ4 Y_RNA.101-201ENST00000363154 102 ntBASIC-1.76□□□□□ -2.69
VPS13DQ5THJ4 AL133173.2-201ENST00000614270 90 ntBASIC-1.76□□□□□ -2.69
VPS13DQ5THJ4 SNORD116-11-201ENST00000383882 92 ntBASIC-1.76□□□□□ -2.69
VPS13DQ5THJ4 Y_RNA.618-201ENST00000410949 107 ntBASIC-1.76□□□□□ -2.69
VPS13DQ5THJ4 RPS29P25-201ENST00000481709 171 ntBASIC-1.76□□□□□ -2.69
VPS13DQ5THJ4 RNU7-2P-201ENST00000516096 62 ntBASIC-1.76□□□□□ -2.69
VPS13DQ5THJ4 Y_RNA.668-201ENST00000516233 93 ntBASIC-1.76□□□□□ -2.69
VPS13DQ5THJ4 RNU6-1213P-201ENST00000517075 94 ntBASIC-1.76□□□□□ -2.69
VPS13DQ5THJ4 RNU6-595P-201ENST00000363944 107 ntBASIC-1.77□□□□□ -2.69
VPS13DQ5THJ4 SNORD113-3-201ENST00000364830 72 ntBASIC-1.77□□□□□ -2.69
VPS13DQ5THJ4 SNORD63-201ENST00000384262 68 ntBASIC-1.77□□□□□ -2.69
VPS13DQ5THJ4 MIR517A-201ENST00000385001 87 ntBASIC-1.77□□□□□ -2.69
VPS13DQ5THJ4 RNU2-4P-201ENST00000606190 192 ntBASIC-1.77□□□□□ -2.69
VPS13DQ5THJ4 AC007485.1-201ENST00000616755 206 ntBASIC-1.77□□□□□ -2.69
VPS13DQ5THJ4 SNORD115-31-201ENST00000365318 82 ntBASIC-1.77□□□□□ -2.69
VPS13DQ5THJ4 MIR548AJ2-201ENST00000408539 92 ntBASIC-1.77□□□□□ -2.69
VPS13DQ5THJ4 Y_RNA.652-201ENST00000458902 102 ntBASIC-1.77□□□□□ -2.69
VPS13DQ5THJ4 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-1.77□□□□□ -2.69
VPS13DQ5THJ4 MIR429-201ENST00000362106 83 ntBASIC-1.77□□□□□ -2.69
VPS13DQ5THJ4 RNU6-82P-201ENST00000363970 107 ntBASIC-1.77□□□□□ -2.69
VPS13DQ5THJ4 RNU6-828P-201ENST00000364876 107 ntBASIC-1.77□□□□□ -2.69
VPS13DQ5THJ4 MIR624-201ENST00000385217 97 ntBASIC-1.77□□□□□ -2.69
VPS13DQ5THJ4 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC-1.77□□□□□ -2.69
VPS13DQ5THJ4 AC009779.6-201ENST00000603972 165 ntBASIC-1.77□□□□□ -2.69
VPS13DQ5THJ4 Y_RNA.83-201ENST00000363005 113 ntBASIC-1.77□□□□□ -2.69
VPS13DQ5THJ4 RNU6-673P-201ENST00000365084 104 ntBASIC-1.77□□□□□ -2.69
VPS13DQ5THJ4 MIR548U-201ENST00000390728 81 ntBASIC-1.77□□□□□ -2.69
VPS13DQ5THJ4 AL691482.2-201ENST00000457453 84 ntBASIC-1.77□□□□□ -2.69
VPS13DQ5THJ4 RNU6-75P-201ENST00000515944 104 ntBASIC-1.77□□□□□ -2.69
VPS13DQ5THJ4 RNU6-345P-201ENST00000517001 107 ntBASIC-1.77□□□□□ -2.69
VPS13DQ5THJ4 RNU6-570P-201ENST00000517051 105 ntBASIC-1.77□□□□□ -2.69
