Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 RNU7-169P-201ENST00000459456 61 ntBASIC-3.15□□□□□ -2.91
CCDC58Q4VC31 RNU6-764P-201ENST00000516396 105 ntBASIC-3.15□□□□□ -2.91
CCDC58Q4VC31 RNU6-719P-201ENST00000516671 104 ntBASIC-3.15□□□□□ -2.91
CCDC58Q4VC31 NBR2-204ENST00000587322 63 ntBASIC-3.15□□□□□ -2.91
CCDC58Q4VC31 Y_RNA.257-201ENST00000364596 102 ntBASIC-3.16□□□□□ -2.92
CCDC58Q4VC31 Y_RNA.404-201ENST00000383978 102 ntBASIC-3.16□□□□□ -2.92
CCDC58Q4VC31 MIR34C-201ENST00000384831 77 ntBASIC-3.16□□□□□ -2.92
CCDC58Q4VC31 MIR548Q-201ENST00000408404 100 ntBASIC-3.16□□□□□ -2.92
CCDC58Q4VC31 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC-3.16□□□□□ -2.92
CCDC58Q4VC31 RN7SKP298-201ENST00000515950 94 ntBASIC-3.16□□□□□ -2.92
CCDC58Q4VC31 RNU6-911P-201ENST00000516523 104 ntBASIC-3.16□□□□□ -2.92
CCDC58Q4VC31 Y_RNA.704-201ENST00000516851 102 ntBASIC-3.16□□□□□ -2.92
CCDC58Q4VC31 MIR4748-201ENST00000578076 82 ntBASIC-3.16□□□□□ -2.92
CCDC58Q4VC31 RNU6-608P-201ENST00000383927 104 ntBASIC-3.17□□□□□ -2.92
CCDC58Q4VC31 MIR519A2-201ENST00000384990 87 ntBASIC-3.17□□□□□ -2.92
CCDC58Q4VC31 RNU6-1228P-201ENST00000391014 107 ntBASIC-3.17□□□□□ -2.92
CCDC58Q4VC31 U2.1-201ENST00000618978 145 ntBASIC-3.17□□□□□ -2.92
CCDC58Q4VC31 Y_RNA.525-201ENST00000384570 113 ntBASIC-3.18□□□□□ -2.92
CCDC58Q4VC31 RNU6-246P-201ENST00000384702 107 ntBASIC-3.18□□□□□ -2.92
CCDC58Q4VC31 RNU6-908P-201ENST00000410160 94 ntBASIC-3.18□□□□□ -2.92
CCDC58Q4VC31 RNU6-451P-201ENST00000362921 107 ntBASIC-3.19□□□□□ -2.92
CCDC58Q4VC31 SNORA15B-2-201ENST00000384058 135 ntBASIC-3.19□□□□□ -2.92
CCDC58Q4VC31 SNORD63-201ENST00000384262 68 ntBASIC-3.19□□□□□ -2.92
CCDC58Q4VC31 SNORA15B-1-201ENST00000384334 135 ntBASIC-3.19□□□□□ -2.92
CCDC58Q4VC31 Y_RNA.605-201ENST00000410577 105 ntBASIC-3.19□□□□□ -2.92
CCDC58Q4VC31 RNU4-69P-201ENST00000410677 143 ntBASIC-3.19□□□□□ -2.92
CCDC58Q4VC31 MTND3P10-201ENST00000450967 341 ntBASIC-3.19□□□□□ -2.92
CCDC58Q4VC31 SNRPGP8-201ENST00000454064 226 ntBASIC-3.19□□□□□ -2.92
CCDC58Q4VC31 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC-3.19□□□□□ -2.92
CCDC58Q4VC31 RNU6-1281P-201ENST00000516223 105 ntBASIC-3.19□□□□□ -2.92
CCDC58Q4VC31 RNU6-1149P-201ENST00000516810 97 ntBASIC-3.19□□□□□ -2.92
CCDC58Q4VC31 RNU6-1174P-201ENST00000517278 101 ntBASIC-3.19□□□□□ -2.92
CCDC58Q4VC31 C8orf59P2-201ENST00000603441 271 ntBASIC-3.19□□□□□ -2.92
