Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 RN7SKP223-201ENST00000410582 62 ntBASIC2.17□□□□□ -2.06
RNFT1Q5M7Z0 RPL23AP42-201ENST00000471152 471 ntBASIC2.17□□□□□ -2.06
RNFT1Q5M7Z0 RNU6-287P-201ENST00000516230 98 ntBASIC2.17□□□□□ -2.06
RNFT1Q5M7Z0 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.17□□□□□ -2.06
RNFT1Q5M7Z0 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.17□□□□□ -2.06
RNFT1Q5M7Z0 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
RNFT1Q5M7Z0 MIR6073-201ENST00000352083 89 ntBASIC2.16□□□□□ -2.06
RNFT1Q5M7Z0 MIR103A2-201ENST00000362154 78 ntBASIC2.16□□□□□ -2.06
RNFT1Q5M7Z0 RNA5SP264-201ENST00000363115 107 ntBASIC2.16□□□□□ -2.06
RNFT1Q5M7Z0 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
RNFT1Q5M7Z0 RNA5SP450-201ENST00000411206 102 ntBASIC2.16□□□□□ -2.06
RNFT1Q5M7Z0 JTBP1-201ENST00000441314 247 ntBASIC2.16□□□□□ -2.06
RNFT1Q5M7Z0 RNU6-122P-201ENST00000516818 107 ntBASIC2.16□□□□□ -2.06
RNFT1Q5M7Z0 IGLVVI-22-1-201ENST00000521183 211 ntBASIC2.16□□□□□ -2.06
RNFT1Q5M7Z0 MIR3938-201ENST00000582157 103 ntBASIC2.16□□□□□ -2.06
RNFT1Q5M7Z0 MIR1291-201ENST00000627649 87 ntBASIC2.16□□□□□ -2.06
RNFT1Q5M7Z0 RNU6-495P-201ENST00000362995 107 ntBASIC2.15□□□□□ -2.07
RNFT1Q5M7Z0 SNORD113-4-201ENST00000364802 75 ntBASIC2.15□□□□□ -2.07
RNFT1Q5M7Z0 MIR144-201ENST00000384886 86 ntBASIC2.15□□□□□ -2.07
RNFT1Q5M7Z0 MIR216B-201ENST00000390186 82 ntBASIC2.15□□□□□ -2.07
RNFT1Q5M7Z0 RNA5SP95-201ENST00000410319 137 ntBASIC2.15□□□□□ -2.07
RNFT1Q5M7Z0 RNA5SP425-201ENST00000410336 112 ntBASIC2.15□□□□□ -2.07
RNFT1Q5M7Z0 AC015688.6-201ENST00000577737 104 ntBASIC2.15□□□□□ -2.07
RNFT1Q5M7Z0 MIR6840-201ENST00000611937 71 ntBASIC2.15□□□□□ -2.07
RNFT1Q5M7Z0 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
RNFT1Q5M7Z0 DEFA7P-201ENST00000382676 285 ntBASIC2.14□□□□□ -2.07
RNFT1Q5M7Z0 MIR6509-201ENST00000614603 85 ntBASIC2.14□□□□□ -2.07
RNFT1Q5M7Z0 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.14□□□□□ -2.07
RNFT1Q5M7Z0 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
RNFT1Q5M7Z0 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
RNFT1Q5M7Z0 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.13□□□□□ -2.07
RNFT1Q5M7Z0 RNA5SP215-201ENST00000363440 122 ntBASIC2.13□□□□□ -2.07
RNFT1Q5M7Z0 RNU6-645P-201ENST00000364649 106 ntBASIC2.13□□□□□ -2.07
RNFT1Q5M7Z0 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
RNFT1Q5M7Z0 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC2.13□□□□□ -2.07
RNFT1Q5M7Z0 AC244505.6-201ENST00000452829 130 ntBASIC2.13□□□□□ -2.07
RNFT1Q5M7Z0 SNORA31.11-201ENST00000516528 139 ntBASIC2.13□□□□□ -2.07
RNFT1Q5M7Z0 RNA5SP402-201ENST00000517148 110 ntBASIC2.13□□□□□ -2.07
RNFT1Q5M7Z0 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
RNFT1Q5M7Z0 MIR17-201ENST00000385012 84 ntBASIC2.12□□□□□ -2.07
RNFT1Q5M7Z0 RNA5SP299-201ENST00000391203 116 ntBASIC2.12□□□□□ -2.07
RNFT1Q5M7Z0 RNU6ATAC6P-201ENST00000408132 126 ntBASIC2.12□□□□□ -2.07
RNFT1Q5M7Z0 snoU13.15-201ENST00000459407 104 ntBASIC2.12□□□□□ -2.07
RNFT1Q5M7Z0 MIR4648-201ENST00000580107 72 ntBASIC2.12□□□□□ -2.07
RNFT1Q5M7Z0 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.12□□□□□ -2.07
RNFT1Q5M7Z0 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.11□□□□□ -2.07
RNFT1Q5M7Z0 RNA5SP181-201ENST00000410246 98 ntBASIC2.11□□□□□ -2.07
RNFT1Q5M7Z0 AL356320.1-201ENST00000429616 163 ntBASIC2.11□□□□□ -2.07
RNFT1Q5M7Z0 snoU13.26-201ENST00000459452 105 ntBASIC2.11□□□□□ -2.07
RNFT1Q5M7Z0 RNU6-947P-201ENST00000516264 106 ntBASIC2.11□□□□□ -2.07