VPS13DQ5THJ4 MIR1-2-201ENST00000384961 85 ntBASIC-1.78□□□□□ -2.69
VPS13DQ5THJ4 MTND2P22-201ENST00000444325 1033 ntBASIC-1.78□□□□□ -2.69
VPS13DQ5THJ4 U2.7-201ENST00000619197 100 ntBASIC-1.78□□□□□ -2.69
VPS13DQ5THJ4 RNU6-957P-201ENST00000363652 99 ntBASIC-1.78□□□□□ -2.69
VPS13DQ5THJ4 Y_RNA.541-201ENST00000384640 113 ntBASIC-1.78□□□□□ -2.69
VPS13DQ5THJ4 RNU6-1248P-201ENST00000391096 64 ntBASIC-1.78□□□□□ -2.69
VPS13DQ5THJ4 MIR548I1-201ENST00000408810 149 ntBASIC-1.78□□□□□ -2.69
VPS13DQ5THJ4 MTND4LP1-201ENST00000446263 157 ntBASIC-1.78□□□□□ -2.69
VPS13DQ5THJ4 Y_RNA.144-201ENST00000363521 113 ntBASIC-1.78□□□□□ -2.69
VPS13DQ5THJ4 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.78□□□□□ -2.69
VPS13DQ5THJ4 AC024067.1-201ENST00000426199 223 ntBASIC-1.78□□□□□ -2.69
VPS13DQ5THJ4 MIR3145-201ENST00000580727 82 ntBASIC-1.78□□□□□ -2.69
VPS13DQ5THJ4 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC-1.78□□□□□ -2.69
VPS13DQ5THJ4 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC-1.78□□□□□ -2.69
VPS13DQ5THJ4 RNU6-382P-201ENST00000365181 106 ntBASIC-1.79□□□□□ -2.7
VPS13DQ5THJ4 RNU6-533P-201ENST00000384144 107 ntBASIC-1.79□□□□□ -2.7
VPS13DQ5THJ4 MIR4273-201ENST00000582824 84 ntBASIC-1.79□□□□□ -2.7
VPS13DQ5THJ4 MIR3657-201ENST00000584818 117 ntBASIC-1.79□□□□□ -2.7
VPS13DQ5THJ4 AC048344.4-201ENST00000619744 527 ntBASIC-1.79□□□□□ -2.7
VPS13DQ5THJ4 Y_RNA.434-201ENST00000384090 100 ntBASIC-1.79□□□□□ -2.7
VPS13DQ5THJ4 Y_RNA.556-201ENST00000384677 113 ntBASIC-1.79□□□□□ -2.7
VPS13DQ5THJ4 Y_RNA.608-201ENST00000410647 95 ntBASIC-1.79□□□□□ -2.7
VPS13DQ5THJ4 AC138393.2-201ENST00000414742 246 ntBASIC-1.79□□□□□ -2.7
VPS13DQ5THJ4 RNU6-189P-201ENST00000516120 101 ntBASIC-1.79□□□□□ -2.7
VPS13DQ5THJ4 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.79□□□□□ -2.7
VPS13DQ5THJ4 MIR3942-201ENST00000585264 109 ntBASIC-1.79□□□□□ -2.7
VPS13DQ5THJ4 RNU6-1205P-201ENST00000363625 106 ntBASIC-1.79□□□□□ -2.7
VPS13DQ5THJ4 RNU6-681P-201ENST00000364012 104 ntBASIC-1.79□□□□□ -2.7
VPS13DQ5THJ4 SNORD78.2-201ENST00000391076 69 ntBASIC-1.79□□□□□ -2.7
VPS13DQ5THJ4 U2.18-201ENST00000622185 84 ntBASIC-1.79□□□□□ -2.7
VPS13DQ5THJ4 Y_RNA.405-201ENST00000383979 100 ntBASIC-1.8□□□□□ -2.7