CCDC58Q4VC31 Y_RNA.772-201ENST00000606692 102 ntBASIC-3.19□□□□□ -2.92
CCDC58Q4VC31 DLEU2_3.1-201ENST00000620005 73 ntBASIC-3.19□□□□□ -2.92
CCDC58Q4VC31 AP000720.1-201ENST00000625091 483 ntBASIC-3.19□□□□□ -2.92
CCDC58Q4VC31 Y_RNA.173-201ENST00000363776 113 ntBASIC-3.2□□□□□ -2.92
CCDC58Q4VC31 RNY3P11-201ENST00000364153 102 ntBASIC-3.2□□□□□ -2.92
CCDC58Q4VC31 RNU6-563P-201ENST00000364872 108 ntBASIC-3.2□□□□□ -2.92
CCDC58Q4VC31 RNU6-1034P-201ENST00000365335 101 ntBASIC-3.2□□□□□ -2.92
CCDC58Q4VC31 PMCHL1-202ENST00000423102 261 ntBASIC-3.2□□□□□ -2.92
CCDC58Q4VC31 RNU2-35P-201ENST00000516446 142 ntBASIC-3.2□□□□□ -2.92
CCDC58Q4VC31 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-3.2□□□□□ -2.92
CCDC58Q4VC31 AC009094.1-201ENST00000564443 426 ntBASIC-3.2□□□□□ -2.92
CCDC58Q4VC31 AC120024.2-201ENST00000576526 175 ntBASIC-3.2□□□□□ -2.92
CCDC58Q4VC31 AC090617.10-201ENST00000624308 134 ntBASIC-3.2□□□□□ -2.92
CCDC58Q4VC31 MIR620-201ENST00000385232 95 ntBASIC-3.21□□□□□ -2.92
CCDC58Q4VC31 Y_RNA.582-201ENST00000391023 95 ntBASIC-3.21□□□□□ -2.92
CCDC58Q4VC31 Y_RNA.622-201ENST00000411091 108 ntBASIC-3.21□□□□□ -2.92
CCDC58Q4VC31 AL138825.1-201ENST00000618587 192 ntBASIC-3.21□□□□□ -2.92
CCDC58Q4VC31 Y_RNA.228-201ENST00000364346 98 ntBASIC-3.22□□□□□ -2.92
CCDC58Q4VC31 Y_RNA.344-201ENST00000365381 112 ntBASIC-3.22□□□□□ -2.92
CCDC58Q4VC31 Y_RNA.418-201ENST00000384029 102 ntBASIC-3.22□□□□□ -2.92
CCDC58Q4VC31 SNORA19.1-201ENST00000410656 129 ntBASIC-3.22□□□□□ -2.92
CCDC58Q4VC31 AC082651.2-201ENST00000496833 166 ntBASIC-3.22□□□□□ -2.92
CCDC58Q4VC31 FGF7P7-201ENST00000514120 227 ntBASIC-3.22□□□□□ -2.92
CCDC58Q4VC31 AC006006.1-201ENST00000603082 144 ntBASIC-3.22□□□□□ -2.92
CCDC58Q4VC31 MIR6863-201ENST00000636112 90 ntBASIC-3.22□□□□□ -2.92
CCDC58Q4VC31 Y_RNA.424-201ENST00000384063 103 ntBASIC-3.23□□□□□ -2.93
CCDC58Q4VC31 MIR548A1-201ENST00000385041 97 ntBASIC-3.23□□□□□ -2.93
CCDC58Q4VC31 MRPS35P2-201ENST00000508242 191 ntBASIC-3.23□□□□□ -2.93
CCDC58Q4VC31 RNU6-507P-201ENST00000516045 100 ntBASIC-3.23□□□□□ -2.93
CCDC58Q4VC31 Y_RNA.691-201ENST00000516611 103 ntBASIC-3.23□□□□□ -2.93
CCDC58Q4VC31 RNU6-1314P-201ENST00000517139 104 ntBASIC-3.23□□□□□ -2.93
CCDC58Q4VC31 MIR548AG1-201ENST00000579932 66 ntBASIC-3.23□□□□□ -2.93
CCDC58Q4VC31 PISRT1.1-201ENST00000616930 107 ntBASIC-3.23□□□□□ -2.93
CCDC58Q4VC31 RNA5SP93-201ENST00000362525 114 ntBASIC-3.24□□□□□ -2.93