RNFT1Q5M7Z0 AL359851.1-201ENST00000569460 4997 ntBASIC2.11□□□□□ -2.07
RNFT1Q5M7Z0 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
RNFT1Q5M7Z0 MIR7-2-201ENST00000384970 110 ntBASIC2.1□□□□□ -2.07
RNFT1Q5M7Z0 MIR125B2-201ENST00000385128 89 ntBASIC2.1□□□□□ -2.07
RNFT1Q5M7Z0 RNA5SP233-201ENST00000459153 113 ntBASIC2.1□□□□□ -2.07
RNFT1Q5M7Z0 MIR1273D-201ENST00000577266 86 ntBASIC2.1□□□□□ -2.07
RNFT1Q5M7Z0 MIR5694-201ENST00000581190 76 ntBASIC2.1□□□□□ -2.07
RNFT1Q5M7Z0 RNU6-92P-201ENST00000605893 104 ntBASIC2.1□□□□□ -2.07
RNFT1Q5M7Z0 MIR21-201ENST00000362134 72 ntBASIC2.09□□□□□ -2.07
RNFT1Q5M7Z0 RNA5SP432-201ENST00000362480 116 ntBASIC2.09□□□□□ -2.07
RNFT1Q5M7Z0 RNA5SP245-201ENST00000364239 121 ntBASIC2.09□□□□□ -2.07
RNFT1Q5M7Z0 RNU6-535P-201ENST00000384722 107 ntBASIC2.09□□□□□ -2.07
RNFT1Q5M7Z0 snoU13.21-201ENST00000459368 105 ntBASIC2.09□□□□□ -2.07
RNFT1Q5M7Z0 MIR5007-201ENST00000583098 95 ntBASIC2.09□□□□□ -2.07
RNFT1Q5M7Z0 AL645939.4-201ENST00000604495 135 ntBASIC2.09□□□□□ -2.07
RNFT1Q5M7Z0 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
RNFT1Q5M7Z0 RNU6-302P-201ENST00000365249 107 ntBASIC2.08□□□□□ -2.08
RNFT1Q5M7Z0 SUMO2P12-201ENST00000405924 140 ntBASIC2.08□□□□□ -2.08
RNFT1Q5M7Z0 AL356379.1-201ENST00000414105 126 ntBASIC2.08□□□□□ -2.08
RNFT1Q5M7Z0 NAMPTP3-201ENST00000569273 224 ntBASIC2.08□□□□□ -2.08
RNFT1Q5M7Z0 MIR4287-201ENST00000579398 78 ntBASIC2.08□□□□□ -2.08
RNFT1Q5M7Z0 MIR3657-201ENST00000584818 117 ntBASIC2.08□□□□□ -2.08
RNFT1Q5M7Z0 AC008608.1-201ENST00000603910 127 ntBASIC2.08□□□□□ -2.08
RNFT1Q5M7Z0 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.08□□□□□ -2.08
RNFT1Q5M7Z0 SNORD83.1-201ENST00000411362 77 ntBASIC2.07□□□□□ -2.08
RNFT1Q5M7Z0 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
RNFT1Q5M7Z0 RNU7-13P-201ENST00000516413 62 ntBASIC2.07□□□□□ -2.08
RNFT1Q5M7Z0 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.06□□□□□ -2.08
RNFT1Q5M7Z0 RNU6-934P-201ENST00000365154 107 ntBASIC2.06□□□□□ -2.08
RNFT1Q5M7Z0 MIR203A-201ENST00000384836 110 ntBASIC2.06□□□□□ -2.08
RNFT1Q5M7Z0 RNU6-237P-201ENST00000515985 71 ntBASIC2.06□□□□□ -2.08
RNFT1Q5M7Z0 MIR7843-201ENST00000622274 79 ntBASIC2.06□□□□□ -2.08
RNFT1Q5M7Z0 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.06□□□□□ -2.08
RNFT1Q5M7Z0 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
RNFT1Q5M7Z0 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
RNFT1Q5M7Z0 RNU6-1126P-201ENST00000384002 107 ntBASIC2.05□□□□□ -2.08
RNFT1Q5M7Z0 SNORA64-201ENST00000384674 134 ntBASIC2.05□□□□□ -2.08
RNFT1Q5M7Z0 MIR221-201ENST00000385135 110 ntBASIC2.05□□□□□ -2.08
RNFT1Q5M7Z0 MIR1289-2-201ENST00000408360 111 ntBASIC2.05□□□□□ -2.08
RNFT1Q5M7Z0 RNU4-88P-201ENST00000411220 86 ntBASIC2.05□□□□□ -2.08
RNFT1Q5M7Z0 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
RNFT1Q5M7Z0 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
RNFT1Q5M7Z0 RNU6-260P-201ENST00000384092 107 ntBASIC2.04□□□□□ -2.08
RNFT1Q5M7Z0 SNORA67.3-201ENST00000384366 140 ntBASIC2.04□□□□□ -2.08
RNFT1Q5M7Z0 MIR548AG2-201ENST00000581228 64 ntBASIC2.04□□□□□ -2.08
RNFT1Q5M7Z0 MIR548O2-201ENST00000616090 70 ntBASIC2.04□□□□□ -2.08
RNFT1Q5M7Z0 MIR6873-201ENST00000622788 63 ntBASIC2.04□□□□□ -2.08
RNFT1Q5M7Z0 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
RNFT1Q5M7Z0 SNORD60.1-201ENST00000362451 73 ntBASIC2.03□□□□□ -2.08
RNFT1Q5M7Z0 SNORD113.3-201ENST00000364630 78 ntBASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 220.4 ms