Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 SNORA25-201ENST00000384384 134 ntBASIC1.01□□□□□ -2.25
LTBQ06643 RNU6-813P-201ENST00000384691 107 ntBASIC1.01□□□□□ -2.25
LTBQ06643 Y_RNA.567-201ENST00000384736 106 ntBASIC1.01□□□□□ -2.25
LTBQ06643 RPS26P5-201ENST00000418544 335 ntBASIC1.01□□□□□ -2.25
LTBQ06643 BX276092.1-201ENST00000427368 251 ntBASIC1.01□□□□□ -2.25
LTBQ06643 MIR4439-201ENST00000583746 80 ntBASIC1.01□□□□□ -2.25
LTBQ06643 AL590095.2-201ENST00000604136 117 ntBASIC1.01□□□□□ -2.25
LTBQ06643 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.01□□□□□ -2.25
LTBQ06643 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.01□□□□□ -2.25
LTBQ06643 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.01□□□□□ -2.25
LTBQ06643 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1□□□□□ -2.25
LTBQ06643 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
LTBQ06643 SNORD38.2-201ENST00000384470 69 ntBASIC1□□□□□ -2.25
LTBQ06643 SNORA72.6-201ENST00000384520 129 ntBASIC1□□□□□ -2.25
LTBQ06643 MIR1257-201ENST00000408490 117 ntBASIC1□□□□□ -2.25
LTBQ06643 RNU4-83P-201ENST00000410863 133 ntBASIC1□□□□□ -2.25
LTBQ06643 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1□□□□□ -2.25
LTBQ06643 MIR4676-201ENST00000583078 72 ntBASIC1□□□□□ -2.25
LTBQ06643 AC103810.7-201ENST00000607821 91 ntBASIC1□□□□□ -2.25
LTBQ06643 MIR8066-201ENST00000617280 78 ntBASIC1□□□□□ -2.25
LTBQ06643 MIR4679-1-201ENST00000637619 75 ntBASIC1□□□□□ -2.25
LTBQ06643 Y_RNA.13-201ENST00000362403 112 ntBASIC0.99□□□□□ -2.25
LTBQ06643 RNU6-1244P-201ENST00000363614 108 ntBASIC0.99□□□□□ -2.25
LTBQ06643 Y_RNA.190-201ENST00000363964 101 ntBASIC0.99□□□□□ -2.25
LTBQ06643 MIR125B2-201ENST00000385128 89 ntBASIC0.99□□□□□ -2.25
LTBQ06643 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
LTBQ06643 SNORD12-201ENST00000391002 90 ntBASIC0.99□□□□□ -2.25
LTBQ06643 SNRPGP12-201ENST00000449481 213 ntBASIC0.99□□□□□ -2.25
LTBQ06643 Y_RNA.705-201ENST00000516862 110 ntBASIC0.99□□□□□ -2.25
LTBQ06643 AC013244.2-201ENST00000603396 103 ntBASIC0.99□□□□□ -2.25
LTBQ06643 AC027335.2-201ENST00000624030 375 ntBASIC0.99□□□□□ -2.25
LTBQ06643 RNU1-124P-201ENST00000363861 145 ntBASIC0.98□□□□□ -2.25
LTBQ06643 RNU6-887P-201ENST00000410660 100 ntBASIC0.98□□□□□ -2.25
LTBQ06643 RNU6-850P-201ENST00000516934 103 ntBASIC0.98□□□□□ -2.25
LTBQ06643 RNU6-844P-201ENST00000517175 102 ntBASIC0.98□□□□□ -2.25
LTBQ06643 AC211469.2-201ENST00000605461 205 ntBASIC0.98□□□□□ -2.25
LTBQ06643 MIR6082-201ENST00000613604 109 ntBASIC0.98□□□□□ -2.25
LTBQ06643 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC0.98□□□□□ -2.25
LTBQ06643 RNU4-58P-201ENST00000363192 141 ntBASIC0.97□□□□□ -2.25
LTBQ06643 Y_RNA.220-201ENST00000364244 109 ntBASIC0.97□□□□□ -2.25
LTBQ06643 RNU6-294P-201ENST00000364999 102 ntBASIC0.97□□□□□ -2.25
LTBQ06643 SNORD58A-201ENST00000383875 65 ntBASIC0.97□□□□□ -2.25
LTBQ06643 MIR181B2-201ENST00000385004 89 ntBASIC0.97□□□□□ -2.25
LTBQ06643 RNU6-972P-201ENST00000391208 107 ntBASIC0.97□□□□□ -2.25
LTBQ06643 RNU6-994P-201ENST00000410507 111 ntBASIC0.97□□□□□ -2.25
LTBQ06643 RNU7-156P-201ENST00000517214 74 ntBASIC0.97□□□□□ -2.25
LTBQ06643 AC006254.2-201ENST00000603259 279 ntBASIC0.97□□□□□ -2.25
LTBQ06643 SNORD114-21-201ENST00000606412 72 ntBASIC0.97□□□□□ -2.25
LTBQ06643 Y_RNA.42-201ENST00000362660 108 ntBASIC0.96□□□□□ -2.26
LTBQ06643 RNA5SP395-201ENST00000516567 118 ntBASIC0.96□□□□□ -2.26
