Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 SNORD77B-201ENST00000391112 67 ntBASIC-0.57□□□□□ -2.5
VSX2P58304 MIR548H3-201ENST00000408771 118 ntBASIC-0.57□□□□□ -2.5
VSX2P58304 MTATP6P21-201ENST00000440681 189 ntBASIC-0.57□□□□□ -2.5
VSX2P58304 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-0.57□□□□□ -2.5
VSX2P58304 MIR4432-201ENST00000581823 84 ntBASIC-0.57□□□□□ -2.5
VSX2P58304 AC108081.1-201ENST00000604358 221 ntBASIC-0.57□□□□□ -2.5
VSX2P58304 uc_338.10-201ENST00000621872 182 ntBASIC-0.57□□□□□ -2.5
VSX2P58304 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-0.57□□□□□ -2.5
VSX2P58304 MIR6844-201ENST00000637122 62 ntBASIC-0.57□□□□□ -2.5
VSX2P58304 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.57□□□□□ -2.5
VSX2P58304 SNORD114-11-201ENST00000363738 75 ntBASIC-0.58□□□□□ -2.5
VSX2P58304 RNU6-480P-201ENST00000384332 107 ntBASIC-0.58□□□□□ -2.5
VSX2P58304 Y_RNA.556-201ENST00000384677 113 ntBASIC-0.58□□□□□ -2.5
VSX2P58304 Y_RNA.686-201ENST00000516548 134 ntBASIC-0.58□□□□□ -2.5
VSX2P58304 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.58□□□□□ -2.5
VSX2P58304 MIR4436A-201ENST00000585278 85 ntBASIC-0.58□□□□□ -2.5
VSX2P58304 Y_RNA.288-201ENST00000364854 92 ntBASIC-0.59□□□□□ -2.5
VSX2P58304 Y_RNA.360-201ENST00000365512 102 ntBASIC-0.59□□□□□ -2.5
VSX2P58304 Y_RNA.422-201ENST00000384054 114 ntBASIC-0.59□□□□□ -2.5
VSX2P58304 RNU6-571P-201ENST00000384128 107 ntBASIC-0.59□□□□□ -2.5
VSX2P58304 RNU6-1160P-201ENST00000384546 104 ntBASIC-0.59□□□□□ -2.5
VSX2P58304 MIR617-201ENST00000385030 97 ntBASIC-0.59□□□□□ -2.5
VSX2P58304 MT-TI-201ENST00000387365 69 ntBASIC-0.59□□□□□ -2.5
VSX2P58304 SNORA75.5-201ENST00000391291 81 ntBASIC-0.59□□□□□ -2.5
VSX2P58304 AL603914.1-201ENST00000401964 204 ntBASIC-0.59□□□□□ -2.5
VSX2P58304 RNU7-74P-201ENST00000459104 62 ntBASIC-0.59□□□□□ -2.5
VSX2P58304 AC114755.3-201ENST00000481111 251 ntBASIC-0.59□□□□□ -2.5
VSX2P58304 Y_RNA.680-201ENST00000516441 93 ntBASIC-0.59□□□□□ -2.5
VSX2P58304 RNY4P20-201ENST00000516678 93 ntBASIC-0.59□□□□□ -2.5
VSX2P58304 RNU6-175P-201ENST00000516896 107 ntBASIC-0.59□□□□□ -2.5
VSX2P58304 AL117187.1-201ENST00000555482 181 ntBASIC-0.59□□□□□ -2.5
VSX2P58304 MIR4263-201ENST00000584745 83 ntBASIC-0.59□□□□□ -2.5
VSX2P58304 AC008737.2-201ENST00000599446 118 ntBASIC-0.59□□□□□ -2.5
VSX2P58304 Y_RNA.773-201ENST00000607168 90 ntBASIC-0.59□□□□□ -2.5
VSX2P58304 AC069503.3-201ENST00000618674 145 ntBASIC-0.59□□□□□ -2.5
VSX2P58304 AC087741.2-201ENST00000619415 172 ntBASIC-0.59□□□□□ -2.5
VSX2P58304 Y_RNA.20-201ENST00000362479 113 ntBASIC-0.6□□□□□ -2.51
VSX2P58304 SNORD114-15-201ENST00000364687 72 ntBASIC-0.6□□□□□ -2.51
VSX2P58304 RNY4P3-201ENST00000365254 95 ntBASIC-0.6□□□□□ -2.51
VSX2P58304 Y_RNA.342-201ENST00000365352 113 ntBASIC-0.6□□□□□ -2.51
VSX2P58304 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.6□□□□□ -2.51
VSX2P58304 MIR3658-201ENST00000636291 56 ntBASIC-0.6□□□□□ -2.51
VSX2P58304 SNORD114-14-201ENST00000362723 75 ntBASIC-0.61□□□□□ -2.51
VSX2P58304 Y_RNA.337-201ENST00000365312 102 ntBASIC-0.61□□□□□ -2.51
VSX2P58304 RNU6-735P-201ENST00000410612 107 ntBASIC-0.61□□□□□ -2.51
VSX2P58304 AL161932.1-201ENST00000437408 146 ntBASIC-0.61□□□□□ -2.51
VSX2P58304 RNU6-1219P-201ENST00000516143 112 ntBASIC-0.61□□□□□ -2.51
VSX2P58304 RNU6-287P-201ENST00000516230 98 ntBASIC-0.61□□□□□ -2.51
VSX2P58304 AP001094.1-201ENST00000579805 193 ntBASIC-0.61□□□□□ -2.51
VSX2P58304 MIR3128-201ENST00000581957 66 ntBASIC-0.61□□□□□ -2.51
