Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 Y_RNA.309-201ENST00000365046 111 ntBASIC0.48□□□□□ -2.33
CLDN2P57739 MIR193B-201ENST00000384907 83 ntBASIC0.48□□□□□ -2.33
CLDN2P57739 MIR548A3-201ENST00000385297 97 ntBASIC0.48□□□□□ -2.33
CLDN2P57739 AC114737.2-201ENST00000421583 173 ntBASIC0.48□□□□□ -2.33
CLDN2P57739 BX276092.1-201ENST00000427368 251 ntBASIC0.48□□□□□ -2.33
CLDN2P57739 SNRPGP12-201ENST00000449481 213 ntBASIC0.48□□□□□ -2.33
CLDN2P57739 SNORD33.1-201ENST00000516213 88 ntBASIC0.48□□□□□ -2.33
CLDN2P57739 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.48□□□□□ -2.33
CLDN2P57739 AL670379.3-201ENST00000605040 251 ntBASIC0.48□□□□□ -2.33
CLDN2P57739 MIR6828-201ENST00000636181 60 ntBASIC0.48□□□□□ -2.33
CLDN2P57739 RNU6-170P-201ENST00000362832 104 ntBASIC0.47□□□□□ -2.33
CLDN2P57739 SNORA36.1-201ENST00000363424 132 ntBASIC0.47□□□□□ -2.33
CLDN2P57739 MIR518A1-201ENST00000385068 85 ntBASIC0.47□□□□□ -2.33
CLDN2P57739 MIR519A1-201ENST00000385257 85 ntBASIC0.47□□□□□ -2.33
CLDN2P57739 AC097635.1-201ENST00000450678 155 ntBASIC0.47□□□□□ -2.33
CLDN2P57739 RNA5SP268-201ENST00000516828 124 ntBASIC0.47□□□□□ -2.33
CLDN2P57739 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.47□□□□□ -2.33
CLDN2P57739 AC091304.10-201ENST00000641554 121 ntBASIC0.47□□□□□ -2.33
CLDN2P57739 SNORD118-201ENST00000363593 134 ntBASIC0.46□□□□□ -2.34
CLDN2P57739 SNORD38.1-201ENST00000363863 68 ntBASIC0.46□□□□□ -2.34
CLDN2P57739 Y_RNA.353-201ENST00000365440 108 ntBASIC0.46□□□□□ -2.34
CLDN2P57739 TRAJ51-201ENST00000504127 63 ntBASIC0.46□□□□□ -2.34
CLDN2P57739 MTND5P40-201ENST00000559945 246 ntBASIC0.46□□□□□ -2.34
CLDN2P57739 MIR3910-1-201ENST00000580936 111 ntBASIC0.46□□□□□ -2.34
CLDN2P57739 uc_338.17-201ENST00000619633 179 ntBASIC0.46□□□□□ -2.34
CLDN2P57739 AC244669.1-204ENST00000621564 178 ntBASIC0.46□□□□□ -2.34
CLDN2P57739 AC132825.6-201ENST00000638861 357 ntBASIC0.46□□□□□ -2.34
CLDN2P57739 SNORD115-24-201ENST00000363528 82 ntBASIC0.45□□□□□ -2.34
CLDN2P57739 AL353813.1-201ENST00000440700 253 ntBASIC0.45□□□□□ -2.34
CLDN2P57739 RNU6-1006P-201ENST00000516998 103 ntBASIC0.45□□□□□ -2.34
CLDN2P57739 AC010487.4-201ENST00000637027 61 ntBASIC0.45□□□□□ -2.34
CLDN2P57739 RNU6-1099P-201ENST00000363533 107 ntBASIC0.44□□□□□ -2.34
CLDN2P57739 Y_RNA.342-201ENST00000365352 113 ntBASIC0.44□□□□□ -2.34
CLDN2P57739 RNU6-1201P-201ENST00000384227 107 ntBASIC0.44□□□□□ -2.34
CLDN2P57739 RNU6-1117P-201ENST00000384525 104 ntBASIC0.44□□□□□ -2.34
CLDN2P57739 SNORD63B-201ENST00000411005 70 ntBASIC0.44□□□□□ -2.34
CLDN2P57739 RNA5SP227-201ENST00000516184 113 ntBASIC0.44□□□□□ -2.34
CLDN2P57739 RNU6-62P-201ENST00000516526 102 ntBASIC0.44□□□□□ -2.34
CLDN2P57739 RNU6-850P-201ENST00000516934 103 ntBASIC0.44□□□□□ -2.34
CLDN2P57739 MIR1273G-201ENST00000577677 100 ntBASIC0.44□□□□□ -2.34
CLDN2P57739 AL035470.1-201ENST00000622571 220 ntBASIC0.44□□□□□ -2.34
CLDN2P57739 Y_RNA.49-201ENST00000362714 112 ntBASIC0.43□□□□□ -2.34
CLDN2P57739 MIR548A1-201ENST00000385041 97 ntBASIC0.43□□□□□ -2.34
CLDN2P57739 RNU6-863P-201ENST00000515989 104 ntBASIC0.43□□□□□ -2.34
CLDN2P57739 SNORA25.18-201ENST00000607153 114 ntBASIC0.43□□□□□ -2.34
CLDN2P57739 AC243829.6-201ENST00000612652 106 ntBASIC0.43□□□□□ -2.34
CLDN2P57739 AL442128.1-201ENST00000615151 90 ntBASIC0.43□□□□□ -2.34
CLDN2P57739 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
CLDN2P57739 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.42□□□□□ -2.34
CLDN2P57739 Y_RNA.377-201ENST00000365644 108 ntBASIC0.42□□□□□ -2.34