LTBQ06643 RNA5SP404-201ENST00000517118 132 ntBASIC0.96□□□□□ -2.26
LTBQ06643 CYP3A137P-201ENST00000562436 69 ntBASIC0.96□□□□□ -2.26
LTBQ06643 MIR4804-201ENST00000581683 73 ntBASIC0.96□□□□□ -2.26
LTBQ06643 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.96□□□□□ -2.26
LTBQ06643 AC008608.1-201ENST00000603910 127 ntBASIC0.96□□□□□ -2.26
LTBQ06643 AC025521.1-201ENST00000621624 286 ntBASIC0.96□□□□□ -2.26
LTBQ06643 MIR19B1-201ENST00000384829 87 ntBASIC0.95□□□□□ -2.26
LTBQ06643 MIR100-201ENST00000385259 80 ntBASIC0.95□□□□□ -2.26
LTBQ06643 AC026421.1-201ENST00000519101 163 ntBASIC0.95□□□□□ -2.26
LTBQ06643 SNORD92-201ENST00000585078 85 ntBASIC0.95□□□□□ -2.26
LTBQ06643 MIR1-1-201ENST00000362147 71 ntBASIC0.94□□□□□ -2.26
LTBQ06643 Y_RNA.96-201ENST00000363092 109 ntBASIC0.94□□□□□ -2.26
LTBQ06643 RNU6-571P-201ENST00000384128 107 ntBASIC0.94□□□□□ -2.26
LTBQ06643 MIR938-201ENST00000401216 83 ntBASIC0.94□□□□□ -2.26
LTBQ06643 SNORD100-201ENST00000408573 76 ntBASIC0.94□□□□□ -2.26
LTBQ06643 RNU7-56P-201ENST00000458744 62 ntBASIC0.94□□□□□ -2.26
LTBQ06643 RNU7-102P-201ENST00000458948 62 ntBASIC0.94□□□□□ -2.26
LTBQ06643 RNU7-106P-201ENST00000459514 67 ntBASIC0.94□□□□□ -2.26
LTBQ06643 OR2A41P-201ENST00000473586 105 ntBASIC0.94□□□□□ -2.26
LTBQ06643 RNU6-977P-201ENST00000516411 103 ntBASIC0.94□□□□□ -2.26
LTBQ06643 AL513043.2-201ENST00000573941 143 ntBASIC0.94□□□□□ -2.26
LTBQ06643 MIR924-201ENST00000638017 53 ntBASIC0.94□□□□□ -2.26
LTBQ06643 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
LTBQ06643 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.93□□□□□ -2.26
LTBQ06643 RNU6-1125P-201ENST00000363601 107 ntBASIC0.93□□□□□ -2.26
LTBQ06643 RNU6-480P-201ENST00000384332 107 ntBASIC0.93□□□□□ -2.26
LTBQ06643 RNU6-364P-201ENST00000384387 107 ntBASIC0.93□□□□□ -2.26
LTBQ06643 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
LTBQ06643 MIR1827-201ENST00000408549 66 ntBASIC0.93□□□□□ -2.26
LTBQ06643 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.93□□□□□ -2.26
LTBQ06643 SNORD124-201ENST00000459577 104 ntBASIC0.93□□□□□ -2.26
LTBQ06643 RNA5SP476-201ENST00000516613 103 ntBASIC0.93□□□□□ -2.26
LTBQ06643 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
LTBQ06643 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
LTBQ06643 MIR373-201ENST00000362273 69 ntBASIC0.92□□□□□ -2.26
LTBQ06643 Y_RNA.57-201ENST00000362806 113 ntBASIC0.92□□□□□ -2.26
LTBQ06643 RNA5SP62-201ENST00000363457 110 ntBASIC0.92□□□□□ -2.26
LTBQ06643 SNORD73B-201ENST00000364394 72 ntBASIC0.92□□□□□ -2.26
LTBQ06643 MIR516A2-201ENST00000384888 90 ntBASIC0.92□□□□□ -2.26
LTBQ06643 MIR516A1-201ENST00000385033 90 ntBASIC0.92□□□□□ -2.26
LTBQ06643 TRAJ51-201ENST00000504127 63 ntBASIC0.92□□□□□ -2.26
LTBQ06643 RNU6-1194P-201ENST00000516208 104 ntBASIC0.92□□□□□ -2.26
LTBQ06643 RNU6-765P-201ENST00000516916 99 ntBASIC0.92□□□□□ -2.26
LTBQ06643 RNU6-762P-201ENST00000517107 102 ntBASIC0.92□□□□□ -2.26
LTBQ06643 AC103810.9-201ENST00000606688 112 ntBASIC0.92□□□□□ -2.26
LTBQ06643 MIR101-2-201ENST00000362195 79 ntBASIC0.91□□□□□ -2.26
LTBQ06643 RNA5SP257-201ENST00000363023 116 ntBASIC0.91□□□□□ -2.26
LTBQ06643 SNORD116-10-201ENST00000363791 102 ntBASIC0.91□□□□□ -2.26
LTBQ06643 MIR520F-201ENST00000384824 87 ntBASIC0.91□□□□□ -2.26
LTBQ06643 SNORD89-201ENST00000390981 114 ntBASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 249.4 ms