VPS13DQ5THJ4 Y_RNA.451-201ENST00000384200 100 ntBASIC-1.8□□□□□ -2.7
VPS13DQ5THJ4 Y_RNA.524-201ENST00000384564 100 ntBASIC-1.8□□□□□ -2.7
VPS13DQ5THJ4 Y_RNA.561-201ENST00000384694 100 ntBASIC-1.8□□□□□ -2.7
VPS13DQ5THJ4 RNU4-69P-201ENST00000410677 143 ntBASIC-1.8□□□□□ -2.7
VPS13DQ5THJ4 AC024933.1-201ENST00000608472 348 ntBASIC-1.8□□□□□ -2.7
VPS13DQ5THJ4 MIR548C-201ENST00000384815 97 ntBASIC-1.8□□□□□ -2.7
VPS13DQ5THJ4 AC060780.3-201ENST00000589464 80 ntBASIC-1.8□□□□□ -2.7
VPS13DQ5THJ4 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.8□□□□□ -2.7
VPS13DQ5THJ4 SNORD60-201ENST00000383903 83 ntBASIC-1.8□□□□□ -2.7
VPS13DQ5THJ4 Y_RNA.557-201ENST00000384680 107 ntBASIC-1.8□□□□□ -2.7
VPS13DQ5THJ4 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-1.8□□□□□ -2.7
VPS13DQ5THJ4 MIR8084-201ENST00000614105 89 ntBASIC-1.8□□□□□ -2.7
VPS13DQ5THJ4 RNU6-845P-201ENST00000362578 103 ntBASIC-1.81□□□□□ -2.7
VPS13DQ5THJ4 RNU6-626P-201ENST00000363354 107 ntBASIC-1.81□□□□□ -2.7
VPS13DQ5THJ4 Y_RNA.281-201ENST00000364774 94 ntBASIC-1.81□□□□□ -2.7
VPS13DQ5THJ4 MTND4LP7-201ENST00000431728 294 ntBASIC-1.81□□□□□ -2.7
VPS13DQ5THJ4 SCARNA15-202ENST00000516881 127 ntBASIC-1.81□□□□□ -2.7
VPS13DQ5THJ4 MIR4703-201ENST00000577728 79 ntBASIC-1.81□□□□□ -2.7
VPS13DQ5THJ4 Z84480.1-201ENST00000605131 311 ntBASIC-1.81□□□□□ -2.7
VPS13DQ5THJ4 AC006927.2-201ENST00000639256 389 ntBASIC-1.81□□□□□ -2.7
VPS13DQ5THJ4 RNU6-801P-201ENST00000364087 105 ntBASIC-1.81□□□□□ -2.7
VPS13DQ5THJ4 RNU6-310P-201ENST00000384655 107 ntBASIC-1.81□□□□□ -2.7
VPS13DQ5THJ4 SNORD37.1-201ENST00000390968 65 ntBASIC-1.81□□□□□ -2.7
VPS13DQ5THJ4 SNORA79-201ENST00000408376 140 ntBASIC-1.81□□□□□ -2.7
VPS13DQ5THJ4 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC-1.81□□□□□ -2.7
VPS13DQ5THJ4 AL132765.2-201ENST00000610812 351 ntBASIC-1.81□□□□□ -2.7
VPS13DQ5THJ4 RNU6-888P-201ENST00000363010 101 ntBASIC-1.81□□□□□ -2.7
VPS13DQ5THJ4 RNU6-809P-201ENST00000384461 107 ntBASIC-1.81□□□□□ -2.7
VPS13DQ5THJ4 RNU6-65P-201ENST00000516332 98 ntBASIC-1.81□□□□□ -2.7
VPS13DQ5THJ4 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.82□□□□□ -2.7
Retrieved 100 of 98,524 protein–RNA pairs in 270.4 ms