CLDN2P57739 RNU6-880P-201ENST00000384526 107 ntBASIC0.42□□□□□ -2.34
CLDN2P57739 MIR599-201ENST00000385069 95 ntBASIC0.42□□□□□ -2.34
CLDN2P57739 MIR548G-201ENST00000408442 89 ntBASIC0.42□□□□□ -2.34
CLDN2P57739 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.42□□□□□ -2.34
CLDN2P57739 SPINT5P-201ENST00000448174 155 ntBASIC0.42□□□□□ -2.34
CLDN2P57739 SNORA68.3-201ENST00000515906 83 ntBASIC0.42□□□□□ -2.34
CLDN2P57739 AC096720.1-201ENST00000604441 183 ntBASIC0.42□□□□□ -2.34
CLDN2P57739 RNU6-90P-201ENST00000606352 106 ntBASIC0.42□□□□□ -2.34
CLDN2P57739 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.42□□□□□ -2.34
CLDN2P57739 AC090625.1-201ENST00000357130 210 ntBASIC0.41□□□□□ -2.34
CLDN2P57739 MIRLET7D-201ENST00000362263 87 ntBASIC0.41□□□□□ -2.34
CLDN2P57739 RNU6-412P-201ENST00000516434 106 ntBASIC0.41□□□□□ -2.34
CLDN2P57739 AC068339.1-201ENST00000526965 141 ntBASIC0.41□□□□□ -2.34
CLDN2P57739 MIR4694-201ENST00000578534 80 ntBASIC0.41□□□□□ -2.34
CLDN2P57739 MIR7107-201ENST00000611489 80 ntBASIC0.41□□□□□ -2.34
CLDN2P57739 Y_RNA.35-201ENST00000362601 101 ntBASIC0.4□□□□□ -2.35
CLDN2P57739 RNA5SP403-201ENST00000363598 108 ntBASIC0.4□□□□□ -2.35
CLDN2P57739 Y_RNA.261-201ENST00000364631 102 ntBASIC0.4□□□□□ -2.35
CLDN2P57739 Y_RNA.281-201ENST00000364774 94 ntBASIC0.4□□□□□ -2.35
CLDN2P57739 RNU6-22P-201ENST00000384355 107 ntBASIC0.4□□□□□ -2.35
CLDN2P57739 Y_RNA.549-201ENST00000384657 102 ntBASIC0.4□□□□□ -2.35
CLDN2P57739 RNU2-59P-201ENST00000410482 191 ntBASIC0.4□□□□□ -2.35
CLDN2P57739 Y_RNA.809-201ENST00000516058 95 ntBASIC0.4□□□□□ -2.35
CLDN2P57739 AL365222.1-201ENST00000614661 98 ntBASIC0.4□□□□□ -2.35
CLDN2P57739 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.4□□□□□ -2.35
CLDN2P57739 RNU6-1260P-201ENST00000362944 107 ntBASIC0.39□□□□□ -2.35
CLDN2P57739 SNORA50A-201ENST00000384225 134 ntBASIC0.39□□□□□ -2.35
CLDN2P57739 SNORD116-21-201ENST00000384507 92 ntBASIC0.39□□□□□ -2.35
CLDN2P57739 RNU6-1168P-201ENST00000390831 104 ntBASIC0.39□□□□□ -2.35
CLDN2P57739 RNU7-195P-201ENST00000458793 62 ntBASIC0.39□□□□□ -2.35
CLDN2P57739 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.39□□□□□ -2.35
CLDN2P57739 RNU7-161P-201ENST00000517289 62 ntBASIC0.39□□□□□ -2.35
CLDN2P57739 MIR5009-201ENST00000578736 100 ntBASIC0.39□□□□□ -2.35
CLDN2P57739 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.38□□□□□ -2.35
CLDN2P57739 SNORD44.1-201ENST00000363202 61 ntBASIC0.38□□□□□ -2.35
CLDN2P57739 Y_RNA.173-201ENST00000363776 113 ntBASIC0.38□□□□□ -2.35
CLDN2P57739 Y_RNA.247-201ENST00000364500 92 ntBASIC0.38□□□□□ -2.35
CLDN2P57739 U8.6-201ENST00000364939 135 ntBASIC0.38□□□□□ -2.35
CLDN2P57739 SNORD113-1-201ENST00000365321 69 ntBASIC0.38□□□□□ -2.35
CLDN2P57739 VTRNA1-3-201ENST00000365645 89 ntBASIC0.38□□□□□ -2.35
CLDN2P57739 RNU6-479P-201ENST00000516348 105 ntBASIC0.38□□□□□ -2.35
CLDN2P57739 AC067863.3-201ENST00000624172 122 ntBASIC0.38□□□□□ -2.35
CLDN2P57739 RNU6-834P-201ENST00000362367 110 ntBASIC0.37□□□□□ -2.35
CLDN2P57739 RNY3P2-201ENST00000362918 102 ntBASIC0.37□□□□□ -2.35
CLDN2P57739 Y_RNA.221-201ENST00000364248 96 ntBASIC0.37□□□□□ -2.35
CLDN2P57739 RNA5SP205-201ENST00000364653 136 ntBASIC0.37□□□□□ -2.35
CLDN2P57739 RNU6-726P-201ENST00000364680 107 ntBASIC0.37□□□□□ -2.35
CLDN2P57739 RNU6-1126P-201ENST00000384002 107 ntBASIC0.37□□□□□ -2.35
CLDN2P57739 MIR577-201ENST00000385196 96 ntBASIC0.37□□□□□ -2.35
CLDN2P57739 MIR548L-201ENST00000408303 86 ntBASIC0.37□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 188.1 ms