Protein–RNA interactions for Protein: Q12986

NFX1, Transcriptional repressor NF-X1, humanhuman

Known RBP Predictions only

Length 1,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFX1Q12986 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.54□□□□□ -2
NFX1Q12986 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.54□□□□□ -2
NFX1Q12986 RNU7-119P-201ENST00000459279 63 ntBASIC2.54□□□□□ -2
NFX1Q12986 RNU6-1265P-201ENST00000516342 103 ntBASIC2.54□□□□□ -2
NFX1Q12986 MIR4264-201ENST00000583520 66 ntBASIC2.54□□□□□ -2
NFX1Q12986 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.54□□□□□ -2
NFX1Q12986 MIR21-201ENST00000362134 72 ntBASIC2.53□□□□□ -2
NFX1Q12986 RNU6-495P-201ENST00000362995 107 ntBASIC2.53□□□□□ -2
NFX1Q12986 RNA5SP48-201ENST00000363969 126 ntBASIC2.53□□□□□ -2
NFX1Q12986 RNU6-994P-201ENST00000410507 111 ntBASIC2.53□□□□□ -2
NFX1Q12986 RNU7-62P-201ENST00000458856 62 ntBASIC2.53□□□□□ -2
NFX1Q12986 RNU6-656P-201ENST00000516785 107 ntBASIC2.53□□□□□ -2
NFX1Q12986 DEFB122-202ENST00000569013 197 ntBASIC2.53□□□□□ -2
NFX1Q12986 MIR4287-201ENST00000579398 78 ntBASIC2.53□□□□□ -2
NFX1Q12986 MIR3657-201ENST00000584818 117 ntBASIC2.53□□□□□ -2
NFX1Q12986 AC013244.2-201ENST00000603396 103 ntBASIC2.53□□□□□ -2
NFX1Q12986 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.53□□□□□ -2.01
NFX1Q12986 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.53□□□□□ -2.01
NFX1Q12986 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
NFX1Q12986 RNU6-403P-201ENST00000363163 104 ntBASIC2.52□□□□□ -2.01
NFX1Q12986 MIR630-201ENST00000384957 97 ntBASIC2.52□□□□□ -2.01
NFX1Q12986 RNA5SP212-201ENST00000391223 107 ntBASIC2.52□□□□□ -2.01
NFX1Q12986 SNORD93-201ENST00000408813 74 ntBASIC2.52□□□□□ -2.01
NFX1Q12986 MIR6840-201ENST00000611937 71 ntBASIC2.52□□□□□ -2.01
NFX1Q12986 Evf-2_5p.1-201ENST00000614213 142 ntBASIC2.52□□□□□ -2.01
NFX1Q12986 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.52□□□□□ -2.01
NFX1Q12986 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
NFX1Q12986 RNU6-396P-201ENST00000365369 105 ntBASIC2.51□□□□□ -2.01
NFX1Q12986 MIR7-2-201ENST00000384970 110 ntBASIC2.51□□□□□ -2.01
NFX1Q12986 MIR599-201ENST00000385069 95 ntBASIC2.51□□□□□ -2.01
NFX1Q12986 snoU13.23-201ENST00000458863 104 ntBASIC2.51□□□□□ -2.01
NFX1Q12986 NAMPTP3-201ENST00000569273 224 ntBASIC2.51□□□□□ -2.01
NFX1Q12986 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.51□□□□□ -2.01
NFX1Q12986 MIR5007-201ENST00000583098 95 ntBASIC2.51□□□□□ -2.01
NFX1Q12986 AL137847.3-201ENST00000611521 109 ntBASIC2.51□□□□□ -2.01
NFX1Q12986 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.5□□□□□ -2.01
NFX1Q12986 AC108210.2-201ENST00000503681 201 ntBASIC2.5□□□□□ -2.01
NFX1Q12986 AP000942.3-201ENST00000603702 160 ntBASIC2.5□□□□□ -2.01
NFX1Q12986 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.5□□□□□ -2.01
NFX1Q12986 uc_338.6-201ENST00000613544 171 ntBASIC2.5□□□□□ -2.01
NFX1Q12986 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
NFX1Q12986 RNU6-838P-201ENST00000363399 108 ntBASIC2.49□□□□□ -2.01
NFX1Q12986 Y_RNA.224-201ENST00000364308 111 ntBASIC2.49□□□□□ -2.01
NFX1Q12986 MIR221-201ENST00000385135 110 ntBASIC2.49□□□□□ -2.01
NFX1Q12986 RNU6-360P-201ENST00000390944 104 ntBASIC2.49□□□□□ -2.01
NFX1Q12986 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC2.49□□□□□ -2.01
NFX1Q12986 RNU6-287P-201ENST00000516230 98 ntBASIC2.49□□□□□ -2.01
NFX1Q12986 RNA5SP402-201ENST00000517148 110 ntBASIC2.49□□□□□ -2.01
