Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 RNU4-58P-201ENST00000363192 141 ntBASIC0.43□□□□□ -2.34
RIPK4P57078 SNORA36.1-201ENST00000363424 132 ntBASIC0.43□□□□□ -2.34
RIPK4P57078 RNA5SP205-201ENST00000364653 136 ntBASIC0.43□□□□□ -2.34
RIPK4P57078 RNU6-816P-201ENST00000390914 107 ntBASIC0.43□□□□□ -2.34
RIPK4P57078 RNU6-1268P-201ENST00000391214 107 ntBASIC0.43□□□□□ -2.34
RIPK4P57078 RNU6-1239P-201ENST00000391310 107 ntBASIC0.43□□□□□ -2.34
RIPK4P57078 TRAJ51-201ENST00000504127 63 ntBASIC0.43□□□□□ -2.34
RIPK4P57078 MIR4679-2-201ENST00000578358 77 ntBASIC0.43□□□□□ -2.34
RIPK4P57078 AL162726.3-218ENST00000636401 95 ntBASIC0.43□□□□□ -2.34
RIPK4P57078 Y_RNA.35-201ENST00000362601 101 ntBASIC0.42□□□□□ -2.34
RIPK4P57078 RNA5SP117-201ENST00000365294 118 ntBASIC0.42□□□□□ -2.34
RIPK4P57078 Y_RNA.433-201ENST00000384089 102 ntBASIC0.42□□□□□ -2.34
RIPK4P57078 SNORA50A-201ENST00000384225 134 ntBASIC0.42□□□□□ -2.34
RIPK4P57078 RNU6-1117P-201ENST00000384525 104 ntBASIC0.42□□□□□ -2.34
RIPK4P57078 SNORA19-201ENST00000384737 128 ntBASIC0.42□□□□□ -2.34
RIPK4P57078 MIR548A3-201ENST00000385297 97 ntBASIC0.42□□□□□ -2.34
RIPK4P57078 RNU4-61P-201ENST00000411243 107 ntBASIC0.42□□□□□ -2.34
RIPK4P57078 AC008267.6-201ENST00000441664 139 ntBASIC0.42□□□□□ -2.34
RIPK4P57078 RNU7-106P-201ENST00000459514 67 ntBASIC0.42□□□□□ -2.34
RIPK4P57078 RNU6-1194P-201ENST00000516208 104 ntBASIC0.42□□□□□ -2.34
RIPK4P57078 SNORA62.5-201ENST00000516634 120 ntBASIC0.42□□□□□ -2.34
RIPK4P57078 AP003327.1-201ENST00000529684 127 ntBASIC0.42□□□□□ -2.34
RIPK4P57078 AP001362.1-201ENST00000625165 124 ntBASIC0.42□□□□□ -2.34
RIPK4P57078 U6.95-201ENST00000636931 70 ntBASIC0.42□□□□□ -2.34
RIPK4P57078 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC0.42□□□□□ -2.34
RIPK4P57078 RNU6-1313P-201ENST00000362622 102 ntBASIC0.41□□□□□ -2.34
RIPK4P57078 Y_RNA.56-201ENST00000362798 112 ntBASIC0.41□□□□□ -2.34
RIPK4P57078 Y_RNA.155-201ENST00000363632 101 ntBASIC0.41□□□□□ -2.34
RIPK4P57078 RNU6-865P-201ENST00000364772 107 ntBASIC0.41□□□□□ -2.34
RIPK4P57078 RNU4-45P-201ENST00000365469 141 ntBASIC0.41□□□□□ -2.34
RIPK4P57078 RNU6-409P-201ENST00000384114 104 ntBASIC0.41□□□□□ -2.34
RIPK4P57078 MIR577-201ENST00000385196 96 ntBASIC0.41□□□□□ -2.34
RIPK4P57078 RPL39P34-201ENST00000477141 156 ntBASIC0.41□□□□□ -2.34
RIPK4P57078 AC068339.1-201ENST00000526965 141 ntBASIC0.41□□□□□ -2.34
RIPK4P57078 AL670379.3-201ENST00000605040 251 ntBASIC0.41□□□□□ -2.34
RIPK4P57078 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.41□□□□□ -2.34
RIPK4P57078 U2.22-201ENST00000636441 106 ntBASIC0.41□□□□□ -2.34
RIPK4P57078 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.4□□□□□ -2.34
RIPK4P57078 RNA5SP517-201ENST00000364724 117 ntBASIC0.4□□□□□ -2.35
RIPK4P57078 U8.6-201ENST00000364939 135 ntBASIC0.4□□□□□ -2.35
RIPK4P57078 MIR140-201ENST00000385282 100 ntBASIC0.4□□□□□ -2.35
RIPK4P57078 RNU6-1154P-201ENST00000391001 104 ntBASIC0.4□□□□□ -2.35
RIPK4P57078 RNA5SP94-201ENST00000516917 108 ntBASIC0.4□□□□□ -2.35
RIPK4P57078 MIR6129-201ENST00000616087 109 ntBASIC0.4□□□□□ -2.35
RIPK4P57078 AL512310.12-203ENST00000640543 90 ntBASIC0.4□□□□□ -2.35
RIPK4P57078 MIR101-2-201ENST00000362195 79 ntBASIC0.39□□□□□ -2.35
RIPK4P57078 RNU6-1201P-201ENST00000384227 107 ntBASIC0.39□□□□□ -2.35
RIPK4P57078 RNU6-1144P-201ENST00000384247 104 ntBASIC0.39□□□□□ -2.35
RIPK4P57078 SNORD116-21-201ENST00000384507 92 ntBASIC0.39□□□□□ -2.35
RIPK4P57078 RNU6-479P-201ENST00000516348 105 ntBASIC0.39□□□□□ -2.35