VSX2P58304 RNU4-84P-201ENST00000364200 139 ntBASIC-0.62□□□□□ -2.51
VSX2P58304 Y_RNA.326-201ENST00000365176 113 ntBASIC-0.62□□□□□ -2.51
VSX2P58304 MIR606-201ENST00000384851 96 ntBASIC-0.62□□□□□ -2.51
VSX2P58304 MIR568-201ENST00000385036 95 ntBASIC-0.62□□□□□ -2.51
VSX2P58304 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.62□□□□□ -2.51
VSX2P58304 MIR2113-201ENST00000459007 91 ntBASIC-0.62□□□□□ -2.51
VSX2P58304 snoU13.19-201ENST00000459148 104 ntBASIC-0.62□□□□□ -2.51
VSX2P58304 AC107027.2-201ENST00000512197 115 ntBASIC-0.62□□□□□ -2.51
VSX2P58304 Y_RNA.690-201ENST00000516603 95 ntBASIC-0.62□□□□□ -2.51
VSX2P58304 AC022559.1-201ENST00000520905 205 ntBASIC-0.62□□□□□ -2.51
VSX2P58304 AL137067.1-201ENST00000615933 120 ntBASIC-0.62□□□□□ -2.51
VSX2P58304 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.63□□□□□ -2.51
VSX2P58304 RNU6-521P-201ENST00000516663 105 ntBASIC-0.63□□□□□ -2.51
VSX2P58304 RNU7-6P-201ENST00000516845 62 ntBASIC-0.63□□□□□ -2.51
VSX2P58304 MIR4460-201ENST00000577862 86 ntBASIC-0.63□□□□□ -2.51
VSX2P58304 AC096720.1-201ENST00000604441 183 ntBASIC-0.63□□□□□ -2.51
VSX2P58304 RNU6-312P-201ENST00000364629 107 ntBASIC-0.64□□□□□ -2.51
VSX2P58304 SNORD18B-201ENST00000365659 72 ntBASIC-0.64□□□□□ -2.51
VSX2P58304 MIR539-201ENST00000365690 78 ntBASIC-0.64□□□□□ -2.51
VSX2P58304 SNORA51.5-201ENST00000384126 131 ntBASIC-0.64□□□□□ -2.51
VSX2P58304 MIR224-201ENST00000384889 81 ntBASIC-0.64□□□□□ -2.51
VSX2P58304 AC074198.2-201ENST00000508153 258 ntBASIC-0.64□□□□□ -2.51
VSX2P58304 RNU5E-3P-201ENST00000515913 68 ntBASIC-0.64□□□□□ -2.51
VSX2P58304 RNU6-111P-201ENST00000517179 105 ntBASIC-0.64□□□□□ -2.51
VSX2P58304 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-0.64□□□□□ -2.51
VSX2P58304 Y_RNA.435-201ENST00000384095 112 ntBASIC-0.65□□□□□ -2.51
VSX2P58304 IGKV1-22-201ENST00000524313 326 ntBASIC-0.65□□□□□ -2.51
VSX2P58304 MIR3646-201ENST00000578301 84 ntBASIC-0.65□□□□□ -2.51
VSX2P58304 RNU6-1163P-201ENST00000364516 107 ntBASIC-0.66□□□□□ -2.52
VSX2P58304 Y_RNA.459-201ENST00000384251 102 ntBASIC-0.66□□□□□ -2.52
VSX2P58304 RNU6-154P-201ENST00000384306 106 ntBASIC-0.66□□□□□ -2.52
VSX2P58304 Y_RNA.584-201ENST00000391090 114 ntBASIC-0.66□□□□□ -2.52
VSX2P58304 RNU4-63P-201ENST00000411313 118 ntBASIC-0.66□□□□□ -2.52
VSX2P58304 AP001328.1-201ENST00000528550 176 ntBASIC-0.66□□□□□ -2.52
VSX2P58304 MTRNR2L2-201ENST00000604882 87 ntBASIC-0.66□□□□□ -2.52
VSX2P58304 U4.1-201ENST00000620349 87 ntBASIC-0.66□□□□□ -2.52
VSX2P58304 AC021753.1-201ENST00000635724 168 ntBASIC-0.66□□□□□ -2.52
VSX2P58304 SNORD36A-201ENST00000362874 73 ntBASIC-0.67□□□□□ -2.52
VSX2P58304 Y_RNA.145-201ENST00000363527 102 ntBASIC-0.67□□□□□ -2.52
VSX2P58304 Y_RNA.149-201ENST00000363558 117 ntBASIC-0.67□□□□□ -2.52
VSX2P58304 SNORD114-29-201ENST00000364819 70 ntBASIC-0.67□□□□□ -2.52
VSX2P58304 SNORD115-44-201ENST00000365391 82 ntBASIC-0.67□□□□□ -2.52
VSX2P58304 Y_RNA.447-201ENST00000384184 113 ntBASIC-0.67□□□□□ -2.52
VSX2P58304 MT-TY-201ENST00000387409 66 ntBASIC-0.67□□□□□ -2.52
VSX2P58304 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.67□□□□□ -2.52
VSX2P58304 Y_RNA.604-201ENST00000410574 102 ntBASIC-0.67□□□□□ -2.52
VSX2P58304 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.67□□□□□ -2.52
VSX2P58304 Y_RNA.668-201ENST00000516233 93 ntBASIC-0.67□□□□□ -2.52
VSX2P58304 RNU4-71P-201ENST00000516258 113 ntBASIC-0.67□□□□□ -2.52
VSX2P58304 RNU7-121P-201ENST00000516604 62 ntBASIC-0.67□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 873.6 ms