CCDC58Q4VC31 RNY3P3-201ENST00000363816 102 ntBASIC-3.24□□□□□ -2.93
CCDC58Q4VC31 SNORA75-201ENST00000384158 137 ntBASIC-3.24□□□□□ -2.93
CCDC58Q4VC31 snoU13.17-201ENST00000458802 104 ntBASIC-3.24□□□□□ -2.93
CCDC58Q4VC31 MIR23C-201ENST00000579846 100 ntBASIC-3.24□□□□□ -2.93
CCDC58Q4VC31 RNU6-1272P-201ENST00000362776 107 ntBASIC-3.25□□□□□ -2.93
CCDC58Q4VC31 Y_RNA.80-201ENST00000362996 102 ntBASIC-3.25□□□□□ -2.93
CCDC58Q4VC31 Y_RNA.599-201ENST00000410489 109 ntBASIC-3.25□□□□□ -2.93
CCDC58Q4VC31 AC138393.2-201ENST00000414742 246 ntBASIC-3.25□□□□□ -2.93
CCDC58Q4VC31 RNU6-728P-201ENST00000365375 104 ntBASIC-3.26□□□□□ -2.93
CCDC58Q4VC31 MTND1P1-201ENST00000445453 368 ntBASIC-3.26□□□□□ -2.93
CCDC58Q4VC31 Y_RNA.682-201ENST00000516457 100 ntBASIC-3.26□□□□□ -2.93
CCDC58Q4VC31 RNU6-90P-201ENST00000606352 106 ntBASIC-3.26□□□□□ -2.93
CCDC58Q4VC31 RNU6-1094P-201ENST00000362416 104 ntBASIC-3.27□□□□□ -2.93
CCDC58Q4VC31 Y_RNA.24-201ENST00000362508 103 ntBASIC-3.27□□□□□ -2.93
CCDC58Q4VC31 Y_RNA.286-201ENST00000364813 102 ntBASIC-3.27□□□□□ -2.93
CCDC58Q4VC31 Y_RNA.299-201ENST00000364973 94 ntBASIC-3.27□□□□□ -2.93
CCDC58Q4VC31 RNY4P28-201ENST00000365281 93 ntBASIC-3.27□□□□□ -2.93
CCDC58Q4VC31 RNU6-937P-201ENST00000384325 106 ntBASIC-3.27□□□□□ -2.93
CCDC58Q4VC31 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC-3.27□□□□□ -2.93
CCDC58Q4VC31 RNU7-24P-201ENST00000458867 62 ntBASIC-3.27□□□□□ -2.93
CCDC58Q4VC31 RNA5SP147-201ENST00000516493 109 ntBASIC-3.27□□□□□ -2.93
CCDC58Q4VC31 AL359880.1-201ENST00000621879 266 ntBASIC-3.27□□□□□ -2.93
CCDC58Q4VC31 Y_RNA.298-201ENST00000364960 107 ntBASIC-3.28□□□□□ -2.93
CCDC58Q4VC31 RNU6-616P-201ENST00000384353 107 ntBASIC-3.28□□□□□ -2.93
CCDC58Q4VC31 RNU6-358P-201ENST00000516564 75 ntBASIC-3.28□□□□□ -2.93
CCDC58Q4VC31 SNORD113-5-201ENST00000607261 78 ntBASIC-3.28□□□□□ -2.93
CCDC58Q4VC31 SNORD115-31-201ENST00000365318 82 ntBASIC-3.29□□□□□ -2.94
CCDC58Q4VC31 Y_RNA.357-201ENST00000365487 109 ntBASIC-3.29□□□□□ -2.94
CCDC58Q4VC31 RNU6-483P-201ENST00000384088 108 ntBASIC-3.29□□□□□ -2.94
CCDC58Q4VC31 SNORD38.2-201ENST00000384470 69 ntBASIC-3.29□□□□□ -2.94
CCDC58Q4VC31 SNORD77B-201ENST00000391112 67 ntBASIC-3.29□□□□□ -2.94
CCDC58Q4VC31 RNU6-518P-201ENST00000516056 96 ntBASIC-3.29□□□□□ -2.94
CCDC58Q4VC31 RNU6-1234P-201ENST00000516877 103 ntBASIC-3.29□□□□□ -2.94
Retrieved 100 of 98,524 protein–RNA pairs in 215.3 ms