RIPK4P57078 RNU6-1018P-201ENST00000516577 106 ntBASIC0.39□□□□□ -2.35
RIPK4P57078 RNU6-850P-201ENST00000516934 103 ntBASIC0.39□□□□□ -2.35
RIPK4P57078 Y_RNA.49-201ENST00000362714 112 ntBASIC0.38□□□□□ -2.35
RIPK4P57078 RNU6-1099P-201ENST00000363533 107 ntBASIC0.38□□□□□ -2.35
RIPK4P57078 Y_RNA.281-201ENST00000364774 94 ntBASIC0.38□□□□□ -2.35
RIPK4P57078 SNORD28-201ENST00000384706 75 ntBASIC0.38□□□□□ -2.35
RIPK4P57078 SNRPGP12-201ENST00000449481 213 ntBASIC0.38□□□□□ -2.35
RIPK4P57078 SNORA68.3-201ENST00000515906 83 ntBASIC0.38□□□□□ -2.35
RIPK4P57078 RNU6-62P-201ENST00000516526 102 ntBASIC0.38□□□□□ -2.35
RIPK4P57078 RNU6-789P-201ENST00000517105 102 ntBASIC0.38□□□□□ -2.35
RIPK4P57078 MIR5009-201ENST00000578736 100 ntBASIC0.38□□□□□ -2.35
RIPK4P57078 AL442128.1-201ENST00000615151 90 ntBASIC0.38□□□□□ -2.35
RIPK4P57078 RNU6-1163P-201ENST00000364516 107 ntBASIC0.37□□□□□ -2.35
RIPK4P57078 Y_RNA.309-201ENST00000365046 111 ntBASIC0.37□□□□□ -2.35
RIPK4P57078 Y_RNA.507-201ENST00000384500 99 ntBASIC0.37□□□□□ -2.35
RIPK4P57078 RNU6-476P-201ENST00000384726 107 ntBASIC0.37□□□□□ -2.35
RIPK4P57078 MIR635-201ENST00000384830 98 ntBASIC0.37□□□□□ -2.35
RIPK4P57078 MIR516A2-201ENST00000384888 90 ntBASIC0.37□□□□□ -2.35
RIPK4P57078 MIR516A1-201ENST00000385033 90 ntBASIC0.37□□□□□ -2.35
RIPK4P57078 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.37□□□□□ -2.35
RIPK4P57078 RNU6-1064P-201ENST00000410626 104 ntBASIC0.37□□□□□ -2.35
RIPK4P57078 SNORA19.1-201ENST00000410656 129 ntBASIC0.37□□□□□ -2.35
RIPK4P57078 RNU2-51P-201ENST00000410708 197 ntBASIC0.37□□□□□ -2.35
RIPK4P57078 SNORD63B-201ENST00000411005 70 ntBASIC0.37□□□□□ -2.35
RIPK4P57078 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.37□□□□□ -2.35
RIPK4P57078 AC244505.6-201ENST00000452829 130 ntBASIC0.37□□□□□ -2.35
RIPK4P57078 RNU7-195P-201ENST00000458793 62 ntBASIC0.37□□□□□ -2.35
RIPK4P57078 RNA5SP47-201ENST00000517230 109 ntBASIC0.37□□□□□ -2.35
RIPK4P57078 RNU7-161P-201ENST00000517289 62 ntBASIC0.37□□□□□ -2.35
RIPK4P57078 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.37□□□□□ -2.35
RIPK4P57078 MIR548Z-201ENST00000584743 97 ntBASIC0.37□□□□□ -2.35
RIPK4P57078 AC244669.1-204ENST00000621564 178 ntBASIC0.37□□□□□ -2.35
RIPK4P57078 AC091304.10-201ENST00000641554 121 ntBASIC0.37□□□□□ -2.35
RIPK4P57078 RNU6-1290P-201ENST00000362957 109 ntBASIC0.36□□□□□ -2.35
RIPK4P57078 RNU6-832P-201ENST00000363319 107 ntBASIC0.36□□□□□ -2.35
RIPK4P57078 Y_RNA.173-201ENST00000363776 113 ntBASIC0.36□□□□□ -2.35
RIPK4P57078 Y_RNA.174-201ENST00000363781 105 ntBASIC0.36□□□□□ -2.35
RIPK4P57078 RNU6-1107P-201ENST00000364817 104 ntBASIC0.36□□□□□ -2.35
RIPK4P57078 RNU6-1014P-201ENST00000383940 103 ntBASIC0.36□□□□□ -2.35
RIPK4P57078 Y_RNA.567-201ENST00000384736 106 ntBASIC0.36□□□□□ -2.35
RIPK4P57078 MIR548G-201ENST00000408442 89 ntBASIC0.36□□□□□ -2.35
RIPK4P57078 MIR1912-201ENST00000410389 80 ntBASIC0.36□□□□□ -2.35
RIPK4P57078 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.36□□□□□ -2.35
RIPK4P57078 RNU6-313P-201ENST00000516317 112 ntBASIC0.36□□□□□ -2.35
RIPK4P57078 RNA5SP395-201ENST00000516567 118 ntBASIC0.36□□□□□ -2.35
RIPK4P57078 MIR548H5-201ENST00000580314 60 ntBASIC0.36□□□□□ -2.35
RIPK4P57078 SNORA25.18-201ENST00000607153 114 ntBASIC0.36□□□□□ -2.35
RIPK4P57078 MIR6828-201ENST00000636181 60 ntBASIC0.36□□□□□ -2.35
RIPK4P57078 SNORD115-24-201ENST00000363528 82 ntBASIC0.35□□□□□ -2.35
RIPK4P57078 SNORD38.1-201ENST00000363863 68 ntBASIC0.35□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 178.6 ms