NFX1Q12986 RNU1-36P-201ENST00000365130 165 ntBASIC2.48□□□□□ -2.01
NFX1Q12986 SNORD113-2-201ENST00000391082 72 ntBASIC2.48□□□□□ -2.01
NFX1Q12986 MIR1289-2-201ENST00000408360 111 ntBASIC2.48□□□□□ -2.01
NFX1Q12986 AL773524.1-201ENST00000614065 229 ntBASIC2.48□□□□□ -2.01
NFX1Q12986 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
NFX1Q12986 RNU6-260P-201ENST00000384092 107 ntBASIC2.47□□□□□ -2.01
NFX1Q12986 MIR144-201ENST00000384886 86 ntBASIC2.47□□□□□ -2.01
NFX1Q12986 MIR17-201ENST00000385012 84 ntBASIC2.47□□□□□ -2.01
NFX1Q12986 RNU6-482P-201ENST00000391068 107 ntBASIC2.47□□□□□ -2.01
NFX1Q12986 MIR1302-7-201ENST00000408841 72 ntBASIC2.47□□□□□ -2.01
NFX1Q12986 RPL30P7-201ENST00000479312 323 ntBASIC2.47□□□□□ -2.01
NFX1Q12986 MT-TN-201ENST00000387400 73 ntBASIC2.46□□□□□ -2.02
NFX1Q12986 RNA5SP233-201ENST00000459153 113 ntBASIC2.46□□□□□ -2.02
NFX1Q12986 Y_RNA.676-201ENST00000516393 96 ntBASIC2.46□□□□□ -2.02
NFX1Q12986 AC138907.6-201ENST00000568401 126 ntBASIC2.46□□□□□ -2.02
NFX1Q12986 AC138869.1-201ENST00000568623 124 ntBASIC2.46□□□□□ -2.02
NFX1Q12986 MIR5694-201ENST00000581190 76 ntBASIC2.46□□□□□ -2.02
NFX1Q12986 MIR6739-201ENST00000622461 75 ntBASIC2.46□□□□□ -2.02
NFX1Q12986 SNORD114-1-201ENST00000362705 72 ntBASIC2.45□□□□□ -2.02
NFX1Q12986 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
NFX1Q12986 SNORA64-201ENST00000384674 134 ntBASIC2.45□□□□□ -2.02
NFX1Q12986 AC025033.1-201ENST00000463883 194 ntBASIC2.45□□□□□ -2.02
NFX1Q12986 MIR6766-201ENST00000622641 72 ntBASIC2.45□□□□□ -2.02
NFX1Q12986 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
NFX1Q12986 SNORA2.1-201ENST00000363089 137 ntBASIC2.44□□□□□ -2.02
NFX1Q12986 SNORA67.3-201ENST00000384366 140 ntBASIC2.44□□□□□ -2.02
NFX1Q12986 RNU6-322P-201ENST00000516010 103 ntBASIC2.44□□□□□ -2.02
NFX1Q12986 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.44□□□□□ -2.02
NFX1Q12986 SNORD111.1-201ENST00000516421 86 ntBASIC2.44□□□□□ -2.02
NFX1Q12986 IGLVVI-22-1-201ENST00000521183 211 ntBASIC2.44□□□□□ -2.02
NFX1Q12986 MIR548X-201ENST00000580069 75 ntBASIC2.44□□□□□ -2.02
NFX1Q12986 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
NFX1Q12986 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
NFX1Q12986 ZNF355P-201ENST00000427301 3216 ntBASIC2.43□□□□□ -2.02
NFX1Q12986 SNORD115-44-201ENST00000365391 82 ntBASIC2.43□□□□□ -2.02
NFX1Q12986 MIR548C-201ENST00000384815 97 ntBASIC2.43□□□□□ -2.02
NFX1Q12986 RNU6-231P-201ENST00000517122 103 ntBASIC2.43□□□□□ -2.02
NFX1Q12986 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
NFX1Q12986 RNU6-698P-201ENST00000363523 107 ntBASIC2.42□□□□□ -2.02
NFX1Q12986 RNU6-34P-201ENST00000364874 107 ntBASIC2.42□□□□□ -2.02
NFX1Q12986 Y_RNA.330-201ENST00000365230 109 ntBASIC2.42□□□□□ -2.02
NFX1Q12986 MIR653-201ENST00000385279 96 ntBASIC2.42□□□□□ -2.02
NFX1Q12986 MIR216B-201ENST00000390186 82 ntBASIC2.42□□□□□ -2.02
NFX1Q12986 MIR18B-201ENST00000454574 71 ntBASIC2.42□□□□□ -2.02
NFX1Q12986 MIR2115-201ENST00000516657 100 ntBASIC2.42□□□□□ -2.02
NFX1Q12986 AC015712.3-201ENST00000559380 164 ntBASIC2.42□□□□□ -2.02
NFX1Q12986 MIR6082-201ENST00000613604 109 ntBASIC2.42□□□□□ -2.02
NFX1Q12986 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
NFX1Q12986 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
NFX1Q12986 Y_RNA.13-201ENST00000362403 112 ntBASIC2.41□□□□□ -2.02
NFX1Q12986 AL356379.1-201ENST00000414105 126 ntBASIC2.41□□□□□ -2.02
NFX1Q12986 AL591806.2-201ENST00000433122 173 ntBASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 210.6 ms